RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZNF22P17026 224 aaPredicted RBP8.74□□□□□ -1.01
NIF3L1-205ENST00000409588 NKAPP1Q8N9T2 125 aa8.74□□□□□ -1.01
NIF3L1-205ENST00000409588 LINC00167Q96N53 147 aa8.74□□□□□ -1.01
NIF3L1-205ENST00000409588 RPL24P83731 157 aaKnown RBP8.73□□□□□ -1.01
NIF3L1-205ENST00000409588 TRAV12-1A0A0B4J245 112 aa8.72□□□□□ -1.01
NIF3L1-205ENST00000409588 TMEM170BQ5T4T1 132 aa8.72□□□□□ -1.01
NIF3L1-205ENST00000409588 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
NIF3L1-205ENST00000409588 PFN2P35080 140 aa8.71□□□□□ -1.02
NIF3L1-205ENST00000409588 PMCHL1Q16048 86 aa8.71□□□□□ -1.02
NIF3L1-205ENST00000409588 YPEL4Q96NS1 127 aa8.71□□□□□ -1.02
NIF3L1-205ENST00000409588 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
NIF3L1-205ENST00000409588 CHTOPQ9Y3Y2 248 aaKnown RBP8.71□□□□□ -1.02
NIF3L1-205ENST00000409588 C11orf86A6NJI1 115 aa8.69□□□□□ -1.02
NIF3L1-205ENST00000409588 RPL37AP8A6NKH3 93 aa8.69□□□□□ -1.02
NIF3L1-205ENST00000409588 IFI27L1Q96BM0 104 aa8.69□□□□□ -1.02
NIF3L1-205ENST00000409588 SND1-IT1Q9HBX3 110 aa8.69□□□□□ -1.02
NIF3L1-205ENST00000409588 LINC00587B1AMM8 73 aa8.68□□□□□ -1.02
NIF3L1-205ENST00000409588 HSBP1O75506 76 aa8.67□□□□□ -1.02
NIF3L1-205ENST00000409588 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
NIF3L1-205ENST00000409588 LRP2P98164 4655 aa8.67□□□□□ -1.02
NIF3L1-205ENST00000409588 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
NIF3L1-205ENST00000409588 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
NIF3L1-205ENST00000409588 CRYGAP11844 174 aa8.66□□□□□ -1.02
NIF3L1-205ENST00000409588 UBE2AP49459 152 aa8.66□□□□□ -1.02
NIF3L1-205ENST00000409588 VPREB1P12018 145 aa8.65□□□□□ -1.02
NIF3L1-205ENST00000409588 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
NIF3L1-205ENST00000409588 LINC00158P58513 81 aa8.64□□□□□ -1.03
NIF3L1-205ENST00000409588 HERV-K104P63124 156 aa8.64□□□□□ -1.03
NIF3L1-205ENST00000409588 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
NIF3L1-205ENST00000409588 ATP6V1G1O75348 118 aa8.63□□□□□ -1.03
NIF3L1-205ENST00000409588 FAM229BQ4G0N7 80 aa8.63□□□□□ -1.03
NIF3L1-205ENST00000409588 IGKV2-28A0A075B6P5 120 aa8.62□□□□□ -1.03
NIF3L1-205ENST00000409588 IGKV2D-28P01615 120 aa8.62□□□□□ -1.03
NIF3L1-205ENST00000409588 CTAG1AP78358 180 aa8.62□□□□□ -1.03
NIF3L1-205ENST00000409588 TMEM126AQ9H061 195 aa8.62□□□□□ -1.03
NIF3L1-205ENST00000409588 TRGC2P03986 189 aa8.61□□□□□ -1.03
NIF3L1-205ENST00000409588 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
NIF3L1-205ENST00000409588 M0R378 163 aa8.6□□□□□ -1.03
NIF3L1-205ENST00000409588 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
NIF3L1-205ENST00000409588 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
NIF3L1-205ENST00000409588 FAM19A2Q8N3H0 131 aa8.6□□□□□ -1.03
NIF3L1-205ENST00000409588 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
NIF3L1-205ENST00000409588 MYMXA0A1B0GTQ4 84 aa8.59□□□□□ -1.03
NIF3L1-205ENST00000409588 PLNP26678 52 aa8.59□□□□□ -1.03
NIF3L1-205ENST00000409588 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
NIF3L1-205ENST00000409588 HSPB8Q9UJY1 196 aa8.59□□□□□ -1.03
NIF3L1-205ENST00000409588 A0A087X002 238 aa8.58□□□□□ -1.04
NIF3L1-205ENST00000409588 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
NIF3L1-205ENST00000409588 SCO1O75880 301 aa8.57□□□□□ -1.04
NIF3L1-205ENST00000409588 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
NIF3L1-205ENST00000409588 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
NIF3L1-205ENST00000409588 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
NIF3L1-205ENST00000409588 SMIM13P0DJ93 91 aa8.56□□□□□ -1.04
NIF3L1-205ENST00000409588 S100A12P80511 92 aa8.56□□□□□ -1.04
NIF3L1-205ENST00000409588 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
NIF3L1-205ENST00000409588 TMEM238C9JI98 176 aa8.55□□□□□ -1.04
NIF3L1-205ENST00000409588 SERF1AO75920 110 aa8.55□□□□□ -1.04
NIF3L1-205ENST00000409588 PRR4Q16378 134 aa8.55□□□□□ -1.04
NIF3L1-205ENST00000409588 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 A0A0U1RRA0 63 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 LEPROTO15243 131 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 NMUP48645 174 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 HERVK_113P61574 105 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 PRLHP81277 87 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 BOD1L2Q8IYS8 172 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 MIR7-3HGQ8N6C7 128 aa8.54□□□□□ -1.04
NIF3L1-205ENST00000409588 COLCA2A8K830 154 aa8.53□□□□□ -1.04
NIF3L1-205ENST00000409588 PRYO14603 147 aa8.53□□□□□ -1.04
NIF3L1-205ENST00000409588 DPM2O94777 84 aa8.53□□□□□ -1.04
NIF3L1-205ENST00000409588 Q8NDZ9 215 aa8.53□□□□□ -1.04
NIF3L1-205ENST00000409588 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
NIF3L1-205ENST00000409588 H0Y8G0 127 aa8.52□□□□□ -1.05
NIF3L1-205ENST00000409588 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
NIF3L1-205ENST00000409588 ZNF706Q9Y5V0 76 aaPredicted RBP8.52□□□□□ -1.05
NIF3L1-205ENST00000409588 TSPAN13O95857 204 aa8.51□□□□□ -1.05
NIF3L1-205ENST00000409588 LINC00310P59036 64 aa8.51□□□□□ -1.05
NIF3L1-205ENST00000409588 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
NIF3L1-205ENST00000409588 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
NIF3L1-205ENST00000409588 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
NIF3L1-205ENST00000409588 TRBV10-2A0A0K0K1G8 114 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 J3QQQ9 107 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 IGKCP01834 107 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 FABP4P15090 132 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 SPRR1AP35321 89 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
NIF3L1-205ENST00000409588 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
NIF3L1-205ENST00000409588 LGALS3P17931 250 aaKnown RBP8.48□□□□□ -1.05
NIF3L1-205ENST00000409588 ETDCA0A1B0GVM5 59 aa8.47□□□□□ -1.05
NIF3L1-205ENST00000409588 NDUFC2O95298 119 aa8.47□□□□□ -1.05
NIF3L1-205ENST00000409588 MIEN1Q9BRT3 115 aa8.47□□□□□ -1.05
NIF3L1-205ENST00000409588 LPAP08519 4548 aa8.46□□□□□ -1.05
NIF3L1-205ENST00000409588 H3BS24 57 aa8.46□□□□□ -1.06
NIF3L1-205ENST00000409588 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
NIF3L1-205ENST00000409588 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
NIF3L1-205ENST00000409588 NCR3O14931 201 aa8.45□□□□□ -1.06
NIF3L1-205ENST00000409588 SPANXB1Q9NS25 103 aaPredicted RBP8.45□□□□□ -1.06
NIF3L1-205ENST00000409588 CBY1Q9Y3M2 126 aa8.45□□□□□ -1.06
NIF3L1-205ENST00000409588 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms