RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 CDIP1Q9H305 208 aa9.82□□□□□ -0.84
SCRN1-203ENST00000409570 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
SCRN1-203ENST00000409570 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BKO60814 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BJP06899 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BOP23527 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BBP33778 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BDP58876 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BCP62807 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST2H2BEQ16778 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.8□□□□□ -0.84
SCRN1-203ENST00000409570 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BHQ93079 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BNQ99877 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 HIST1H2BMQ99879 126 aa9.8□□□□□ -0.84
SCRN1-203ENST00000409570 LINC00304Q8N9R0 145 aa9.78□□□□□ -0.84
SCRN1-203ENST00000409570 IGLV7-46A0A075B6I9 117 aa9.77□□□□□ -0.85
SCRN1-203ENST00000409570 PLNP26678 52 aa9.77□□□□□ -0.85
SCRN1-203ENST00000409570 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
SCRN1-203ENST00000409570 FABP4P15090 132 aa9.76□□□□□ -0.85
SCRN1-203ENST00000409570 LINC00167Q96N53 147 aa9.76□□□□□ -0.85
SCRN1-203ENST00000409570 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
SCRN1-203ENST00000409570 RPL37AP8A6NKH3 93 aa9.75□□□□□ -0.85
SCRN1-203ENST00000409570 COX17Q14061 63 aa9.75□□□□□ -0.85
SCRN1-203ENST00000409570 KRTAP13-1Q8IUC0 172 aa9.75□□□□□ -0.85
SCRN1-203ENST00000409570 H0Y8G0 127 aa9.74□□□□□ -0.85
SCRN1-203ENST00000409570 ATP6V1G1O75348 118 aa9.74□□□□□ -0.85
SCRN1-203ENST00000409570 FAM229BQ4G0N7 80 aa9.74□□□□□ -0.85
SCRN1-203ENST00000409570 COA6Q5JTJ3 125 aaKnown RBP9.74□□□□□ -0.85
SCRN1-203ENST00000409570 LCE2DQ5TA82 110 aaPredicted RBP9.73□□□□□ -0.85
SCRN1-203ENST00000409570 DPM2O94777 84 aa9.71□□□□□ -0.86
SCRN1-203ENST00000409570 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
SCRN1-203ENST00000409570 GAGE10A6NGK3 116 aa9.7□□□□□ -0.86
SCRN1-203ENST00000409570 IGKCP01834 107 aa9.7□□□□□ -0.86
SCRN1-203ENST00000409570 UBE2AP49459 152 aa9.7□□□□□ -0.86
SCRN1-203ENST00000409570 HERVK_113P61574 105 aa9.7□□□□□ -0.86
SCRN1-203ENST00000409570 ZNF625Q96I27 306 aaPredicted RBP9.7□□□□□ -0.86
SCRN1-203ENST00000409570 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
SCRN1-203ENST00000409570 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
SCRN1-203ENST00000409570 HERV-K104P63124 156 aa9.69□□□□□ -0.86
SCRN1-203ENST00000409570 CTAG1AP78358 180 aa9.69□□□□□ -0.86
SCRN1-203ENST00000409570 IGKV2D-26A0A0A0MRZ7 120 aa9.68□□□□□ -0.86
SCRN1-203ENST00000409570 PFN2P35080 140 aa9.68□□□□□ -0.86
SCRN1-203ENST00000409570 PLEKHB2Q96CS7 222 aa9.68□□□□□ -0.86
SCRN1-203ENST00000409570 IGLV5-37A0A075B6J1 123 aa9.67□□□□□ -0.86
SCRN1-203ENST00000409570 SYS1-DBNDD2H3BUS1 97 aa9.67□□□□□ -0.86
SCRN1-203ENST00000409570 CRCT1Q9UGL9 99 aa9.67□□□□□ -0.86
SCRN1-203ENST00000409570 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
SCRN1-203ENST00000409570 LEPROTO15243 131 aa9.66□□□□□ -0.86
SCRN1-203ENST00000409570 PET117Q6UWS5 81 aa9.66□□□□□ -0.86
SCRN1-203ENST00000409570 FSIP2Q5CZC0 6907 aa9.66□□□□□ -0.86
SCRN1-203ENST00000409570 NMUP48645 174 aa9.64□□□□□ -0.87
SCRN1-203ENST00000409570 NDUFA12Q9UI09 145 aa9.64□□□□□ -0.87
SCRN1-203ENST00000409570 AKR1D1P51857 326 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 LINC01547P58512 204 aaPredicted RBP9.63□□□□□ -0.87
SCRN1-203ENST00000409570 LINC00158P58513 81 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
SCRN1-203ENST00000409570 LINC01545Q5VT33 79 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 C3orf22Q8N5N4 141 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 NKAPP1Q8N9T2 125 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
SCRN1-203ENST00000409570 J3QQQ9 107 aa9.62□□□□□ -0.87
SCRN1-203ENST00000409570 PRLHP81277 87 aa9.62□□□□□ -0.87
SCRN1-203ENST00000409570 MEIG1Q5JSS6 88 aa9.62□□□□□ -0.87
SCRN1-203ENST00000409570 KRTAP4-1Q9BYQ7 146 aa9.62□□□□□ -0.87
SCRN1-203ENST00000409570 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
SCRN1-203ENST00000409570 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
SCRN1-203ENST00000409570 LGALS3P17931 250 aaKnown RBP9.61□□□□□ -0.87
SCRN1-203ENST00000409570 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
SCRN1-203ENST00000409570 C20orf202A1L168 122 aa9.6□□□□□ -0.87
SCRN1-203ENST00000409570 E9PLD3 99 aa9.6□□□□□ -0.87
SCRN1-203ENST00000409570 C3orf79P0CE67 100 aa9.6□□□□□ -0.87
SCRN1-203ENST00000409570 KRTDAPP60985 99 aa9.59□□□□□ -0.87
SCRN1-203ENST00000409570 KRTAP13-3Q3SY46 172 aa9.59□□□□□ -0.87
SCRN1-203ENST00000409570 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
SCRN1-203ENST00000409570 S100A6P06703 90 aa9.58□□□□□ -0.88
SCRN1-203ENST00000409570 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
SCRN1-203ENST00000409570 FAM19A1Q7Z5A9 133 aa9.58□□□□□ -0.88
SCRN1-203ENST00000409570 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
SCRN1-203ENST00000409570 VPREB1P12018 145 aa9.57□□□□□ -0.88
SCRN1-203ENST00000409570 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
SCRN1-203ENST00000409570 LINC00337Q8N6G1 96 aa9.57□□□□□ -0.88
SCRN1-203ENST00000409570 TMEM126AQ9H061 195 aa9.57□□□□□ -0.88
SCRN1-203ENST00000409570 TMEM238C9JI98 176 aa9.56□□□□□ -0.88
SCRN1-203ENST00000409570 S100A2P29034 98 aa9.56□□□□□ -0.88
SCRN1-203ENST00000409570 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
SCRN1-203ENST00000409570 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
SCRN1-203ENST00000409570 M0R378 163 aa9.54□□□□□ -0.88
SCRN1-203ENST00000409570 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
SCRN1-203ENST00000409570 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
SCRN1-203ENST00000409570 HIST3H2BBQ8N257 126 aa9.53□□□□□ -0.88
SCRN1-203ENST00000409570 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
SCRN1-203ENST00000409570 HIST1H2BLQ99880 126 aa9.51□□□□□ -0.89
SCRN1-203ENST00000409570 MIEN1Q9BRT3 115 aa9.51□□□□□ -0.89
SCRN1-203ENST00000409570 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
SCRN1-203ENST00000409570 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
SCRN1-203ENST00000409570 A0A0J9YXY3 114 aa9.49□□□□□ -0.89
SCRN1-203ENST00000409570 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
SCRN1-203ENST00000409570 SPRR4Q96PI1 79 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms