RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 PBRM1Q86U86 1689 aa-3.87□□□□□ -3.03
RNU6-239P-201ENST00000390990 MT1GP13640 62 aa-3.88□□□□□ -3.03
RNU6-239P-201ENST00000390990 MT1LQ93083 61 aa-3.88□□□□□ -3.03
RNU6-239P-201ENST00000390990 SPANXCQ9NY87 97 aa-3.88□□□□□ -3.03
RNU6-239P-201ENST00000390990 HSPB11Q9Y547 144 aa-3.88□□□□□ -3.03
RNU6-239P-201ENST00000390990 J3QR89 54 aa-3.89□□□□□ -3.03
RNU6-239P-201ENST00000390990 SAA2P0DJI9 122 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-239P-201ENST00000390990 SMIM3Q9BZL3 60 aa-3.89□□□□□ -3.03
RNU6-239P-201ENST00000390990 DMXL2Q8TDJ6 3036 aa-3.89□□□□□ -3.03
RNU6-239P-201ENST00000390990 PRLHP81277 87 aa-3.9□□□□□ -3.03
RNU6-239P-201ENST00000390990 LINC00474Q9P2X8 69 aa-3.9□□□□□ -3.03
RNU6-239P-201ENST00000390990 CPSF1Q10570 1443 aaKnown RBP-3.9□□□□□ -3.03
RNU6-239P-201ENST00000390990 TSTD3H0UI37 97 aa-3.91□□□□□ -3.04
RNU6-239P-201ENST00000390990 K7ERU9 68 aa-3.91□□□□□ -3.04
RNU6-239P-201ENST00000390990 SPANXDQ9BXN6 97 aa-3.91□□□□□ -3.04
RNU6-239P-201ENST00000390990 DPH3Q96FX2 82 aa-3.92□□□□□ -3.04
RNU6-239P-201ENST00000390990 DDA1Q9BW61 102 aa-3.92□□□□□ -3.04
RNU6-239P-201ENST00000390990 CENPHQ9H3R5 247 aa-3.92□□□□□ -3.04
RNU6-239P-201ENST00000390990 SPENQ96T58 3664 aaKnown RBP-3.93□□□□□ -3.04
RNU6-239P-201ENST00000390990 MAPKBP1O60336 1514 aa-3.93□□□□□ -3.04
RNU6-239P-201ENST00000390990 CUX1P39880 1505 aa-3.94□□□□□ -3.04
RNU6-239P-201ENST00000390990 A0A0G2JND7 137 aa-3.94□□□□□ -3.04
RNU6-239P-201ENST00000390990 TRBV7-7A0A0K0K1E9 115 aa-3.94□□□□□ -3.04
RNU6-239P-201ENST00000390990 NDUFA3O95167 84 aa-3.94□□□□□ -3.04
RNU6-239P-201ENST00000390990 SFTA2Q6UW10 78 aa-3.94□□□□□ -3.04
RNU6-239P-201ENST00000390990 NMSQ5H8A3 153 aa-3.95□□□□□ -3.04
RNU6-239P-201ENST00000390990 ARL11Q969Q4 196 aa-3.95□□□□□ -3.04
RNU6-239P-201ENST00000390990 CFTRP13569 1480 aa-3.95□□□□□ -3.04
RNU6-239P-201ENST00000390990 CEP152O94986 1710 aa-3.95□□□□□ -3.04
RNU6-239P-201ENST00000390990 SCN11AQ9UI33 1791 aa-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 M0R2Z0 102 aa-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 MT1MQ8N339 61 aa-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 PDCD10Q9BUL8 212 aa-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 SNRNP25Q9BV90 132 aaKnown RBP-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 TARBP1Q13395 1621 aaKnown RBP-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 FHAD1B1AJZ9 1412 aa-3.96□□□□□ -3.04
RNU6-239P-201ENST00000390990 NEFHP12036 1026 aa-3.97□□□□□ -3.04
RNU6-239P-201ENST00000390990 COMMD6Q7Z4G1 85 aa-3.97□□□□□ -3.04
RNU6-239P-201ENST00000390990 DIP2CQ9Y2E4 1556 aa-3.97□□□□□ -3.05
RNU6-239P-201ENST00000390990 MRC2Q9UBG0 1479 aa-3.98□□□□□ -3.05
RNU6-239P-201ENST00000390990 TLN1Q9Y490 2541 aaKnown RBP-3.98□□□□□ -3.05
RNU6-239P-201ENST00000390990 SMCO1Q147U7 214 aa-3.98□□□□□ -3.05
RNU6-239P-201ENST00000390990 SERP1Q9Y6X1 66 aa-3.98□□□□□ -3.05
RNU6-239P-201ENST00000390990 ADGRG4Q8IZF6 3080 aa-3.98□□□□□ -3.05
RNU6-239P-201ENST00000390990 ARMS2P0C7Q2 107 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 SCGB1A1P11684 91 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 CLPSL2Q6UWE3 100 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 DEFB107AQ8IZN7 70 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 PP6455Q8WZ26 134 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 PPP3R2Q96LZ3 170 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 PSENENQ9NZ42 101 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 GSKIPQ9P0R6 139 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 ITPR2Q14571 2701 aa-3.99□□□□□ -3.05
RNU6-239P-201ENST00000390990 PREX1Q8TCU6 1659 aa-4□□□□□ -3.05
RNU6-239P-201ENST00000390990 H0Y9P7 68 aa-4□□□□□ -3.05
RNU6-239P-201ENST00000390990 UBE2D4Q9Y2X8 147 aa-4□□□□□ -3.05
RNU6-239P-201ENST00000390990 A2ML1A8K2U0 1454 aa-4□□□□□ -3.05
RNU6-239P-201ENST00000390990 MT2AP02795 61 aa-4.01□□□□□ -3.05
RNU6-239P-201ENST00000390990 TRAPPC2P0DI81 140 aa-4.01□□□□□ -3.05
RNU6-239P-201ENST00000390990 TRAPPC2BP0DI82 140 aa-4.01□□□□□ -3.05
RNU6-239P-201ENST00000390990 COX6B2Q6YFQ2 88 aa-4.01□□□□□ -3.05
RNU6-239P-201ENST00000390990 H3BQF6 201 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 FABP1P07148 127 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 COPZ1P61923 177 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 GNGT1P63211 74 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 HSD52Q0P140 79 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 COPS9Q8WXC6 57 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 TCEAL4Q96EI5 215 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 RERGLQ9H628 205 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 SPANXA1Q9NS26 97 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 CCDC167Q9P0B6 97 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 PHLPP1O60346 1717 aa-4.02□□□□□ -3.05
RNU6-239P-201ENST00000390990 MT1BP07438 61 aa-4.03□□□□□ -3.05
RNU6-239P-201ENST00000390990 NBEAP1P0C6P0 100 aa-4.03□□□□□ -3.05
RNU6-239P-201ENST00000390990 Q56UQ5 140 aa-4.03□□□□□ -3.05
RNU6-239P-201ENST00000390990 CDC26Q8NHZ8 85 aa-4.03□□□□□ -3.05
RNU6-239P-201ENST00000390990 MANBALQ9NQG1 85 aa-4.03□□□□□ -3.05
RNU6-239P-201ENST00000390990 TOP2BQ02880 1626 aa-4.03□□□□□ -3.06
RNU6-239P-201ENST00000390990 COX6CP09669 75 aa-4.04□□□□□ -3.06
RNU6-239P-201ENST00000390990 KRTAP20-1Q3LI63 56 aa-4.04□□□□□ -3.06
RNU6-239P-201ENST00000390990 ROBO1Q9Y6N7 1651 aa-4.04□□□□□ -3.06
RNU6-239P-201ENST00000390990 MGAQ8IWI9 3026 aa-4.05□□□□□ -3.06
RNU6-239P-201ENST00000390990 ATMQ13315 3056 aa-4.05□□□□□ -3.06
RNU6-239P-201ENST00000390990 RPS25P62851 125 aaKnown RBP-4.05□□□□□ -3.06
RNU6-239P-201ENST00000390990 Q0VG73 95 aa-4.05□□□□□ -3.06
RNU6-239P-201ENST00000390990 SHPRHQ149N8 1683 aa-4.06□□□□□ -3.06
RNU6-239P-201ENST00000390990 KIF20BQ96Q89 1820 aa-4.07□□□□□ -3.06
RNU6-239P-201ENST00000390990 MIF4GDA9UHW6 222 aaKnown RBP-4.07□□□□□ -3.06
RNU6-239P-201ENST00000390990 TSTD1Q8NFU3 115 aa-4.07□□□□□ -3.06
RNU6-239P-201ENST00000390990 C12orf57Q99622 126 aa-4.07□□□□□ -3.06
RNU6-239P-201ENST00000390990 C7orf77A4D0Y5 90 aa-4.08□□□□□ -3.06
RNU6-239P-201ENST00000390990 CKS1BP61024 79 aa-4.08□□□□□ -3.06
RNU6-239P-201ENST00000390990 GRIN2AQ12879 1464 aa-4.08□□□□□ -3.06
RNU6-239P-201ENST00000390990 CDC42BPAQ5VT25 1732 aa-4.08□□□□□ -3.06
RNU6-239P-201ENST00000390990 C8orf59Q8N0T1 100 aaPredicted RBP-4.08□□□□□ -3.06
RNU6-239P-201ENST00000390990 PLXNC1O60486 1568 aa-4.09□□□□□ -3.06
RNU6-239P-201ENST00000390990 SMIM15Q7Z3B0 74 aa-4.09□□□□□ -3.06
RNU6-239P-201ENST00000390990 KRTAP8-1Q8IUC2 63 aa-4.09□□□□□ -3.06
RNU6-239P-201ENST00000390990 PRO1854Q9UHT4 67 aa-4.09□□□□□ -3.06
RNU6-239P-201ENST00000390990 ABCC5O15440 1437 aa-4.1□□□□□ -3.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms