RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 EPM2AB3EWF7 344 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 ZNF843Q8N446 348 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 C16orf95Q9H693 158 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 PDE6GP18545 87 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 KLKP1Q107X0 134 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 SPATA3Q8NHX4 192 aa11.75□□□□□ -0.53
EWSR1-206ENST00000397938 TRAV10A0A0B4J240 114 aa11.74□□□□□ -0.53
EWSR1-206ENST00000397938 CXCL6P80162 114 aa11.74□□□□□ -0.53
EWSR1-206ENST00000397938 SPAG11BQ08648 103 aa11.74□□□□□ -0.53
EWSR1-206ENST00000397938 H3BQ85 93 aa11.74□□□□□ -0.53
EWSR1-206ENST00000397938 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
EWSR1-206ENST00000397938 SERP1Q9Y6X1 66 aa11.73□□□□□ -0.53
EWSR1-206ENST00000397938 SETD2Q9BYW2 2564 aaPredicted RBP11.73□□□□□ -0.53
EWSR1-206ENST00000397938 A0A0J9YWU9 116 aa11.73□□□□□ -0.53
EWSR1-206ENST00000397938 IGHV4-30-4P0DP06 118 aa11.73□□□□□ -0.53
EWSR1-206ENST00000397938 ITPR3Q14573 2671 aa11.71□□□□□ -0.54
EWSR1-206ENST00000397938 CYSRT1A8MQ03 144 aa11.7□□□□□ -0.54
EWSR1-206ENST00000397938 LYRM9A8MSI8 78 aa11.7□□□□□ -0.54
EWSR1-206ENST00000397938 PRB1P04280 392 aa11.7□□□□□ -0.54
EWSR1-206ENST00000397938 WFDC11Q8NEX6 87 aa11.69□□□□□ -0.54
EWSR1-206ENST00000397938 DIRC1Q969H9 104 aa11.68□□□□□ -0.54
EWSR1-206ENST00000397938 SNURFQ9Y675 71 aa11.68□□□□□ -0.54
EWSR1-206ENST00000397938 TRBV7-4A0A0J9YYF1 115 aa11.68□□□□□ -0.54
EWSR1-206ENST00000397938 RMI2Q96E14 147 aa11.68□□□□□ -0.54
EWSR1-206ENST00000397938 ZNF462Q96JM2 2506 aa11.67□□□□□ -0.54
EWSR1-206ENST00000397938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.66□□□□□ -0.54
EWSR1-206ENST00000397938 UBR5O95071 2799 aaPredicted RBP11.65□□□□□ -0.54
EWSR1-206ENST00000397938 GVQW2A0A096LPI5 108 aaPredicted RBP11.65□□□□□ -0.54
EWSR1-206ENST00000397938 ZFYVE26Q68DK2 2539 aa11.65□□□□□ -0.54
EWSR1-206ENST00000397938 GCN1Q92616 2671 aaKnown RBP11.65□□□□□ -0.54
EWSR1-206ENST00000397938 F8WEM9 126 aa11.64□□□□□ -0.55
EWSR1-206ENST00000397938 DEFB4AO15263 64 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 SCXQ7RTU7 201 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 APCP25054 2843 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 ZNF73O43830 326 aaPredicted RBP11.63□□□□□ -0.55
EWSR1-206ENST00000397938 COX7BP24311 80 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 TM2D3Q9BRN9 247 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 C6orf48Q9UBA6 75 aa11.63□□□□□ -0.55
EWSR1-206ENST00000397938 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
EWSR1-206ENST00000397938 XAGE1AQ9HD64 81 aa11.62□□□□□ -0.55
EWSR1-206ENST00000397938 PRR34Q9NV39 138 aa11.62□□□□□ -0.55
EWSR1-206ENST00000397938 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
EWSR1-206ENST00000397938 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
EWSR1-206ENST00000397938 FLNAP21333 2647 aaKnown RBP11.61□□□□□ -0.55
EWSR1-206ENST00000397938 CCDC168Q8NDH2 2452 aa11.61□□□□□ -0.55
EWSR1-206ENST00000397938 DAD1P61803 113 aa11.61□□□□□ -0.55
EWSR1-206ENST00000397938 LELP1Q5T871 98 aa11.61□□□□□ -0.55
EWSR1-206ENST00000397938 NDUFC1O43677 76 aa11.6□□□□□ -0.55
EWSR1-206ENST00000397938 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
EWSR1-206ENST00000397938 KRTAP1-1Q07627 177 aa11.59□□□□□ -0.55
EWSR1-206ENST00000397938 DEFB135Q30KP9 77 aa11.59□□□□□ -0.55
EWSR1-206ENST00000397938 SMIM26A0A096LP01 95 aa11.57□□□□□ -0.56
EWSR1-206ENST00000397938 NREPQ16612 68 aa11.57□□□□□ -0.56
EWSR1-206ENST00000397938 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
EWSR1-206ENST00000397938 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
EWSR1-206ENST00000397938 MIFP14174 115 aa11.56□□□□□ -0.56
EWSR1-206ENST00000397938 FP248Q71RG6 208 aaPredicted RBP11.56□□□□□ -0.56
EWSR1-206ENST00000397938 VPREB1P12018 145 aa11.55□□□□□ -0.56
EWSR1-206ENST00000397938 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
EWSR1-206ENST00000397938 KRTAP10-3P60369 221 aa11.55□□□□□ -0.56
EWSR1-206ENST00000397938 BPY2O14599 106 aa11.54□□□□□ -0.56
EWSR1-206ENST00000397938 ANK3Q12955 4377 aaKnown RBP11.54□□□□□ -0.56
EWSR1-206ENST00000397938 LINC00336Q6ZUF6 198 aa11.53□□□□□ -0.56
EWSR1-206ENST00000397938 ERC2-IT1O76042 136 aa11.53□□□□□ -0.56
EWSR1-206ENST00000397938 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
EWSR1-206ENST00000397938 LINC00528Q8N1L1 170 aa11.52□□□□□ -0.57
EWSR1-206ENST00000397938 HTN3P15516 51 aa11.52□□□□□ -0.57
EWSR1-206ENST00000397938 Q8NAQ8 132 aa11.52□□□□□ -0.57
EWSR1-206ENST00000397938 M0R378 163 aa11.51□□□□□ -0.57
EWSR1-206ENST00000397938 PRO0628Q9UI54 55 aa11.51□□□□□ -0.57
EWSR1-206ENST00000397938 MTORP42345 2549 aa11.5□□□□□ -0.57
EWSR1-206ENST00000397938 IGKV4-1P06312 121 aa11.5□□□□□ -0.57
EWSR1-206ENST00000397938 APOC4P55056 127 aa11.5□□□□□ -0.57
EWSR1-206ENST00000397938 Q8N9L7 120 aa11.5□□□□□ -0.57
EWSR1-206ENST00000397938 CAMK2N2Q96S95 79 aa11.49□□□□□ -0.57
EWSR1-206ENST00000397938 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
EWSR1-206ENST00000397938 SPART-AS1P0CW21 52 aa11.47□□□□□ -0.57
EWSR1-206ENST00000397938 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
EWSR1-206ENST00000397938 USP24Q9UPU5 2620 aa11.47□□□□□ -0.57
EWSR1-206ENST00000397938 LINC00474Q9P2X8 69 aa11.47□□□□□ -0.57
EWSR1-206ENST00000397938 OCR1Q9BZK8 76 aa11.46□□□□□ -0.57
EWSR1-206ENST00000397938 ACANP16112 2415 aa11.46□□□□□ -0.57
EWSR1-206ENST00000397938 Q6ZRU5 148 aa11.44□□□□□ -0.58
EWSR1-206ENST00000397938 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
EWSR1-206ENST00000397938 PRYO14603 147 aa11.43□□□□□ -0.58
EWSR1-206ENST00000397938 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
EWSR1-206ENST00000397938 C15orf56Q8N910 161 aa11.41□□□□□ -0.58
EWSR1-206ENST00000397938 C3orf84H3BNL1 204 aa11.4□□□□□ -0.58
EWSR1-206ENST00000397938 WFDC10BQ8IUB3 73 aa11.4□□□□□ -0.59
EWSR1-206ENST00000397938 VWFP04275 2813 aa11.39□□□□□ -0.59
EWSR1-206ENST00000397938 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
EWSR1-206ENST00000397938 FAM229BQ4G0N7 80 aa11.38□□□□□ -0.59
EWSR1-206ENST00000397938 Q6ZRP5 223 aa11.37□□□□□ -0.59
EWSR1-206ENST00000397938 PDZD2O15018 2839 aa11.37□□□□□ -0.59
EWSR1-206ENST00000397938 FUSP35637 526 aaKnown RBP eCLIP11.36□□□□□ -0.592e-6■■□□□ 12.8
EWSR1-206ENST00000397938 Q8N377 158 aa11.36□□□□□ -0.59
EWSR1-206ENST00000397938 IGLV5-48A0A075B6I7 105 aa11.35□□□□□ -0.59
EWSR1-206ENST00000397938 HIGD2AQ9BW72 106 aa11.35□□□□□ -0.59
EWSR1-206ENST00000397938 KCNQ1DNQ9H478 68 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms