RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
HMGB1P17-201ENST00000403495 UACAQ9BZF9 1416 aa0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 HYDINQ4G0P3 5121 aa0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 UTP20O75691 2785 aaKnown RBP0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 REV3LO60673 3130 aa0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 PDCD11Q14690 1871 aaKnown RBP0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 HERC1Q15751 4861 aa0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
HMGB1P17-201ENST00000403495 UBR5O95071 2799 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 ACANP16112 2415 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 FAM186AA6NE01 2351 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 SHPRHQ149N8 1683 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 PDE4DIPQ5VU43 2346 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 ANK2Q01484 3957 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 K7EQZ3 153 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 COX6B1P14854 86 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 NMSQ5H8A3 153 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 USMG5Q96IX5 58 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 RABAC1Q9UI14 185 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 UBE2D4Q9Y2X8 147 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 SAMD9Q5K651 1589 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 SPTAN1Q13813 2472 aaKnown RBP0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 ITPR1Q14643 2758 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 DOCK11Q5JSL3 2073 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 CCDC18Q5T9S5 1454 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 CCDC141Q6ZP82 1450 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 RNF213Q63HN8 5207 aa0.47□□□□□ -2.33
HMGB1P17-201ENST00000403495 C5P01031 1676 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 TEX15Q9BXT5 2789 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 CEP250Q9BV73 2442 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 STAB2Q8WWQ8 2551 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 IGLC2P0DOY2 106 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 IGLC3P0DOY3 106 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 SNRPFP62306 86 aaKnown RBP0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 Q5VSD8 79 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 NEXMIFQ5QGS0 1516 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 TLN1Q9Y490 2541 aaKnown RBP0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 TLN2Q9Y4G6 2542 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 MED14O60244 1454 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 EP300Q09472 2414 aaPredicted RBP0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 BIRC6Q9NR09 4857 aa0.46□□□□□ -2.34
HMGB1P17-201ENST00000403495 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 CACNA1HO95180 2353 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 IQCF6A8MYZ5 107 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 PLGLAQ15195 96 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 KRTAP20-1Q3LI63 56 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 PCNX1Q96RV3 2341 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 CEP290O15078 2479 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 FSIP2Q5CZC0 6907 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 KIAA0556O60303 1618 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 EPPK1P58107 5090 aaKnown RBP0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 DMBT1Q9UGM3 2413 aaPredicted RBP0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 TENM2Q9NT68 2774 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 CNOT1A5YKK6 2376 aaKnown RBP0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 PAPPA2Q9BXP8 1791 aa0.45□□□□□ -2.34
HMGB1P17-201ENST00000403495 SLIT1O75093 1534 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 CELSR3Q9NYQ7 3312 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 MYMXA0A1B0GTQ4 84 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 COX8AP10176 69 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 SPRR1AP35321 89 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 DEFB109BQ30KR1 87 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 TDRG1Q3Y452 100 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 LINC00643Q86TS7 51 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 KIF14Q15058 1648 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 MTORP42345 2549 aa0.44□□□□□ -2.34
HMGB1P17-201ENST00000403495 PCNTO95613 3336 aa0.43□□□□□ -2.34
HMGB1P17-201ENST00000403495 A0A1B0GUT8 65 aa0.43□□□□□ -2.34
HMGB1P17-201ENST00000403495 ACYP1P07311 99 aa0.43□□□□□ -2.34
HMGB1P17-201ENST00000403495 DEFB112Q30KQ8 113 aa0.43□□□□□ -2.34
HMGB1P17-201ENST00000403495 MXRA5Q9NR99 2828 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 ZANQ9Y493 2812 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 MAP3K4Q9Y6R4 1608 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 SSPOA2VEC9 5147 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 HIVEP1P15822 2718 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 LAMA2P24043 3122 aaKnown RBP0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 KANTRA0A1W2PQU2 76 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 SPRR1BP22528 89 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 CRIPTQ9P021 101 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 U3KQA8 63 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 RGPD4Q7Z3J3 1758 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 ALKQ9UM73 1620 aa0.42□□□□□ -2.34
HMGB1P17-201ENST00000403495 ATP7BP35670 1465 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 MAGI2Q86UL8 1455 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 LRRC37AA6NMS7 1700 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 UBR1Q8IWV7 1749 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 CRYBG1Q9Y4K1 1723 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 SZT2Q5T011 3432 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 PPRC1Q5VV67 1664 aaKnown RBP0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 I3L3M4 83 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 S100A13Q99584 98 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 FXYD6Q9H0Q3 95 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 CACNA1EQ15878 2313 aa0.41□□□□□ -2.34
HMGB1P17-201ENST00000403495 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms