RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CDC42SE2Q9NRR3 84 aa5.38□□□□□ -1.55
VTI1A-201ENST00000393077 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 WFDC10AQ9H1F0 79 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 C22orf24Q9Y442 160 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 ETDCA0A1B0GVM5 59 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 SPATA3Q8NHX4 192 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 LINC00208Q96KT6 92 aa5.37□□□□□ -1.55
VTI1A-201ENST00000393077 SPENQ96T58 3664 aaKnown RBP5.36□□□□□ -1.55
VTI1A-201ENST00000393077 LOC110117498A0A087WWA1 95 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 KRTAP10-9P60411 292 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 K7EQG2 157 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 CFAP47Q6ZTR5 3102 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 LINC00575Q6W349 94 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 ESM1Q9NQ30 184 aa5.36□□□□□ -1.55
VTI1A-201ENST00000393077 SMIM29Q86T20 159 aa5.35□□□□□ -1.55
VTI1A-201ENST00000393077 RAI1Q7Z5J4 1906 aaPredicted RBP5.35□□□□□ -1.55
VTI1A-201ENST00000393077 Q6ZRP5 223 aa5.35□□□□□ -1.55
VTI1A-201ENST00000393077 COL12A1Q99715 3063 aa5.35□□□□□ -1.55
VTI1A-201ENST00000393077 LINC01006Q8NI28 216 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 CYP4F30PQ9H0H9 118 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 USP24Q9UPU5 2620 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 A6NDX4 124 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 A8MTW9 85 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 C10orf99Q6UWK7 81 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 PRM2P04554 102 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 CD164L2Q6UWJ8 174 aa5.34□□□□□ -1.55
VTI1A-201ENST00000393077 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
VTI1A-201ENST00000393077 HELZ2Q9BYK8 2649 aaKnown RBP5.34□□□□□ -1.56
VTI1A-201ENST00000393077 FLNCQ14315 2725 aa5.34□□□□□ -1.56
VTI1A-201ENST00000393077 K7EMT4 169 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 SLURP1P55000 103 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 IGLV10-54A0A075B6I4 117 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 Q6ZSN1 163 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 IGSF10Q6WRI0 2623 aa5.33□□□□□ -1.56
VTI1A-201ENST00000393077 DNAJC9-AS1A6NH13 148 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 C8orf87E5RJ46 101 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 IGHV4-31P0DP07 118 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 WFDC13Q8IUB5 93 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 H3BUA1 57 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 PSCAO43653 123 aa5.32□□□□□ -1.56
VTI1A-201ENST00000393077 NOP10Q9NPE3 64 aaKnown RBP5.32□□□□□ -1.56
VTI1A-201ENST00000393077 ANGP03950 147 aaKnown RBP5.31□□□□□ -1.56
VTI1A-201ENST00000393077 Q6ZTC4 211 aa5.31□□□□□ -1.56
VTI1A-201ENST00000393077 WFDC10BQ8IUB3 73 aa5.31□□□□□ -1.56
VTI1A-201ENST00000393077 C9orf116Q5BN46 136 aaPredicted RBP5.31□□□□□ -1.56
VTI1A-201ENST00000393077 FLNAP21333 2647 aaKnown RBP5.3□□□□□ -1.56
VTI1A-201ENST00000393077 KALRNO60229 2985 aa5.3□□□□□ -1.56
VTI1A-201ENST00000393077 DEFB130BP0DP73 79 aa5.3□□□□□ -1.56
VTI1A-201ENST00000393077 DEFB130AP0DP74 79 aa5.3□□□□□ -1.56
VTI1A-201ENST00000393077 ITPR3Q14573 2671 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 M0R2N4 97 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 HTN3P15516 51 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 C16orf90A8MZG2 172 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 KLK12Q9UKR0 248 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 A0A096LPF7 62 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 CCL24O00175 119 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 Q8IZM0 81 aa5.29□□□□□ -1.56
VTI1A-201ENST00000393077 CHD6Q8TD26 2715 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 COL27A1Q8IZC6 1860 aaPredicted RBP5.28□□□□□ -1.56
VTI1A-201ENST00000393077 F8P00451 2351 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 A0A0J9YWU9 116 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 OCR1Q9BZK8 76 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 ASPMQ8IZT6 3477 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 COX17Q14061 63 aa5.28□□□□□ -1.56
VTI1A-201ENST00000393077 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
VTI1A-201ENST00000393077 XAGE1AQ9HD64 81 aa5.27□□□□□ -1.57
VTI1A-201ENST00000393077 Q6YL49 198 aa5.27□□□□□ -1.57
VTI1A-201ENST00000393077 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 LY6G6DO95868 133 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 DCHS1Q96JQ0 3298 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 IGKV4-1P06312 121 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 C10orf25Q5T742 122 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 SPAG11AQ6PDA7 123 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 LAMA5O15230 3695 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 LRBAP50851 2863 aa5.26□□□□□ -1.57
VTI1A-201ENST00000393077 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 PLA2G2AP14555 144 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 ATRQ13535 2644 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 LINC00167Q96N53 147 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 IGLV4-60A0A075B6I1 120 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 C9orf66Q5T8R8 295 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 Q5VV11 94 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 RETNLBQ9BQ08 111 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 C18orf65Q6ZTR6 163 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 SMR3AQ99954 134 aa5.25□□□□□ -1.57
VTI1A-201ENST00000393077 TACC2O95359 2948 aa5.24□□□□□ -1.57
VTI1A-201ENST00000393077 H0Y9P7 68 aa5.24□□□□□ -1.57
VTI1A-201ENST00000393077 PHF5AQ7RTV0 110 aaKnown RBP5.24□□□□□ -1.57
VTI1A-201ENST00000393077 GYPEP15421 78 aa5.24□□□□□ -1.57
VTI1A-201ENST00000393077 CHCHD10Q8WYQ3 142 aaPredicted RBP5.23□□□□□ -1.57
VTI1A-201ENST00000393077 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
VTI1A-201ENST00000393077 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.23□□□□□ -1.57
VTI1A-201ENST00000393077 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
VTI1A-201ENST00000393077 FSHBP01225 129 aa5.23□□□□□ -1.57
VTI1A-201ENST00000393077 ELOF1P60002 83 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms