RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 KANTRA0A1W2PQU2 76 aa0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 CEBPZOSA8MTT3 80 aa0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 HMGA1P17096 107 aaKnown RBP0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 HMGN3Q15651 99 aa0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 FAM103A1Q9BTL3 118 aaKnown RBP0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 CACNA1HO95180 2353 aa0.62□□□□□ -2.31
SNORA40.19-201ENST00000390846 PLCE1Q9P212 2302 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 CCDC180Q9P1Z9 1646 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 ACYP1P07311 99 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 SMIM11AP58511 58 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 DEFB112Q30KQ8 113 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 HILPDAQ9Y5L2 63 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 DIP2AQ14689 1571 aa0.61□□□□□ -2.31
SNORA40.19-201ENST00000390846 DUOX2Q9NRD8 1548 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 PREX1Q8TCU6 1659 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 TRAV21A0A0B4J279 112 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 TRBV6-1A0A0K0K1D8 114 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 A0A1B0GU69 56 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 ANGP03950 147 aaKnown RBP0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 IFI6P09912 130 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 TJP1Q07157 1748 aa0.6□□□□□ -2.31
SNORA40.19-201ENST00000390846 POLQO75417 2590 aa0.59□□□□□ -2.31
SNORA40.19-201ENST00000390846 SMIM31A0A1B0GVY4 71 aa0.59□□□□□ -2.31
SNORA40.19-201ENST00000390846 SMIM13P0DJ93 91 aa0.59□□□□□ -2.31
SNORA40.19-201ENST00000390846 GNGT1P63211 74 aa0.59□□□□□ -2.31
SNORA40.19-201ENST00000390846 UBE2DNLQ8IWF7 75 aa0.59□□□□□ -2.31
SNORA40.19-201ENST00000390846 ABCA6Q8N139 1617 aa0.59□□□□□ -2.32
SNORA40.19-201ENST00000390846 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.32
SNORA40.19-201ENST00000390846 EFCAB5A4FU69 1503 aa0.59□□□□□ -2.32
SNORA40.19-201ENST00000390846 URB2Q14146 1524 aaKnown RBP0.59□□□□□ -2.32
SNORA40.19-201ENST00000390846 LMTK2Q8IWU2 1503 aa0.59□□□□□ -2.32
SNORA40.19-201ENST00000390846 LRRC37AA6NMS7 1700 aa0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 NKTRP30414 1462 aaKnown RBP0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 USF3Q68DE3 2245 aa0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 MROH2AA6NES4 1674 aa0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 NHSQ6T4R5 1651 aa0.58□□□□□ -2.32
SNORA40.19-201ENST00000390846 GOLGA4Q13439 2230 aaKnown RBP0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 ITSN2Q9NZM3 1697 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 A0A1B0GUT8 65 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 UMAD1C9J7I0 102 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 SPINK9Q5DT21 86 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 C2CD3Q4AC94 2353 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 ZNF292O60281 2723 aa0.57□□□□□ -2.32
SNORA40.19-201ENST00000390846 RALGAPBQ86X10 1494 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 LCE6AA0A183 80 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 PIN1P1O15428 100 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 LELP1Q5T871 98 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 KRTAP5-10Q6L8G5 202 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 CNFNQ9BYD5 112 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 CHD9Q3L8U1 2897 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 BIVM-ERCC5R4GMW8 1640 aa0.56□□□□□ -2.32
SNORA40.19-201ENST00000390846 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 NWD1Q149M9 1564 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 FXYD6-FXYD2A0A087WZ82 144 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 IFI27P40305 119 aaPredicted RBP0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 PREX2Q70Z35 1606 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 TNRC6CQ9HCJ0 1690 aaKnown RBP0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 DDX60LQ5H9U9 1706 aaKnown RBP0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 REV3LO60673 3130 aa0.55□□□□□ -2.32
SNORA40.19-201ENST00000390846 TIAM1Q13009 1591 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 RNF17Q9BXT8 1623 aaKnown RBP0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 K7EQZ3 153 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 NREPQ16612 68 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 DEFB123Q8N688 67 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 GAFA1Q96PS6 74 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 TP53AIP1Q9HCN2 124 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 C4AP0C0L4 1744 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 C4BP0C0L5 1744 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 PTPRZ1P23471 2315 aaPredicted RBP0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 HFM1A2PYH4 1435 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 CELSR2Q9HCU4 2923 aa0.54□□□□□ -2.32
SNORA40.19-201ENST00000390846 AHNAK2Q8IVF2 5795 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 ALS2Q96Q42 1657 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 CNOT1A5YKK6 2376 aaKnown RBP0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 F8P00451 2351 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 A0A087WXM4 84 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 A0A0D9SFI3 127 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 H3BVH4 76 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 COX8AP10176 69 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 COX7BP24311 80 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 ATP5EP2Q5VTU8 51 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 WFDC9Q8NEX5 89 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 PRO0255Q9UI72 69 aa0.53□□□□□ -2.32
SNORA40.19-201ENST00000390846 TNCP24821 2201 aa0.53□□□□□ -2.33
SNORA40.19-201ENST00000390846 FRAS1Q86XX4 4008 aa0.53□□□□□ -2.33
SNORA40.19-201ENST00000390846 GVINP1Q7Z2Y8 2422 aa0.53□□□□□ -2.33
SNORA40.19-201ENST00000390846 KRTAP2-3P0C7H8 128 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 C3orf79P0CE67 100 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 COX6A2Q02221 97 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 KRTAP21-3Q3LHN1 58 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 KRTAP2-4Q9BYR9 128 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 KRTAP2-1Q9BYU5 128 aa0.52□□□□□ -2.33
SNORA40.19-201ENST00000390846 BDP1A6H8Y1 2624 aa0.51□□□□□ -2.33
SNORA40.19-201ENST00000390846 FBN2P35556 2912 aa0.51□□□□□ -2.33
SNORA40.19-201ENST00000390846 LY75O60449 1722 aa0.51□□□□□ -2.33
SNORA40.19-201ENST00000390846 PLXNC1O60486 1568 aa0.51□□□□□ -2.33
SNORA40.19-201ENST00000390846 PIEZO1Q92508 2521 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms