RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 MALRD1Q5VYJ5 2156 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 DMDP11532 3685 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 SETD2Q9BYW2 2564 aaPredicted RBP1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGLV1-50A0A075B6I6 118 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 A0A1B0GVX0 72 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRBV6-4A0A1B0GX49 114 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 A6NN06 94 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 A8MTW9 85 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 TMEM256-PLSCR3K7ERE1 68 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 M0R1B8 84 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 LECT2O14960 151 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 CRPP02741 224 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 PDE6GP18545 87 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 CCL18P55774 89 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 SYCNQ0VAF6 134 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB116Q30KQ4 102 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 MINOS1Q5TGZ0 78 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q6ZTI0 123 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 MRPL55Q7Z7F7 128 aaKnown RBP1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q8N814 137 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 DYNLRB2Q8TF09 96 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB104AQ8WTQ1 72 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 CYP4F30PQ9H0H9 118 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 C11orf68Q9H3H3 251 aaKnown RBP1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 WDFY3Q8IZQ1 3526 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 ZNF292O60281 2723 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 PTPN13Q12923 2485 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 CADP27708 2225 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 FREM2Q5SZK8 3169 aa1.48□□□□□ -2.17
HMGB3P2-201ENST00000411913 VPS13AQ96RL7 3174 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 FAM186AA6NE01 2351 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3OR16-8A0A075B7F1 116 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 TRAV22A0A0B4J277 110 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 H3BQ85 93 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 M0R2N4 97 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 NDUFA4O00483 81 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 BPY2O14599 106 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 NDUFS5O43920 106 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 IGHV3-53P01767 116 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 FUSP35637 526 aaKnown RBP eCLIP1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB1P60022 68 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 DAD1P61803 113 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 NREPQ16612 68 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 DEFB114Q30KQ6 69 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 Q5VV11 94 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 CLEC19AQ6UXS0 136 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 ATP11AUNQ6ZP68 121 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 CNEP1R1Q8N9A8 125 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 UBE2E2Q96LR5 201 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 LINC00467Q9BRT7 94 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 SND1-IT1Q9HBX3 110 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 CDC42SE2Q9NRR3 84 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 KLK12Q9UKR0 248 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 PLCE1Q9P212 2302 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 PRRC2CQ9Y520 2896 aaKnown RBP1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 CDH23Q9H251 3354 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 ABCA12Q86UK0 2595 aa1.47□□□□□ -2.17
HMGB3P2-201ENST00000411913 CACNA1EQ15878 2313 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 ZGRF1Q86YA3 2104 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 AKAP13Q12802 2813 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 HELZ2Q9BYK8 2649 aaKnown RBP1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 SMG1Q96Q15 3661 aaKnown RBP1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 TACC2O95359 2948 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 TRBV6-8A0A0A6YYG3 113 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 C16orf90A8MZG2 172 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 C19orf84I3L1E1 186 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 PSCAO43653 123 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGKV4-1P06312 121 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 UBE2BP63146 152 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 RNASE13Q5GAN3 156 aaKnown RBP1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 FAM74A4Q5TZK3 123 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 LINC00575Q6W349 94 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 NTM-AS1Q6ZSK4 140 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 C1orf64Q8NEQ6 169 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 COX7B2Q8TF08 81 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 DIRC1Q969H9 104 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 CAMK2N2Q96S95 79 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 FAM215AQ9Y5M1 114 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 MINOS1-NBL1R4GNA1 71 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 CELSR3Q9NYQ7 3312 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 ARHGAP32A7KAX9 2087 aa1.46□□□□□ -2.18
HMGB3P2-201ENST00000411913 SPENQ96T58 3664 aaKnown RBP1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 SPEGQ15772 3267 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 MYO15AQ9UKN7 3530 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGHV3-49A0A0A0MS15 119 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 IGHV3OR16-9A0A0B4J2B5 98 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 LOC101927531A0A1B0GV80 90 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 C8orf87E5RJ46 101 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 H3BUA1 57 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 ELOF1P60002 83 aaKnown RBP1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 PRB3Q04118 309 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 LCA10Q71F78 164 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 TMEM105Q8N8V8 129 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 MUC7Q8TAX7 377 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 HIGD2AQ9BW72 106 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 PLAC8Q9NZF1 115 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 MGAQ8IWI9 3026 aa1.45□□□□□ -2.18
HMGB3P2-201ENST00000411913 PIEZO2Q9H5I5 2752 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms