RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MIAQ16674 131 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC01556Q5JQF7 62 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 CD164L2Q6UWJ8 174 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC01561Q8N1V8 128 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 C10orf126Q8N4M7 172 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 RMI2Q96E14 147 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 TENM1Q9UKZ4 2725 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A0U1RRA0 63 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1B0GV90 55 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 TIMM17BO60830 172 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SMIM13P0DJ93 91 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 FXYD2P54710 66 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 NPC2P61916 151 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPAG11BQ08648 103 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q1RN00 199 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q6ZVH6 145 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q8IZM0 81 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPANXDQ9BXN6 97 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q9HAA7 133 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 K7ERJ3 54 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 IFITM1P13164 125 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00158P58513 81 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 VAMP3Q15836 100 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 LYRM7Q5U5X0 104 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 UPK3BQ9BT76 320 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 IBA57-AS1B1ANH7 110 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 H3BUT2 72 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 K7EP13 123 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 TAX1BP3O14907 124 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 PSCAO43653 123 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 PFN2P35080 140 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 TTC32Q5I0X7 151 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 MUSTN1Q8IVN3 82 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 DAND5Q8N907 189 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 CAMK2N2Q96S95 79 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 ERG28Q9UKR5 140 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 NIPBLQ6KC79 2804 aaeCLIP2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 MAST4O15021 2626 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 RPL37AP8A6NKH3 93 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 H7C2G1 150 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 FABP2P12104 132 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 RPL13AP40429 203 aaKnown RBP2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 PSMB2P49721 201 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 C2orf82Q6UX34 121 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 GTF2H5Q6ZYL4 71 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 NAA38Q9BRA0 125 aaKnown RBP2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 PRO1854Q9UHT4 67 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 VWFP04275 2813 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 STAB1Q9NY15 2570 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1B0GWB2 263 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1W2PPM0 123 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 F8WDY8 70 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 TSPAN13O95857 204 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 COX17Q14061 63 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 ARL17AQ8IVW1 177 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 C6orf223Q8N319 242 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 C15orf56Q8N910 161 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00526Q96FQ7 95 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 PPDPFQ9H3Y8 114 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPCS1Q9Y6A9 102 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 GVQW2A0A096LPI5 108 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRAV13-2A0A0B4J235 113 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRBV30A0A0K0K1B3 111 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 K7EP34 96 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 RTL8CO15255 209 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 COX6CP09669 75 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SCGB1C2P0DMR2 95 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SYCNQ0VAF6 134 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SOSTDC1Q6X4U4 206 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 Q6ZRU5 148 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 OR13C6PQ8NH95 151 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 CARD19Q96LW7 228 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 C6orf48Q9UBA6 75 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 NBDYA0A0U1RRE5 68 aa2.45□□□□□ -2.02
HMGB3P20-201ENST00000417997 NCR3O14931 201 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms