RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 SPTY2D1-AS1A0A0U1RR47 76 aa0.16□□□□□ -2.38
SNAPC3-201ENST00000380799 IQCF6A8MYZ5 107 aa0.16□□□□□ -2.38
SNAPC3-201ENST00000380799 PRM1P04553 51 aa0.16□□□□□ -2.38
SNAPC3-201ENST00000380799 PLGLAQ15195 96 aa0.16□□□□□ -2.38
SNAPC3-201ENST00000380799 GOLGA4Q13439 2230 aaKnown RBP0.15□□□□□ -2.38
SNAPC3-201ENST00000380799 KIF20BQ96Q89 1820 aa0.15□□□□□ -2.39
SNAPC3-201ENST00000380799 NCOR2Q9Y618 2525 aa0.15□□□□□ -2.39
SNAPC3-201ENST00000380799 UNC79Q9P2D8 2635 aa0.15□□□□□ -2.39
SNAPC3-201ENST00000380799 PIEZO2Q9H5I5 2752 aa0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 A0A1B0GUT8 65 aa0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 SNRPFP62306 86 aaKnown RBP0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 MRPL34Q9BQ48 92 aaKnown RBP0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 ATP7BP35670 1465 aa0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 RB1CC1Q8TDY2 1594 aa0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 COL14A1Q05707 1796 aaKnown RBP0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 CELSR1Q9NYQ6 3014 aa0.13□□□□□ -2.39
SNAPC3-201ENST00000380799 TENM4Q6N022 2769 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 PKDREJQ9NTG1 2253 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 PTPRQQ9UMZ3 2332 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 MYMXA0A1B0GTQ4 84 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 KIF14Q15058 1648 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 LRRC7Q96NW7 1537 aa0.12□□□□□ -2.39
SNAPC3-201ENST00000380799 MAGI2Q86UL8 1455 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 H1FX-AS1Q4G0G2 97 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 RABAC1Q9UI14 185 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 VWFP04275 2813 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 PPLO60437 1756 aa0.11□□□□□ -2.39
SNAPC3-201ENST00000380799 TMEM131LA2VDJ0 1609 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 MAP3K4Q9Y6R4 1608 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 RGPD2P0DJD1 1756 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 LINC00643Q86TS7 51 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 RGPD1P0DJD0 1748 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 QSER1Q2KHR3 1735 aa0.1□□□□□ -2.39
SNAPC3-201ENST00000380799 AKAP6Q13023 2319 aa0.09□□□□□ -2.39
SNAPC3-201ENST00000380799 COX7BP24311 80 aa0.09□□□□□ -2.4
SNAPC3-201ENST00000380799 TDRG1Q3Y452 100 aa0.09□□□□□ -2.4
SNAPC3-201ENST00000380799 DOPEY2Q9Y3R5 2298 aa0.09□□□□□ -2.4
SNAPC3-201ENST00000380799 UACAQ9BZF9 1416 aa0.09□□□□□ -2.4
SNAPC3-201ENST00000380799 MACF1Q9UPN3 7388 aaKnown RBP0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 HIVEP3Q5T1R4 2406 aa0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 URB1O60287 2271 aaKnown RBP0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 WNK2Q9Y3S1 2297 aa0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 CCL22O00626 93 aa0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 SPRR2DP22532 72 aa0.08□□□□□ -2.4
SNAPC3-201ENST00000380799 CLIP1P30622 1438 aa0.07□□□□□ -2.4
SNAPC3-201ENST00000380799 GAFA1Q96PS6 74 aa0.07□□□□□ -2.4
SNAPC3-201ENST00000380799 MYCBP2O75592 4640 aa0.07□□□□□ -2.4
SNAPC3-201ENST00000380799 CEBPZOSA8MTT3 80 aa0.06□□□□□ -2.4
SNAPC3-201ENST00000380799 ACYP1P07311 99 aa0.06□□□□□ -2.4
SNAPC3-201ENST00000380799 ANKRD17O75179 2603 aaKnown RBP0.06□□□□□ -2.4
SNAPC3-201ENST00000380799 BCORQ6W2J9 1755 aa0.06□□□□□ -2.4
SNAPC3-201ENST00000380799 DMBT1Q9UGM3 2413 aaPredicted RBP0.05□□□□□ -2.4
SNAPC3-201ENST00000380799 MED14O60244 1454 aa0.05□□□□□ -2.4
SNAPC3-201ENST00000380799 HEPN1Q6WQI6 88 aa0.05□□□□□ -2.4
SNAPC3-201ENST00000380799 UBR3Q6ZT12 1888 aa0.05□□□□□ -2.4
SNAPC3-201ENST00000380799 HUWE1Q7Z6Z7 4374 aaKnown RBP0.05□□□□□ -2.4
SNAPC3-201ENST00000380799 SUPT6HQ7KZ85 1726 aaKnown RBP0.04□□□□□ -2.4
SNAPC3-201ENST00000380799 IGSF10Q6WRI0 2623 aa0.04□□□□□ -2.4
SNAPC3-201ENST00000380799 LELP1Q5T871 98 aa0.04□□□□□ -2.4
SNAPC3-201ENST00000380799 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
SNAPC3-201ENST00000380799 LRRC9Q6ZRR7 1453 aa0.03□□□□□ -2.4
SNAPC3-201ENST00000380799 TNXBP22105 4242 aa0.03□□□□□ -2.4
SNAPC3-201ENST00000380799 PREX1Q8TCU6 1659 aa0.03□□□□□ -2.4
SNAPC3-201ENST00000380799 TRAV21A0A0B4J279 112 aa0.03□□□□□ -2.4
SNAPC3-201ENST00000380799 KANTRA0A1W2PQU2 76 aa0.03□□□□□ -2.4
SNAPC3-201ENST00000380799 RPL38P63173 70 aaKnown RBP0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 WFDC9Q8NEX5 89 aa0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 SPTBN1Q01082 2364 aaKnown RBP0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 CDKN2A-AS1Q9UH64 79 aa0.01□□□□□ -2.41
SNAPC3-201ENST00000380799 NCOR1O75376 2440 aa0.01□□□□□ -2.41
SNAPC3-201ENST00000380799 CACNA1AO00555 2505 aa0.01□□□□□ -2.41
SNAPC3-201ENST00000380799 LPAP08519 4548 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 SSPOA2VEC9 5147 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 M0R2T5 61 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 POLR1AO95602 1720 aaPredicted RBP0□□□□□ -2.41
SNAPC3-201ENST00000380799 CCDC18Q5T9S5 1454 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 USP32Q8NFA0 1604 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 CHD6Q8TD26 2715 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 FAT2Q9NYQ8 4349 aa0□□□□□ -2.41
SNAPC3-201ENST00000380799 PKD1L1Q8TDX9 2849 aa-0□□□□□ -2.41
SNAPC3-201ENST00000380799 UBR5O95071 2799 aaPredicted RBP-0□□□□□ -2.41
SNAPC3-201ENST00000380799 ZNF831Q5JPB2 1677 aa-0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 ABCA2Q9BZC7 2435 aa-0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 ST20Q9HBF5 79 aa-0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 LTN1O94822 1766 aa-0.02□□□□□ -2.41
SNAPC3-201ENST00000380799 URB2Q14146 1524 aaKnown RBP-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 NDUFB1O75438 58 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 ADIRFQ15847 76 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 WFDC13Q8IUB5 93 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 S100A13Q99584 98 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 DIP2BQ9P265 1576 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 NCOA2Q15596 1464 aa-0.03□□□□□ -2.41
SNAPC3-201ENST00000380799 HSPG2P98160 4391 aa-0.03□□□□□ -2.42
SNAPC3-201ENST00000380799 RGPD8O14715 1765 aaPredicted RBP-0.04□□□□□ -2.42
SNAPC3-201ENST00000380799 RGPD5Q99666 1765 aa-0.04□□□□□ -2.42
SNAPC3-201ENST00000380799 GVINP1Q7Z2Y8 2422 aa-0.04□□□□□ -2.42
SNAPC3-201ENST00000380799 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms