RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 MT1AP04731 61 aa-3.15□□□□□ -2.91
SNORA40.4-201ENST00000390971 C1orf54Q8WWF1 131 aa-3.15□□□□□ -2.91
SNORA40.4-201ENST00000390971 TRANK1O15050 2925 aa-3.15□□□□□ -2.91
SNORA40.4-201ENST00000390971 KALRNO60229 2985 aa-3.15□□□□□ -2.91
SNORA40.4-201ENST00000390971 RIF1Q5UIP0 2472 aaKnown RBP-3.16□□□□□ -2.91
SNORA40.4-201ENST00000390971 A0A087WVE0 104 aa-3.16□□□□□ -2.92
SNORA40.4-201ENST00000390971 MRPL34Q9BQ48 92 aaKnown RBP-3.17□□□□□ -2.92
SNORA40.4-201ENST00000390971 CCL22O00626 93 aa-3.18□□□□□ -2.92
SNORA40.4-201ENST00000390971 COL4A6Q14031 1691 aa-3.18□□□□□ -2.92
SNORA40.4-201ENST00000390971 LRRC37AA6NMS7 1700 aa-3.19□□□□□ -2.92
SNORA40.4-201ENST00000390971 LYSTQ99698 3801 aa-3.19□□□□□ -2.92
SNORA40.4-201ENST00000390971 DEFA5Q01523 94 aa-3.19□□□□□ -2.92
SNORA40.4-201ENST00000390971 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-3.19□□□□□ -2.92
SNORA40.4-201ENST00000390971 DMXL1Q9Y485 3027 aa-3.2□□□□□ -2.92
SNORA40.4-201ENST00000390971 MYOM2P54296 1465 aa-3.21□□□□□ -2.92
SNORA40.4-201ENST00000390971 PDCD11Q14690 1871 aaKnown RBP-3.21□□□□□ -2.92
SNORA40.4-201ENST00000390971 HEPN1Q6WQI6 88 aa-3.21□□□□□ -2.92
SNORA40.4-201ENST00000390971 KIAA1551Q9HCM1 1747 aa-3.22□□□□□ -2.92
SNORA40.4-201ENST00000390971 CRYM-AS1A6NIL9 109 aa-3.22□□□□□ -2.92
SNORA40.4-201ENST00000390971 H3BQF6 201 aa-3.22□□□□□ -2.92
SNORA40.4-201ENST00000390971 SNAPC5O75971 98 aa-3.22□□□□□ -2.92
SNORA40.4-201ENST00000390971 ABCA13Q86UQ4 5058 aa-3.22□□□□□ -2.93
SNORA40.4-201ENST00000390971 A0A0C4DFX4 3053 aa-3.22□□□□□ -2.93
SNORA40.4-201ENST00000390971 TRAV30A0A087WSZ9 112 aa-3.23□□□□□ -2.93
SNORA40.4-201ENST00000390971 LRRK2Q5S007 2527 aa-3.24□□□□□ -2.93
SNORA40.4-201ENST00000390971 MGAM2Q2M2H8 2515 aa-3.24□□□□□ -2.93
SNORA40.4-201ENST00000390971 CMYA5Q8N3K9 4069 aa-3.25□□□□□ -2.93
SNORA40.4-201ENST00000390971 NCOA3Q9Y6Q9 1424 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 ZZEF1O43149 2961 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 A0A0G2JND7 137 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 SVBPQ8N300 66 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 VAMP8Q9BV40 100 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 FAM107BQ9H098 131 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 CDKN2A-AS1Q9UH64 79 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 DNAH11Q96DT5 4516 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 ITPR1Q14643 2758 aa-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 ROCK2O75116 1388 aaKnown RBP-3.26□□□□□ -2.93
SNORA40.4-201ENST00000390971 ACACAQ13085 2346 aa-3.27□□□□□ -2.93
SNORA40.4-201ENST00000390971 H0Y9P7 68 aa-3.27□□□□□ -2.93
SNORA40.4-201ENST00000390971 C7orf77A4D0Y5 90 aa-3.28□□□□□ -2.93
SNORA40.4-201ENST00000390971 IER3IP1Q9Y5U9 82 aa-3.28□□□□□ -2.93
SNORA40.4-201ENST00000390971 DYNC1H1Q14204 4646 aaKnown RBP-3.28□□□□□ -2.94
SNORA40.4-201ENST00000390971 ARHGAP5Q13017 1502 aa-3.29□□□□□ -2.94
SNORA40.4-201ENST00000390971 MTORP42345 2549 aa-3.29□□□□□ -2.94
SNORA40.4-201ENST00000390971 LELP1Q5T871 98 aa-3.29□□□□□ -2.94
SNORA40.4-201ENST00000390971 CGREF1Q99674 301 aa-3.29□□□□□ -2.94
SNORA40.4-201ENST00000390971 TROQ12816 1431 aaPredicted RBP-3.29□□□□□ -2.94
SNORA40.4-201ENST00000390971 S100A12P80511 92 aa-3.3□□□□□ -2.94
SNORA40.4-201ENST00000390971 WFDC13Q8IUB5 93 aa-3.3□□□□□ -2.94
SNORA40.4-201ENST00000390971 TARBP1Q13395 1621 aaKnown RBP-3.3□□□□□ -2.94
SNORA40.4-201ENST00000390971 APOBP04114 4563 aaKnown RBP-3.31□□□□□ -2.94
SNORA40.4-201ENST00000390971 RELNP78509 3460 aa-3.31□□□□□ -2.94
SNORA40.4-201ENST00000390971 GNGT1P63211 74 aa-3.31□□□□□ -2.94
SNORA40.4-201ENST00000390971 HSD52Q0P140 79 aa-3.31□□□□□ -2.94
SNORA40.4-201ENST00000390971 DEFB107AQ8IZN7 70 aa-3.31□□□□□ -2.94
SNORA40.4-201ENST00000390971 MAPKBP1O60336 1514 aa-3.32□□□□□ -2.94
SNORA40.4-201ENST00000390971 CLIP1P30622 1438 aa-3.32□□□□□ -2.94
SNORA40.4-201ENST00000390971 KRTDAPP60985 99 aa-3.32□□□□□ -2.94
SNORA40.4-201ENST00000390971 NBEAQ8NFP9 2946 aa-3.32□□□□□ -2.94
SNORA40.4-201ENST00000390971 CCDC168Q8NDH2 2452 aa-3.33□□□□□ -2.94
SNORA40.4-201ENST00000390971 TMEM262E9PQX1 116 aa-3.33□□□□□ -2.94
SNORA40.4-201ENST00000390971 H3BQ15 152 aa-3.33□□□□□ -2.94
SNORA40.4-201ENST00000390971 HIGD1BQ9P298 99 aa-3.33□□□□□ -2.94
SNORA40.4-201ENST00000390971 NALCNQ8IZF0 1738 aa-3.33□□□□□ -2.94
SNORA40.4-201ENST00000390971 SACSQ9NZJ4 4579 aa-3.34□□□□□ -2.94
SNORA40.4-201ENST00000390971 SPTY2D1-AS1A0A0U1RR47 76 aa-3.34□□□□□ -2.94
SNORA40.4-201ENST00000390971 CICQ96RK0 1608 aaPredicted RBP-3.34□□□□□ -2.94
SNORA40.4-201ENST00000390971 PKD1L2Q7Z442 2459 aa-3.34□□□□□ -2.94
SNORA40.4-201ENST00000390971 KNDC1Q76NI1 1749 aa-3.35□□□□□ -2.95
SNORA40.4-201ENST00000390971 ARMS2P0C7Q2 107 aa-3.35□□□□□ -2.95
SNORA40.4-201ENST00000390971 MT1HP80294 61 aa-3.35□□□□□ -2.95
SNORA40.4-201ENST00000390971 UTP20O75691 2785 aaKnown RBP-3.35□□□□□ -2.95
SNORA40.4-201ENST00000390971 GCN1Q92616 2671 aaKnown RBP-3.36□□□□□ -2.95
SNORA40.4-201ENST00000390971 ANKRD36A6QL64 1941 aa-3.36□□□□□ -2.95
SNORA40.4-201ENST00000390971 NRKQ7Z2Y5 1582 aa-3.36□□□□□ -2.95
SNORA40.4-201ENST00000390971 DNAH1Q9P2D7 4330 aa-3.36□□□□□ -2.95
SNORA40.4-201ENST00000390971 COL14A1Q05707 1796 aaKnown RBP-3.38□□□□□ -2.95
SNORA40.4-201ENST00000390971 PDE4DIPQ5VU43 2346 aa-3.38□□□□□ -2.95
SNORA40.4-201ENST00000390971 GNG4P50150 75 aa-3.38□□□□□ -2.95
SNORA40.4-201ENST00000390971 CUX1P39880 1505 aa-3.39□□□□□ -2.95
SNORA40.4-201ENST00000390971 SHPRHQ149N8 1683 aa-3.39□□□□□ -2.95
SNORA40.4-201ENST00000390971 CEP295Q9C0D2 2601 aa-3.41□□□□□ -2.96
SNORA40.4-201ENST00000390971 TRBV7-7A0A0K0K1E9 115 aa-3.41□□□□□ -2.96
SNORA40.4-201ENST00000390971 HMGN1P05114 100 aa-3.41□□□□□ -2.96
SNORA40.4-201ENST00000390971 PPP3R1P63098 170 aa-3.41□□□□□ -2.96
SNORA40.4-201ENST00000390971 CHD1O14646 1710 aa-3.41□□□□□ -2.96
SNORA40.4-201ENST00000390971 H3BNG1 76 aa-3.42□□□□□ -2.96
SNORA40.4-201ENST00000390971 CHD7Q9P2D1 2997 aa-3.42□□□□□ -2.96
SNORA40.4-201ENST00000390971 DNAH7Q8WXX0 4024 aa-3.42□□□□□ -2.96
SNORA40.4-201ENST00000390971 TRIOO75962 3097 aa-3.42□□□□□ -2.96
SNORA40.4-201ENST00000390971 CC2D2AQ9P2K1 1620 aa-3.43□□□□□ -2.96
SNORA40.4-201ENST00000390971 SPHKAPQ2M3C7 1700 aa-3.43□□□□□ -2.96
SNORA40.4-201ENST00000390971 PSMG4Q5JS54 123 aa-3.43□□□□□ -2.96
SNORA40.4-201ENST00000390971 TOPAZ1Q8N9V7 1692 aa-3.44□□□□□ -2.96
SNORA40.4-201ENST00000390971 COL6A5A8TX70 2615 aa-3.45□□□□□ -2.96
SNORA40.4-201ENST00000390971 ASIPP42127 132 aa-3.46□□□□□ -2.96
SNORA40.4-201ENST00000390971 BCORQ6W2J9 1755 aa-3.46□□□□□ -2.96
SNORA40.4-201ENST00000390971 hADV29S1A0JD25 119 aa-3.47□□□□□ -2.96
SNORA40.4-201ENST00000390971 RPL13AP3Q6NVV1 102 aa-3.47□□□□□ -2.96
SNORA40.4-201ENST00000390971 FRYQ5TBA9 3013 aa-3.47□□□□□ -2.97
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms