RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 INSL4Q14641 139 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 IFI27L1Q96BM0 104 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 CADP27708 2225 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 STAB2Q8WWQ8 2551 aa2.19□□□□□ -2.06
LSM5-206ENST00000409987 DOCK10Q96BY6 2186 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 CCKP06307 115 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 S100A10P60903 97 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 RBM3P98179 157 aaKnown RBP2.18□□□□□ -2.06
LSM5-206ENST00000409987 UNQ6190/PRO20217Q6UXQ8 127 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 C5orf38Q86SI9 138 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
LSM5-206ENST00000409987 HECTD4Q9Y4D8 3996 aa2.18□□□□□ -2.06
LSM5-206ENST00000409987 SPATA45Q537H7 98 aa2.17□□□□□ -2.06
LSM5-206ENST00000409987 GDF5OSQ5U4N7 250 aa2.17□□□□□ -2.06
LSM5-206ENST00000409987 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
LSM5-206ENST00000409987 TCHHQ07283 1943 aa2.17□□□□□ -2.06
LSM5-206ENST00000409987 TRAV12-3A0A0B4J271 114 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 HIGD1CA8MV81 97 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 TMEM262E9PQX1 116 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 GNG2P59768 71 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 C6orf52Q5T4I8 152 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 ZNF720Q7Z2F6 126 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 FREM1Q5H8C1 2179 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 ALPK2Q86TB3 2170 aa2.16□□□□□ -2.06
LSM5-206ENST00000409987 STARD9Q9P2P6 4700 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 TRBV6-7A0A0A0MS04 114 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 TRBV10-3A0A0K0K1G6 114 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 COL5A1-AS1Q5SY13 56 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 SBSPONQ8IVN8 264 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 C4orf33Q8N1A6 199 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 DPH3P1Q9H4G8 78 aa2.15□□□□□ -2.07
LSM5-206ENST00000409987 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 SSSCA1O60232 199 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 MPC2O95563 127 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 STATHP02808 62 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 RPL37AP61513 92 aaKnown RBP2.14□□□□□ -2.07
LSM5-206ENST00000409987 UBE2L3P68036 154 aaKnown RBP2.14□□□□□ -2.07
LSM5-206ENST00000409987 DCDP81605 110 aaKnown RBP2.14□□□□□ -2.07
LSM5-206ENST00000409987 C10orf82Q8WW14 230 aa2.14□□□□□ -2.07
LSM5-206ENST00000409987 ATP5EP56381 51 aaPredicted RBP2.13□□□□□ -2.07
LSM5-206ENST00000409987 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
LSM5-206ENST00000409987 CCL8P80075 99 aa2.13□□□□□ -2.07
LSM5-206ENST00000409987 COMMD6Q7Z4G1 85 aa2.13□□□□□ -2.07
LSM5-206ENST00000409987 CCL19Q99731 98 aa2.13□□□□□ -2.07
LSM5-206ENST00000409987 SNHG12Q9BXW3 62 aa2.13□□□□□ -2.07
LSM5-206ENST00000409987 SPTBP11277 2137 aa2.12□□□□□ -2.07
LSM5-206ENST00000409987 HEATR1Q9H583 2144 aaKnown RBP2.12□□□□□ -2.07
LSM5-206ENST00000409987 TEX49A0A1B0GTD5 131 aa2.12□□□□□ -2.07
LSM5-206ENST00000409987 H3BQ15 152 aa2.12□□□□□ -2.07
LSM5-206ENST00000409987 FXYD4P59646 89 aa2.12□□□□□ -2.07
LSM5-206ENST00000409987 AMELYQ99218 206 aa2.12□□□□□ -2.07
LSM5-206ENST00000409987 MED12Q93074 2177 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 A0A096LNT2 108 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 TRAV13-2A0A0B4J235 113 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 HCG22E2RYF7 251 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 PIN1P1O15428 100 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 ZNF818PQ6ZRF7 136 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 CYP2G1PQ6ZSU1 146 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 OBSCN-AS1Q96MR7 158 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 HUWE1Q7Z6Z7 4374 aaKnown RBP2.11□□□□□ -2.07
LSM5-206ENST00000409987 DNAJC13O75165 2243 aa2.11□□□□□ -2.07
LSM5-206ENST00000409987 DYNC1H1Q14204 4646 aaKnown RBP2.1□□□□□ -2.07
LSM5-206ENST00000409987 LOC101927531A0A1B0GV80 90 aa2.1□□□□□ -2.07
LSM5-206ENST00000409987 PVALEFA0A1B0GWK0 134 aa2.1□□□□□ -2.07
LSM5-206ENST00000409987 SIX6O95475 246 aa2.1□□□□□ -2.07
LSM5-206ENST00000409987 COX14Q96I36 57 aa2.1□□□□□ -2.07
LSM5-206ENST00000409987 CR1P17927 2039 aa2.1□□□□□ -2.07
LSM5-206ENST00000409987 PKHD1P08F94 4074 aa2.09□□□□□ -2.07
LSM5-206ENST00000409987 IGKV2-40A0A087WW87 121 aaPredicted RBP2.09□□□□□ -2.07
LSM5-206ENST00000409987 RBAKDNA6NC62 111 aa2.09□□□□□ -2.07
LSM5-206ENST00000409987 DEFB108AA8MXU0 73 aa2.09□□□□□ -2.07
LSM5-206ENST00000409987 IGKV2D-40P01614 121 aaPredicted RBP2.09□□□□□ -2.07
LSM5-206ENST00000409987 UBE2D1P51668 147 aa2.09□□□□□ -2.07
LSM5-206ENST00000409987 SNRPFP62306 86 aaKnown RBP2.09□□□□□ -2.07
LSM5-206ENST00000409987 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 SRRM2Q9UQ35 2752 aaKnown RBP2.08□□□□□ -2.08
LSM5-206ENST00000409987 XAF1Q6GPH4 301 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 DPY30Q9C005 99 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 CYP4F30PQ9H0H9 118 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 AP4S1Q9Y587 144 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 PLCE1Q9P212 2302 aa2.08□□□□□ -2.08
LSM5-206ENST00000409987 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 NBDYA0A0U1RRE5 68 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 LCE6AA0A183 80 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
LSM5-206ENST00000409987 LINC00032P0C843 101 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 SNCAP37840 140 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 UBA52P62987 128 aaKnown RBP2.07□□□□□ -2.08
LSM5-206ENST00000409987 FXYD3Q14802 87 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 HSPG2P98160 4391 aa2.07□□□□□ -2.08
LSM5-206ENST00000409987 DNAH11Q96DT5 4516 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms