RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
CCDC40-203ENST00000374877 LAMTOR3Q9UHA4 124 aa7.59□□□□□ -1.19
CCDC40-203ENST00000374877 NDUFC2O95298 119 aa7.59□□□□□ -1.19
CCDC40-203ENST00000374877 C20orf197Q8N268 126 aa7.59□□□□□ -1.19
CCDC40-203ENST00000374877 Q8N3U1 123 aa7.59□□□□□ -1.19
CCDC40-203ENST00000374877 OXTP01178 125 aa7.58□□□□□ -1.2
CCDC40-203ENST00000374877 ANGP03950 147 aaKnown RBP7.58□□□□□ -1.2
CCDC40-203ENST00000374877 KIAA0087Q14695 138 aa7.58□□□□□ -1.2
CCDC40-203ENST00000374877 SPATA3Q8NHX4 192 aa7.58□□□□□ -1.2
CCDC40-203ENST00000374877 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
CCDC40-203ENST00000374877 Q8NDZ9 215 aa7.58□□□□□ -1.2
CCDC40-203ENST00000374877 CD164L2Q6UWJ8 174 aa7.58□□□□□ -1.2
CCDC40-203ENST00000374877 RBM3P98179 157 aaKnown RBP7.57□□□□□ -1.2
CCDC40-203ENST00000374877 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
CCDC40-203ENST00000374877 COX17Q14061 63 aa7.57□□□□□ -1.2
CCDC40-203ENST00000374877 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
CCDC40-203ENST00000374877 HAMPP81172 84 aa7.56□□□□□ -1.2
CCDC40-203ENST00000374877 REG3AQ06141 175 aa7.56□□□□□ -1.2
CCDC40-203ENST00000374877 LYPD5Q6UWN5 251 aa7.55□□□□□ -1.2
CCDC40-203ENST00000374877 M0R2N4 97 aa7.55□□□□□ -1.2
CCDC40-203ENST00000374877 Q6ZQT0 140 aa7.55□□□□□ -1.2
CCDC40-203ENST00000374877 DEFB4AO15263 64 aa7.55□□□□□ -1.2
CCDC40-203ENST00000374877 C6orf223Q8N319 242 aa7.55□□□□□ -1.2
CCDC40-203ENST00000374877 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
CCDC40-203ENST00000374877 C10orf25Q5T742 122 aa7.54□□□□□ -1.2
CCDC40-203ENST00000374877 UNQ6190/PRO20217Q6UXQ8 127 aa7.54□□□□□ -1.2
CCDC40-203ENST00000374877 TRBV10-3A0A0K0K1G6 114 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 Q6ZQY7 126 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 LINC00612Q8N6U2 182 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 MAST4O15021 2626 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
CCDC40-203ENST00000374877 IGHV4-28A0A0C4DH34 117 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 SPAG11BQ08648 103 aa7.53□□□□□ -1.2
CCDC40-203ENST00000374877 LINC01547P58512 204 aaPredicted RBP7.52□□□□□ -1.21
CCDC40-203ENST00000374877 X6R8D5 127 aa7.52□□□□□ -1.21
CCDC40-203ENST00000374877 EGFEM1PQ0D2K5 195 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 HRCT1Q6UXD1 115 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 Q6ZVQ6 151 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 NDUFC2-KCTD14E9PQ53 114 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 ATRQ13535 2644 aa7.51□□□□□ -1.21
CCDC40-203ENST00000374877 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
CCDC40-203ENST00000374877 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 Q5XG85 94 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 SCXQ7RTU7 201 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
CCDC40-203ENST00000374877 HTN3P15516 51 aa7.48□□□□□ -1.21
CCDC40-203ENST00000374877 DEFB135Q30KP9 77 aa7.48□□□□□ -1.21
CCDC40-203ENST00000374877 APOC4P55056 127 aa7.48□□□□□ -1.21
CCDC40-203ENST00000374877 FBN1P35555 2871 aaKnown RBP7.47□□□□□ -1.21
CCDC40-203ENST00000374877 IGLV6-57P01721 117 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 OXLD1Q5BKU9 147 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 H7BZZ5 65 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 DAD1P61803 113 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 KLK12Q9UKR0 248 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 DIRC1Q969H9 104 aa7.47□□□□□ -1.21
CCDC40-203ENST00000374877 LYRM9A8MSI8 78 aa7.46□□□□□ -1.21
CCDC40-203ENST00000374877 MUC7Q8TAX7 377 aa7.46□□□□□ -1.21
CCDC40-203ENST00000374877 RMI2Q96E14 147 aa7.46□□□□□ -1.22
CCDC40-203ENST00000374877 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
CCDC40-203ENST00000374877 A0A0J9YWU9 116 aa7.45□□□□□ -1.22
CCDC40-203ENST00000374877 IGHV4-30-4P0DP06 118 aa7.45□□□□□ -1.22
CCDC40-203ENST00000374877 PDE6GP18545 87 aa7.45□□□□□ -1.22
CCDC40-203ENST00000374877 MDFIQ99750 246 aa7.45□□□□□ -1.22
CCDC40-203ENST00000374877 BCE1O60756 84 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 CXCL6P80162 114 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 F8WEM9 126 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 ZNF73O43830 326 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-203ENST00000374877 COX7BP24311 80 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 KLKP1Q107X0 134 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
CCDC40-203ENST00000374877 TM2D3Q9BRN9 247 aa7.42□□□□□ -1.22
CCDC40-203ENST00000374877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-203ENST00000374877 VWFP04275 2813 aa7.41□□□□□ -1.22
CCDC40-203ENST00000374877 H3BQ85 93 aa7.41□□□□□ -1.22
CCDC40-203ENST00000374877 KPRPQ5T749 579 aaPredicted RBP7.41□□□□□ -1.22
CCDC40-203ENST00000374877 LELP1Q5T871 98 aa7.41□□□□□ -1.22
CCDC40-203ENST00000374877 ANK2Q01484 3957 aa7.41□□□□□ -1.22
CCDC40-203ENST00000374877 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.22
CCDC40-203ENST00000374877 HIGD2BQ4VC39 106 aa7.4□□□□□ -1.22
CCDC40-203ENST00000374877 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
CCDC40-203ENST00000374877 MIFP14174 115 aa7.39□□□□□ -1.23
CCDC40-203ENST00000374877 ELOF1P60002 83 aaKnown RBP7.39□□□□□ -1.23
CCDC40-203ENST00000374877 Q8N9L7 120 aa7.39□□□□□ -1.23
CCDC40-203ENST00000374877 PRR34Q9NV39 138 aa7.39□□□□□ -1.23
CCDC40-203ENST00000374877 CAMK2N2Q96S95 79 aa7.38□□□□□ -1.23
CCDC40-203ENST00000374877 GVQW2A0A096LPI5 108 aaPredicted RBP7.38□□□□□ -1.23
CCDC40-203ENST00000374877 STAB1Q9NY15 2570 aa7.38□□□□□ -1.23
CCDC40-203ENST00000374877 NREPQ16612 68 aa7.37□□□□□ -1.23
CCDC40-203ENST00000374877 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
CCDC40-203ENST00000374877 COL6A5A8TX70 2615 aa7.37□□□□□ -1.23
CCDC40-203ENST00000374877 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
CCDC40-203ENST00000374877 TRRAPQ9Y4A5 3859 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms