RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 LINC01561Q8N1V8 128 aa11.71□□□□□ -0.54
MCF2L-203ENST00000375604 EPM2AB3EWF7 344 aa11.69□□□□□ -0.54
MCF2L-203ENST00000375604 Q8NAQ8 132 aa11.69□□□□□ -0.54
MCF2L-203ENST00000375604 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
MCF2L-203ENST00000375604 KRTAP10-11P60412 298 aa11.68□□□□□ -0.54
MCF2L-203ENST00000375604 TMEM254Q8TBM7 123 aa11.67□□□□□ -0.54
MCF2L-203ENST00000375604 PMAIP1Q13794 54 aa11.66□□□□□ -0.54
MCF2L-203ENST00000375604 SMIM26A0A096LP01 95 aa11.66□□□□□ -0.54
MCF2L-203ENST00000375604 C1orf195Q5TG92 126 aa11.66□□□□□ -0.54
MCF2L-203ENST00000375604 LINC01546A6NGU7 62 aa11.66□□□□□ -0.54
MCF2L-203ENST00000375604 TYMSOSQ8TAI1 123 aa11.65□□□□□ -0.54
MCF2L-203ENST00000375604 FAM229AH3BQW9 127 aa11.65□□□□□ -0.54
MCF2L-203ENST00000375604 DNAH10OSP0CZ25 163 aa11.64□□□□□ -0.55
MCF2L-203ENST00000375604 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
MCF2L-203ENST00000375604 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
MCF2L-203ENST00000375604 hDV103S1A0JD37 113 aa11.63□□□□□ -0.55
MCF2L-203ENST00000375604 Q6ZRP5 223 aa11.63□□□□□ -0.55
MCF2L-203ENST00000375604 IGLV8-61A0A075B6I0 122 aa11.62□□□□□ -0.55
MCF2L-203ENST00000375604 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
MCF2L-203ENST00000375604 CDIP1Q9H305 208 aa11.6□□□□□ -0.55
MCF2L-203ENST00000375604 KRTAP10-3P60369 221 aa11.6□□□□□ -0.55
MCF2L-203ENST00000375604 Q96NJ1 140 aa11.59□□□□□ -0.55
MCF2L-203ENST00000375604 SMCPP49901 116 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-203ENST00000375604 MUC4Q99102 2169 aa11.58□□□□□ -0.56
MCF2L-203ENST00000375604 Q6ZRX8 168 aa11.57□□□□□ -0.56
MCF2L-203ENST00000375604 CXCL6P80162 114 aa11.57□□□□□ -0.56
MCF2L-203ENST00000375604 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
MCF2L-203ENST00000375604 LINC00313P59037 77 aa11.56□□□□□ -0.56
MCF2L-203ENST00000375604 LRRK2Q5S007 2527 aa11.56□□□□□ -0.56
MCF2L-203ENST00000375604 SPAG11AQ6PDA7 123 aa11.54□□□□□ -0.56
MCF2L-203ENST00000375604 SMR3BP02814 79 aaPredicted RBP11.53□□□□□ -0.56
MCF2L-203ENST00000375604 PLA2G1BP04054 148 aaKnown RBP11.53□□□□□ -0.56
MCF2L-203ENST00000375604 A0A0G2JQZ4 141 aa11.53□□□□□ -0.56
MCF2L-203ENST00000375604 A0A1W2PNN7 141 aa11.53□□□□□ -0.56
MCF2L-203ENST00000375604 H3BNG1 76 aa11.52□□□□□ -0.57
MCF2L-203ENST00000375604 IGLV5-45A0A087WSX0 123 aa11.52□□□□□ -0.57
MCF2L-203ENST00000375604 K7EIL1 84 aa11.52□□□□□ -0.57
MCF2L-203ENST00000375604 Q6ZQT0 140 aa11.52□□□□□ -0.57
MCF2L-203ENST00000375604 C5orf42Q9H799 3197 aa11.52□□□□□ -0.57
MCF2L-203ENST00000375604 MYO18BQ8IUG5 2567 aa11.51□□□□□ -0.57
MCF2L-203ENST00000375604 J3QL48 77 aa11.51□□□□□ -0.57
MCF2L-203ENST00000375604 WWC2-AS2Q96NR7 200 aa11.51□□□□□ -0.57
MCF2L-203ENST00000375604 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
MCF2L-203ENST00000375604 Q8NBF4 154 aa11.5□□□□□ -0.57
MCF2L-203ENST00000375604 A0A1B0GU69 56 aa11.5□□□□□ -0.57
MCF2L-203ENST00000375604 PCNTO95613 3336 aa11.49□□□□□ -0.57
MCF2L-203ENST00000375604 C9orf92A6NGG3 77 aa11.49□□□□□ -0.57
MCF2L-203ENST00000375604 GVQW2A0A096LPI5 108 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-203ENST00000375604 BCE1O60756 84 aa11.48□□□□□ -0.57
MCF2L-203ENST00000375604 ANAPC11Q9NYG5 84 aa11.48□□□□□ -0.57
MCF2L-203ENST00000375604 TLN1Q9Y490 2541 aaKnown RBP11.47□□□□□ -0.57
MCF2L-203ENST00000375604 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
MCF2L-203ENST00000375604 CSNK1G2-AS1Q8NCQ2 148 aa11.45□□□□□ -0.58
MCF2L-203ENST00000375604 ABCA12Q86UK0 2595 aa11.43□□□□□ -0.58
MCF2L-203ENST00000375604 ACYP2P14621 99 aa11.42□□□□□ -0.58
MCF2L-203ENST00000375604 DSCR10P59022 87 aa11.41□□□□□ -0.58
MCF2L-203ENST00000375604 FN1P02751 2386 aaKnown RBP11.41□□□□□ -0.58
MCF2L-203ENST00000375604 VPREB1P12018 145 aa11.41□□□□□ -0.58
MCF2L-203ENST00000375604 LITAFQ99732 161 aa11.4□□□□□ -0.59
MCF2L-203ENST00000375604 K7EQZ3 153 aa11.39□□□□□ -0.59
MCF2L-203ENST00000375604 C4orf26Q17RF5 130 aa11.39□□□□□ -0.59
MCF2L-203ENST00000375604 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
MCF2L-203ENST00000375604 PIEZO1Q92508 2521 aa11.39□□□□□ -0.59
MCF2L-203ENST00000375604 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-203ENST00000375604 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
MCF2L-203ENST00000375604 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
MCF2L-203ENST00000375604 TP53AIP1Q9HCN2 124 aa11.37□□□□□ -0.59
MCF2L-203ENST00000375604 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
MCF2L-203ENST00000375604 DOPEY1Q5JWR5 2465 aa11.36□□□□□ -0.59
MCF2L-203ENST00000375604 CEP350Q5VT06 3117 aa11.36□□□□□ -0.59
MCF2L-203ENST00000375604 CASC10Q5T4H9 136 aa11.36□□□□□ -0.59
MCF2L-203ENST00000375604 ANKRD11Q6UB99 2663 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-203ENST00000375604 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
MCF2L-203ENST00000375604 IGLV6-57P01721 117 aa11.35□□□□□ -0.59
MCF2L-203ENST00000375604 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
MCF2L-203ENST00000375604 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
MCF2L-203ENST00000375604 TLN2Q9Y4G6 2542 aa11.34□□□□□ -0.59
MCF2L-203ENST00000375604 C9orf129Q5T035 196 aaKnown RBP11.33□□□□□ -0.6
MCF2L-203ENST00000375604 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
MCF2L-203ENST00000375604 MYO9AB2RTY4 2548 aa11.33□□□□□ -0.6
MCF2L-203ENST00000375604 ZNF462Q96JM2 2506 aa11.33□□□□□ -0.6
MCF2L-203ENST00000375604 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-203ENST00000375604 A0A096LNT2 108 aa11.31□□□□□ -0.6
MCF2L-203ENST00000375604 TRAV22A0A0B4J277 110 aa11.31□□□□□ -0.6
MCF2L-203ENST00000375604 COX6B2Q6YFQ2 88 aa11.31□□□□□ -0.6
MCF2L-203ENST00000375604 IGFL1Q6UW32 110 aa11.29□□□□□ -0.6
MCF2L-203ENST00000375604 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
MCF2L-203ENST00000375604 ANKRD17O75179 2603 aaKnown RBP11.27□□□□□ -0.61
MCF2L-203ENST00000375604 A8MWP4 228 aa11.27□□□□□ -0.61
MCF2L-203ENST00000375604 A0A087WTM6 91 aa11.26□□□□□ -0.61
MCF2L-203ENST00000375604 CEP295Q9C0D2 2601 aa11.25□□□□□ -0.61
MCF2L-203ENST00000375604 LINC00304Q8N9R0 145 aa11.23□□□□□ -0.61
MCF2L-203ENST00000375604 MRPL34Q9BQ48 92 aaKnown RBP11.23□□□□□ -0.61
MCF2L-203ENST00000375604 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
MCF2L-203ENST00000375604 SETD2Q9BYW2 2564 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-203ENST00000375604 KRTAP1-3Q8IUG1 177 aa11.22□□□□□ -0.61
MCF2L-203ENST00000375604 USP9XQ93008 2570 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-203ENST00000375604 KCNQ1DNQ9H478 68 aa11.21□□□□□ -0.61
MCF2L-203ENST00000375604 POLQO75417 2590 aa11.21□□□□□ -0.62
MCF2L-203ENST00000375604 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms