RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CRPP02741 224 aa8.43□□□□□ -1.06
VRK3-202ENST00000377011 CHCHD5Q9BSY4 110 aa8.42□□□□□ -1.06
VRK3-202ENST00000377011 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
VRK3-202ENST00000377011 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
VRK3-202ENST00000377011 INAFM2P0DMQ5 153 aa8.41□□□□□ -1.06
VRK3-202ENST00000377011 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
VRK3-202ENST00000377011 A0A0U1RRA0 63 aa8.4□□□□□ -1.06
VRK3-202ENST00000377011 BAALC-AS2P0C853 105 aa8.4□□□□□ -1.06
VRK3-202ENST00000377011 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
VRK3-202ENST00000377011 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
VRK3-202ENST00000377011 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.07
VRK3-202ENST00000377011 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.07
VRK3-202ENST00000377011 SND1-IT1Q9HBX3 110 aa8.4□□□□□ -1.07
VRK3-202ENST00000377011 A0A096LPF7 62 aa8.39□□□□□ -1.07
VRK3-202ENST00000377011 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
VRK3-202ENST00000377011 H0YGX0 51 aa8.39□□□□□ -1.07
VRK3-202ENST00000377011 ESRGQ1W209 222 aa8.39□□□□□ -1.07
VRK3-202ENST00000377011 UBE2DNLQ8IWF7 75 aa8.39□□□□□ -1.07
VRK3-202ENST00000377011 B5MCH6 92 aa8.38□□□□□ -1.07
VRK3-202ENST00000377011 RTL8CO15255 209 aa8.38□□□□□ -1.07
VRK3-202ENST00000377011 Q6ZR54 194 aa8.38□□□□□ -1.07
VRK3-202ENST00000377011 HERC2O95714 4834 aa8.38□□□□□ -1.07
VRK3-202ENST00000377011 LINC00158P58513 81 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 SS18Q15532 418 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 SVIPQ8NHG7 77 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 TOMM7Q9P0U1 55 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 IGKV2-28A0A075B6P5 120 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 IGKV2D-28P01615 120 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 CXCL5P42830 114 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 Q8IZM0 81 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 LINC00337Q8N6G1 96 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 PRO0255Q9UI72 69 aa8.37□□□□□ -1.07
VRK3-202ENST00000377011 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
VRK3-202ENST00000377011 GYPEP15421 78 aa8.36□□□□□ -1.07
VRK3-202ENST00000377011 MALP21145 153 aa8.36□□□□□ -1.07
VRK3-202ENST00000377011 CCL18P55774 89 aa8.36□□□□□ -1.07
VRK3-202ENST00000377011 CCDC179H3BU77 68 aa8.35□□□□□ -1.07
VRK3-202ENST00000377011 PAX4O43316 350 aa8.34□□□□□ -1.07
VRK3-202ENST00000377011 FAM218AQ96MZ4 157 aa8.34□□□□□ -1.07
VRK3-202ENST00000377011 IGKV3OR2-268A0A0C4DH90 116 aa8.34□□□□□ -1.07
VRK3-202ENST00000377011 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
VRK3-202ENST00000377011 DNAL4O96015 105 aa8.33□□□□□ -1.08
VRK3-202ENST00000377011 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
VRK3-202ENST00000377011 C5orf38Q86SI9 138 aa8.33□□□□□ -1.08
VRK3-202ENST00000377011 SMIM11BQ8TCY0 68 aa8.33□□□□□ -1.08
VRK3-202ENST00000377011 C22orf24Q9Y442 160 aa8.33□□□□□ -1.08
VRK3-202ENST00000377011 H3BNG1 76 aa8.32□□□□□ -1.08
VRK3-202ENST00000377011 COX17Q14061 63 aa8.32□□□□□ -1.08
VRK3-202ENST00000377011 TMEM126AQ9H061 195 aa8.32□□□□□ -1.08
VRK3-202ENST00000377011 A0A1B0GX51 115 aa8.32□□□□□ -1.08
VRK3-202ENST00000377011 RYR1P21817 5038 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 NDUFC2O95298 119 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 LYPD5Q6UWN5 251 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
VRK3-202ENST00000377011 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
VRK3-202ENST00000377011 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
VRK3-202ENST00000377011 PFN2P35080 140 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 XCL1P47992 114 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 SMCR5Q8TEV8 140 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 FAM236AA0A1B0GUQ0 79 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 FAM236BA0A1B0GV22 79 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
VRK3-202ENST00000377011 WFDC10BQ8IUB3 73 aa8.28□□□□□ -1.08
VRK3-202ENST00000377011 A0A087WYN8 130 aa8.27□□□□□ -1.09
VRK3-202ENST00000377011 TNP2Q05952 138 aa8.27□□□□□ -1.09
VRK3-202ENST00000377011 GAGE2AQ6NT46 116 aa8.27□□□□□ -1.09
VRK3-202ENST00000377011 LINC00167Q96N53 147 aa8.27□□□□□ -1.09
VRK3-202ENST00000377011 Q9HAA7 133 aa8.27□□□□□ -1.09
VRK3-202ENST00000377011 KIAA0087Q14695 138 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 C1orf134Q5TEV5 83 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 UQCRQO14949 82 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 C3orf22Q8N5N4 141 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 OR13C6PQ8NH95 151 aa8.26□□□□□ -1.09
VRK3-202ENST00000377011 Q8N3U1 123 aa8.25□□□□□ -1.09
VRK3-202ENST00000377011 HSPG2P98160 4391 aa8.25□□□□□ -1.09
VRK3-202ENST00000377011 LECT2O14960 151 aa8.24□□□□□ -1.09
VRK3-202ENST00000377011 REG3AQ06141 175 aa8.24□□□□□ -1.09
VRK3-202ENST00000377011 Q6JHZ5 121 aa8.24□□□□□ -1.09
VRK3-202ENST00000377011 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
VRK3-202ENST00000377011 CHCHD10Q8WYQ3 142 aaPredicted RBP8.24□□□□□ -1.09
VRK3-202ENST00000377011 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
VRK3-202ENST00000377011 ATOX1O00244 68 aa8.23□□□□□ -1.09
VRK3-202ENST00000377011 HIST1H4AP62805 103 aaKnown RBP8.23□□□□□ -1.09
VRK3-202ENST00000377011 LINC00269Q8N2A0 174 aa8.23□□□□□ -1.09
VRK3-202ENST00000377011 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
VRK3-202ENST00000377011 LELP1Q5T871 98 aa8.23□□□□□ -1.09
VRK3-202ENST00000377011 LINC00336Q6ZUF6 198 aa8.23□□□□□ -1.09
VRK3-202ENST00000377011 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
VRK3-202ENST00000377011 FUSP35637 526 aaKnown RBP eCLIP8.22□□□□□ -1.09
VRK3-202ENST00000377011 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
VRK3-202ENST00000377011 ANGP03950 147 aaKnown RBP8.21□□□□□ -1.09
VRK3-202ENST00000377011 S100A7L2Q5SY68 101 aa8.21□□□□□ -1.09
VRK3-202ENST00000377011 CLPSL2Q6UWE3 100 aa8.21□□□□□ -1.09
VRK3-202ENST00000377011 ABCA13Q86UQ4 5058 aa8.21□□□□□ -1.1
VRK3-202ENST00000377011 COX7CP15954 63 aa8.2□□□□□ -1.1
VRK3-202ENST00000377011 C9orf153Q5TBE3 101 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms