RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
CXCL12-206ENST00000395795 RPL13AP40429 203 aaKnown RBP9.54□□□□□ -0.88
CXCL12-206ENST00000395795 H3BRM9 83 aa9.53□□□□□ -0.88
CXCL12-206ENST00000395795 VPREB1P12018 145 aa9.53□□□□□ -0.88
CXCL12-206ENST00000395795 FABP4P15090 132 aa9.53□□□□□ -0.88
CXCL12-206ENST00000395795 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.89
CXCL12-206ENST00000395795 SND1-IT1Q9HBX3 110 aa9.52□□□□□ -0.89
CXCL12-206ENST00000395795 PFN2P35080 140 aa9.51□□□□□ -0.89
CXCL12-206ENST00000395795 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
CXCL12-206ENST00000395795 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
CXCL12-206ENST00000395795 TRAV12-1A0A0B4J245 112 aa9.5□□□□□ -0.89
CXCL12-206ENST00000395795 KRTAP13-2Q52LG2 175 aa9.5□□□□□ -0.89
CXCL12-206ENST00000395795 MAP1LC3CQ9BXW4 147 aa9.5□□□□□ -0.89
CXCL12-206ENST00000395795 ERG28Q9UKR5 140 aa9.5□□□□□ -0.89
CXCL12-206ENST00000395795 S100A2P29034 98 aa9.48□□□□□ -0.89
CXCL12-206ENST00000395795 SNRPEP62304 92 aaKnown RBP9.48□□□□□ -0.89
CXCL12-206ENST00000395795 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
CXCL12-206ENST00000395795 IGKV2-28A0A075B6P5 120 aa9.47□□□□□ -0.89
CXCL12-206ENST00000395795 IGKV2D-28P01615 120 aa9.47□□□□□ -0.89
CXCL12-206ENST00000395795 HIST3H2BBQ8N257 126 aa9.47□□□□□ -0.89
CXCL12-206ENST00000395795 NKAPP1Q8N9T2 125 aa9.47□□□□□ -0.89
CXCL12-206ENST00000395795 C5orf52A6NGY3 159 aa9.46□□□□□ -0.9
CXCL12-206ENST00000395795 TMEM238C9JI98 176 aa9.46□□□□□ -0.9
CXCL12-206ENST00000395795 H0Y8G0 127 aa9.46□□□□□ -0.9
CXCL12-206ENST00000395795 COX17Q14061 63 aa9.46□□□□□ -0.9
CXCL12-206ENST00000395795 M0R378 163 aa9.45□□□□□ -0.9
CXCL12-206ENST00000395795 CRYGAP11844 174 aa9.45□□□□□ -0.9
CXCL12-206ENST00000395795 TMEM223A0PJW6 202 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 SYS1-DBNDD2H3BUS1 97 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 TSPAN13O95857 204 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 PRLHP81277 87 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 TMEM126AQ9H061 195 aa9.44□□□□□ -0.9
CXCL12-206ENST00000395795 PRR4Q16378 134 aa9.43□□□□□ -0.9
CXCL12-206ENST00000395795 PET117Q6UWS5 81 aa9.43□□□□□ -0.9
CXCL12-206ENST00000395795 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
CXCL12-206ENST00000395795 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
CXCL12-206ENST00000395795 UBE2AP49459 152 aa9.42□□□□□ -0.9
CXCL12-206ENST00000395795 KRTDAPP60985 99 aa9.42□□□□□ -0.9
CXCL12-206ENST00000395795 TYMSOSQ8TAI1 123 aa9.42□□□□□ -0.9
CXCL12-206ENST00000395795 FAM229BQ4G0N7 80 aa9.41□□□□□ -0.9
CXCL12-206ENST00000395795 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
CXCL12-206ENST00000395795 PLNP26678 52 aa9.4□□□□□ -0.9
CXCL12-206ENST00000395795 DPM2O94777 84 aa9.39□□□□□ -0.91
CXCL12-206ENST00000395795 IGKCP01834 107 aa9.39□□□□□ -0.91
CXCL12-206ENST00000395795 RPL24P83731 157 aaKnown RBP9.39□□□□□ -0.91
CXCL12-206ENST00000395795 LINC01545Q5VT33 79 aa9.39□□□□□ -0.91
CXCL12-206ENST00000395795 SFTA2Q6UW10 78 aa9.39□□□□□ -0.91
CXCL12-206ENST00000395795 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
CXCL12-206ENST00000395795 C20orf202A1L168 122 aa9.38□□□□□ -0.91
CXCL12-206ENST00000395795 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
CXCL12-206ENST00000395795 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
CXCL12-206ENST00000395795 MUC2Q02817 5179 aa9.37□□□□□ -0.91
CXCL12-206ENST00000395795 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
CXCL12-206ENST00000395795 AKR1D1P51857 326 aa9.37□□□□□ -0.91
CXCL12-206ENST00000395795 SMIM13P0DJ93 91 aa9.36□□□□□ -0.91
CXCL12-206ENST00000395795 LINC00158P58513 81 aa9.36□□□□□ -0.91
CXCL12-206ENST00000395795 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-206ENST00000395795 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
CXCL12-206ENST00000395795 C3orf22Q8N5N4 141 aa9.34□□□□□ -0.91
CXCL12-206ENST00000395795 SPRR1AP35321 89 aa9.33□□□□□ -0.92
CXCL12-206ENST00000395795 HERVK_113P61574 105 aa9.33□□□□□ -0.92
CXCL12-206ENST00000395795 LINC00304Q8N9R0 145 aa9.33□□□□□ -0.92
CXCL12-206ENST00000395795 RETNLBQ9BQ08 111 aa9.33□□□□□ -0.92
CXCL12-206ENST00000395795 MIR7-3HGQ8N6C7 128 aa9.32□□□□□ -0.92
CXCL12-206ENST00000395795 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
CXCL12-206ENST00000395795 SCGB1D1O95968 90 aa9.3□□□□□ -0.92
CXCL12-206ENST00000395795 BOD1L2Q8IYS8 172 aa9.3□□□□□ -0.92
CXCL12-206ENST00000395795 HIGD2AQ9BW72 106 aa9.3□□□□□ -0.92
CXCL12-206ENST00000395795 KCNQ1DNQ9H478 68 aa9.3□□□□□ -0.92
CXCL12-206ENST00000395795 NDUFA12Q9UI09 145 aa9.3□□□□□ -0.92
CXCL12-206ENST00000395795 IGKV2D-26A0A0A0MRZ7 120 aa9.29□□□□□ -0.92
CXCL12-206ENST00000395795 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
CXCL12-206ENST00000395795 LEPROTO15243 131 aa9.29□□□□□ -0.92
CXCL12-206ENST00000395795 HERV-K104P63124 156 aa9.29□□□□□ -0.92
CXCL12-206ENST00000395795 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
CXCL12-206ENST00000395795 NCR3O14931 201 aa9.28□□□□□ -0.92
CXCL12-206ENST00000395795 MUC17Q685J3 4493 aa9.28□□□□□ -0.92
CXCL12-206ENST00000395795 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 E9PLD3 99 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 PRYO14603 147 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 CTAG1AP78358 180 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 MEIG1Q5JSS6 88 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
CXCL12-206ENST00000395795 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
CXCL12-206ENST00000395795 SMCR5Q8TEV8 140 aa9.26□□□□□ -0.93
CXCL12-206ENST00000395795 J3QQQ9 107 aa9.25□□□□□ -0.93
CXCL12-206ENST00000395795 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
CXCL12-206ENST00000395795 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
CXCL12-206ENST00000395795 DAND5Q8N907 189 aa9.25□□□□□ -0.93
CXCL12-206ENST00000395795 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
CXCL12-206ENST00000395795 HSBP1L1C9JCN9 74 aa9.24□□□□□ -0.93
CXCL12-206ENST00000395795 EIF4EBP3O60516 100 aaPredicted RBP9.23□□□□□ -0.93
CXCL12-206ENST00000395795 NMUP48645 174 aa9.23□□□□□ -0.93
CXCL12-206ENST00000395795 TPRXLQ17RH7 258 aa9.23□□□□□ -0.93
CXCL12-206ENST00000395795 ERC2-IT1O76042 136 aa9.22□□□□□ -0.93
CXCL12-206ENST00000395795 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
CXCL12-206ENST00000395795 IGLV7-46A0A075B6I9 117 aa9.21□□□□□ -0.94
CXCL12-206ENST00000395795 LINC00587B1AMM8 73 aa9.21□□□□□ -0.94
CXCL12-206ENST00000395795 B5MCH6 92 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms