RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
SEC13-204ENST00000397099 MYMXA0A1B0GTQ4 84 aa8.37□□□□□ -1.07
SEC13-204ENST00000397099 UBE2AP49459 152 aa8.37□□□□□ -1.07
SEC13-204ENST00000397099 H0Y8G0 127 aa8.36□□□□□ -1.07
SEC13-204ENST00000397099 HERVK_113P61574 105 aa8.36□□□□□ -1.07
SEC13-204ENST00000397099 PLEKHB2Q96CS7 222 aa8.36□□□□□ -1.07
SEC13-204ENST00000397099 NDUFA12Q9UI09 145 aa8.36□□□□□ -1.07
SEC13-204ENST00000397099 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
SEC13-204ENST00000397099 DPM2O94777 84 aa8.35□□□□□ -1.07
SEC13-204ENST00000397099 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
SEC13-204ENST00000397099 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
SEC13-204ENST00000397099 M0R378 163 aa8.34□□□□□ -1.07
SEC13-204ENST00000397099 LEPROTO15243 131 aa8.34□□□□□ -1.07
SEC13-204ENST00000397099 NMUP48645 174 aa8.34□□□□□ -1.07
SEC13-204ENST00000397099 LINC00310P59036 64 aa8.34□□□□□ -1.07
SEC13-204ENST00000397099 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.07
SEC13-204ENST00000397099 LRP2P98164 4655 aa8.33□□□□□ -1.08
SEC13-204ENST00000397099 IGKV2D-26A0A0A0MRZ7 120 aa8.33□□□□□ -1.08
SEC13-204ENST00000397099 IGKCP01834 107 aa8.33□□□□□ -1.08
SEC13-204ENST00000397099 FABP4P15090 132 aa8.33□□□□□ -1.08
SEC13-204ENST00000397099 TMEM126AQ9H061 195 aa8.33□□□□□ -1.08
SEC13-204ENST00000397099 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
SEC13-204ENST00000397099 CRYGAP11844 174 aa8.32□□□□□ -1.08
SEC13-204ENST00000397099 S100A12P80511 92 aa8.32□□□□□ -1.08
SEC13-204ENST00000397099 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
SEC13-204ENST00000397099 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
SEC13-204ENST00000397099 J3QQQ9 107 aa8.3□□□□□ -1.08
SEC13-204ENST00000397099 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
SEC13-204ENST00000397099 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
SEC13-204ENST00000397099 SCO1O75880 301 aa8.29□□□□□ -1.08
SEC13-204ENST00000397099 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
SEC13-204ENST00000397099 FAM19A1Q7Z5A9 133 aa8.29□□□□□ -1.08
SEC13-204ENST00000397099 LOC107984156A0A0G2JMH3 177 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 PRYO14603 147 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BKO60814 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BJP06899 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BOP23527 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BBP33778 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BDP58876 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BCP62807 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST2H2BEQ16778 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.28□□□□□ -1.08
SEC13-204ENST00000397099 ARL17AQ8IVW1 177 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BHQ93079 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BNQ99877 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 HIST1H2BMQ99879 126 aa8.28□□□□□ -1.08
SEC13-204ENST00000397099 TMEM238C9JI98 176 aa8.27□□□□□ -1.09
SEC13-204ENST00000397099 CTAG1AP78358 180 aa8.27□□□□□ -1.09
SEC13-204ENST00000397099 Q8NDZ9 215 aa8.27□□□□□ -1.09
SEC13-204ENST00000397099 TYMSOSQ8TAI1 123 aa8.27□□□□□ -1.09
SEC13-204ENST00000397099 MIEN1Q9BRT3 115 aa8.27□□□□□ -1.09
SEC13-204ENST00000397099 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
SEC13-204ENST00000397099 LINC00337Q8N6G1 96 aa8.26□□□□□ -1.09
SEC13-204ENST00000397099 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
SEC13-204ENST00000397099 E9PLD3 99 aa8.25□□□□□ -1.09
SEC13-204ENST00000397099 TSPEAR-AS2P59090 65 aa8.25□□□□□ -1.09
SEC13-204ENST00000397099 PRLHP81277 87 aa8.25□□□□□ -1.09
SEC13-204ENST00000397099 KCNQ1DNQ9H478 68 aa8.25□□□□□ -1.09
SEC13-204ENST00000397099 ZNF706Q9Y5V0 76 aaPredicted RBP8.25□□□□□ -1.09
SEC13-204ENST00000397099 A0A087X002 238 aa8.24□□□□□ -1.09
SEC13-204ENST00000397099 NDUFC2O95298 119 aa8.24□□□□□ -1.09
SEC13-204ENST00000397099 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
SEC13-204ENST00000397099 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
SEC13-204ENST00000397099 CBY1Q9Y3M2 126 aa8.24□□□□□ -1.09
SEC13-204ENST00000397099 AKR1D1P51857 326 aa8.23□□□□□ -1.09
SEC13-204ENST00000397099 SPANXB1Q9NS25 103 aaPredicted RBP8.23□□□□□ -1.09
SEC13-204ENST00000397099 NCR3O14931 201 aa8.22□□□□□ -1.09
SEC13-204ENST00000397099 SPRR1AP35321 89 aa8.22□□□□□ -1.09
SEC13-204ENST00000397099 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
SEC13-204ENST00000397099 LINC01545Q5VT33 79 aa8.22□□□□□ -1.09
SEC13-204ENST00000397099 HIGD2AQ9BW72 106 aa8.22□□□□□ -1.09
SEC13-204ENST00000397099 ETDCA0A1B0GVM5 59 aa8.21□□□□□ -1.1
SEC13-204ENST00000397099 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
SEC13-204ENST00000397099 TRBV10-3A0A0K0K1G6 114 aa8.19□□□□□ -1.1
SEC13-204ENST00000397099 TIMM17BO60830 172 aa8.19□□□□□ -1.1
SEC13-204ENST00000397099 DDTP30046 118 aa8.19□□□□□ -1.1
SEC13-204ENST00000397099 PRR4Q16378 134 aa8.19□□□□□ -1.1
SEC13-204ENST00000397099 C20orf202A1L168 122 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 KRTAP4-16G5E9R7 235 aaPredicted RBP8.18□□□□□ -1.1
SEC13-204ENST00000397099 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 S100A7L2Q5SY68 101 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 DAND5Q8N907 189 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
SEC13-204ENST00000397099 SPRR4Q96PI1 79 aa8.17□□□□□ -1.1
SEC13-204ENST00000397099 RNF213Q63HN8 5207 aa8.17□□□□□ -1.1
SEC13-204ENST00000397099 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
SEC13-204ENST00000397099 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
SEC13-204ENST00000397099 JOSD1Q15040 202 aaPredicted RBP8.16□□□□□ -1.1
SEC13-204ENST00000397099 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
SEC13-204ENST00000397099 LPAP08519 4548 aa8.16□□□□□ -1.1
SEC13-204ENST00000397099 TSPAN13O95857 204 aa8.15□□□□□ -1.1
SEC13-204ENST00000397099 COPS9Q8WXC6 57 aa8.15□□□□□ -1.1
SEC13-204ENST00000397099 HINT1P49773 126 aaPredicted RBP8.14□□□□□ -1.11
SEC13-204ENST00000397099 SMCR5Q8TEV8 140 aa8.14□□□□□ -1.11
SEC13-204ENST00000397099 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
SEC13-204ENST00000397099 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
SEC13-204ENST00000397099 B5MCH6 92 aa8.13□□□□□ -1.11
SEC13-204ENST00000397099 S100A1P23297 94 aa8.13□□□□□ -1.11
SEC13-204ENST00000397099 KRTDAPP60985 99 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms