RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 LINC01547P58512 204 aaPredicted RBP10.78□□□□□ -0.68
FXN-201ENST00000377270 NREPQ16612 68 aa10.78□□□□□ -0.68
FXN-201ENST00000377270 PRYO14603 147 aa10.78□□□□□ -0.68
FXN-201ENST00000377270 Q8N3U1 123 aa10.78□□□□□ -0.68
FXN-201ENST00000377270 UNC79Q9P2D8 2635 aa10.78□□□□□ -0.68
FXN-201ENST00000377270 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.68
FXN-201ENST00000377270 TRGV1A0A0A0MS02 117 aa10.77□□□□□ -0.68
FXN-201ENST00000377270 hDV103S1A0JD37 113 aa10.77□□□□□ -0.68
FXN-201ENST00000377270 HAMPP81172 84 aa10.77□□□□□ -0.68
FXN-201ENST00000377270 RPL36AP83881 106 aaKnown RBP10.77□□□□□ -0.68
FXN-201ENST00000377270 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.68
FXN-201ENST00000377270 Q6ZVQ6 151 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 FAM19A3Q7Z5A8 133 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 TRAV22A0A0B4J277 110 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
FXN-201ENST00000377270 ZNF73O43830 326 aaPredicted RBP10.75□□□□□ -0.69
FXN-201ENST00000377270 UBE2BP63146 152 aa10.75□□□□□ -0.69
FXN-201ENST00000377270 SYCNQ0VAF6 134 aa10.74□□□□□ -0.69
FXN-201ENST00000377270 WFDC10AQ9H1F0 79 aa10.74□□□□□ -0.69
FXN-201ENST00000377270 SND1-IT1Q9HBX3 110 aa10.74□□□□□ -0.69
FXN-201ENST00000377270 FASNP49327 2511 aaKnown RBP10.73□□□□□ -0.69
FXN-201ENST00000377270 CMC4P56277 68 aaPredicted RBP10.72□□□□□ -0.69
FXN-201ENST00000377270 SMR3AQ99954 134 aa10.72□□□□□ -0.69
FXN-201ENST00000377270 KMT2BQ9UMN6 2715 aaPredicted RBP10.72□□□□□ -0.69
FXN-201ENST00000377270 NDUFS5O43920 106 aa10.71□□□□□ -0.69
FXN-201ENST00000377270 IGLV1-51P01701 117 aa10.71□□□□□ -0.69
FXN-201ENST00000377270 GIG44P09565 113 aaPredicted RBP10.71□□□□□ -0.69
FXN-201ENST00000377270 NOP10Q9NPE3 64 aaKnown RBP10.71□□□□□ -0.69
FXN-201ENST00000377270 ERC2-IT1O76042 136 aa10.71□□□□□ -0.7
FXN-201ENST00000377270 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
FXN-201ENST00000377270 A8MUN3 132 aa10.7□□□□□ -0.7
FXN-201ENST00000377270 SPTSSBQ8NFR3 76 aa10.69□□□□□ -0.7
FXN-201ENST00000377270 C19orf73Q9NVV2 129 aa10.69□□□□□ -0.7
FXN-201ENST00000377270 K7EQD1 137 aa10.68□□□□□ -0.7
FXN-201ENST00000377270 TRBV10-1A0A0K0K1A3 114 aa10.68□□□□□ -0.7
FXN-201ENST00000377270 LYRM9A8MSI8 78 aa10.68□□□□□ -0.7
FXN-201ENST00000377270 C2CD3Q4AC94 2353 aa10.67□□□□□ -0.7
FXN-201ENST00000377270 BPY2O14599 106 aa10.67□□□□□ -0.7
FXN-201ENST00000377270 C1orf64Q8NEQ6 169 aa10.67□□□□□ -0.7
FXN-201ENST00000377270 LINC00269Q8N2A0 174 aa10.66□□□□□ -0.7
FXN-201ENST00000377270 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
FXN-201ENST00000377270 HECTD1Q9ULT8 2610 aa10.66□□□□□ -0.7
FXN-201ENST00000377270 TRGV2A0A075B6R0 118 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 C16orf90A8MZG2 172 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 UBE2L6O14933 153 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 CCL18P55774 89 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 LINC00158P58513 81 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 NOTCH2Q04721 2471 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 PRR26Q8N8Z3 221 aa10.65□□□□□ -0.7
FXN-201ENST00000377270 M0R2N4 97 aa10.65□□□□□ -0.71
FXN-201ENST00000377270 CXCL6P80162 114 aa10.65□□□□□ -0.71
FXN-201ENST00000377270 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.71
FXN-201ENST00000377270 HIGD2AQ9BW72 106 aa10.65□□□□□ -0.71
FXN-201ENST00000377270 CDC42SE2Q9NRR3 84 aa10.65□□□□□ -0.71
FXN-201ENST00000377270 GCN1Q92616 2671 aaKnown RBP10.64□□□□□ -0.71
FXN-201ENST00000377270 CSNK1G2-AS1Q8NCQ2 148 aa10.64□□□□□ -0.71
FXN-201ENST00000377270 COX7B2Q8TF08 81 aa10.64□□□□□ -0.71
FXN-201ENST00000377270 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
FXN-201ENST00000377270 SCXQ7RTU7 201 aa10.64□□□□□ -0.71
FXN-201ENST00000377270 Q6ZQT0 140 aa10.62□□□□□ -0.71
FXN-201ENST00000377270 LY6G6DO95868 133 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 Q5VV11 94 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 A6NN06 94 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 LINC00167Q96N53 147 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
FXN-201ENST00000377270 TRGV4A0A0C4DH28 118 aa10.6□□□□□ -0.71
FXN-201ENST00000377270 UBE2AP49459 152 aa10.6□□□□□ -0.71
FXN-201ENST00000377270 FN1P02751 2386 aaKnown RBP10.6□□□□□ -0.71
FXN-201ENST00000377270 TRBV6-4A0A1B0GX49 114 aa10.58□□□□□ -0.72
FXN-201ENST00000377270 ATP11AUNQ6ZP68 121 aa10.57□□□□□ -0.72
FXN-201ENST00000377270 C7orf65Q6ZTY9 151 aa10.57□□□□□ -0.72
FXN-201ENST00000377270 LCA10Q71F78 164 aa10.57□□□□□ -0.72
FXN-201ENST00000377270 CHKB-CPT1BH3BT56 60 aa10.56□□□□□ -0.72
FXN-201ENST00000377270 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
FXN-201ENST00000377270 Q8N814 137 aa10.56□□□□□ -0.72
FXN-201ENST00000377270 OCR1Q9BZK8 76 aa10.56□□□□□ -0.72
FXN-201ENST00000377270 HCG22E2RYF7 251 aa10.56□□□□□ -0.72
FXN-201ENST00000377270 PSCAO43653 123 aa10.55□□□□□ -0.72
FXN-201ENST00000377270 DIRC1Q969H9 104 aa10.55□□□□□ -0.72
FXN-201ENST00000377270 DEFB130BP0DP73 79 aa10.54□□□□□ -0.72
FXN-201ENST00000377270 DEFB130AP0DP74 79 aa10.54□□□□□ -0.72
FXN-201ENST00000377270 SPATA3Q8NHX4 192 aa10.54□□□□□ -0.72
FXN-201ENST00000377270 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
FXN-201ENST00000377270 VWFP04275 2813 aa10.54□□□□□ -0.72
FXN-201ENST00000377270 LOC110117498A0A087WWA1 95 aa10.53□□□□□ -0.72
FXN-201ENST00000377270 INAFM1C9JVW0 142 aa10.53□□□□□ -0.72
FXN-201ENST00000377270 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
FXN-201ENST00000377270 NBEAL2Q6ZNJ1 2754 aa10.52□□□□□ -0.73
FXN-201ENST00000377270 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
FXN-201ENST00000377270 IGKV3OR2-268A0A0C4DH90 116 aa10.5□□□□□ -0.73
FXN-201ENST00000377270 PRB2P02812 416 aaPredicted RBP10.5□□□□□ -0.73
FXN-201ENST00000377270 MDFIQ99750 246 aa10.5□□□□□ -0.73
FXN-201ENST00000377270 NSD1Q96L73 2696 aaPredicted RBP10.49□□□□□ -0.73
FXN-201ENST00000377270 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
FXN-201ENST00000377270 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
FXN-201ENST00000377270 Q8N9L7 120 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms