RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 TRBV7-6A0A0J9YX20 115 aa12.03□□□□□ -0.48
LDLRAP1-201ENST00000374338 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.48
LDLRAP1-201ENST00000374338 UBE2L6O14933 153 aa12.02□□□□□ -0.49
LDLRAP1-201ENST00000374338 IGLV1-51P01701 117 aa12.02□□□□□ -0.49
LDLRAP1-201ENST00000374338 RBM3P98179 157 aaKnown RBP12.02□□□□□ -0.49
LDLRAP1-201ENST00000374338 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 J3QKU1 62 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 BCE1O60756 84 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 CCL18P55774 89 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 IL17DQ8TAD2 202 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 UBL5Q9BZL1 73 aa12.01□□□□□ -0.49
LDLRAP1-201ENST00000374338 JMJD7-PLA2G4BH0Y9G9 81 aa12□□□□□ -0.49
LDLRAP1-201ENST00000374338 PAX4O43316 350 aa12□□□□□ -0.49
LDLRAP1-201ENST00000374338 CDC42SE2Q9NRR3 84 aa12□□□□□ -0.49
LDLRAP1-201ENST00000374338 PRR3P79522 188 aaKnown RBP11.99□□□□□ -0.49
LDLRAP1-201ENST00000374338 TRAV10A0A0B4J240 114 aa11.99□□□□□ -0.49
LDLRAP1-201ENST00000374338 CSNK1G2-AS1Q8NCQ2 148 aa11.98□□□□□ -0.49
LDLRAP1-201ENST00000374338 INAFM1C9JVW0 142 aa11.98□□□□□ -0.49
LDLRAP1-201ENST00000374338 FBN1P35555 2871 aaKnown RBP11.98□□□□□ -0.49
LDLRAP1-201ENST00000374338 STAB1Q9NY15 2570 aa11.98□□□□□ -0.49
LDLRAP1-201ENST00000374338 LY6G6DO95868 133 aa11.97□□□□□ -0.49
LDLRAP1-201ENST00000374338 Q8N3U1 123 aa11.96□□□□□ -0.49
LDLRAP1-201ENST00000374338 COX7B2Q8TF08 81 aa11.96□□□□□ -0.49
LDLRAP1-201ENST00000374338 C16orf74Q96GX8 76 aa11.94□□□□□ -0.5
LDLRAP1-201ENST00000374338 LINC00167Q96N53 147 aa11.94□□□□□ -0.5
LDLRAP1-201ENST00000374338 NOTCH1P46531 2555 aa11.93□□□□□ -0.5
LDLRAP1-201ENST00000374338 DEFB135Q30KP9 77 aa11.93□□□□□ -0.5
LDLRAP1-201ENST00000374338 F8P00451 2351 aa11.93□□□□□ -0.5
LDLRAP1-201ENST00000374338 TMEM256-PLSCR3K7ERE1 68 aa11.92□□□□□ -0.5
LDLRAP1-201ENST00000374338 FAM229BQ4G0N7 80 aa11.91□□□□□ -0.5
LDLRAP1-201ENST00000374338 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
LDLRAP1-201ENST00000374338 GYPEP15421 78 aa11.9□□□□□ -0.5
LDLRAP1-201ENST00000374338 MPLKIPQ8TAP9 179 aa11.9□□□□□ -0.5
LDLRAP1-201ENST00000374338 LINC01547P58512 204 aaPredicted RBP11.9□□□□□ -0.5
LDLRAP1-201ENST00000374338 Q8N814 137 aa11.9□□□□□ -0.5
LDLRAP1-201ENST00000374338 TRBV6-4A0A1B0GX49 114 aa11.9□□□□□ -0.51
LDLRAP1-201ENST00000374338 NDUFC1O43677 76 aa11.9□□□□□ -0.51
LDLRAP1-201ENST00000374338 MAST4O15021 2626 aa11.89□□□□□ -0.51
LDLRAP1-201ENST00000374338 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
LDLRAP1-201ENST00000374338 HTN3P15516 51 aa11.89□□□□□ -0.51
LDLRAP1-201ENST00000374338 ATP5EP56381 51 aaPredicted RBP11.88□□□□□ -0.51
LDLRAP1-201ENST00000374338 HAMPP81172 84 aa11.88□□□□□ -0.51
LDLRAP1-201ENST00000374338 ANK2Q01484 3957 aa11.88□□□□□ -0.51
LDLRAP1-201ENST00000374338 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
LDLRAP1-201ENST00000374338 TM2D3Q9BRN9 247 aa11.87□□□□□ -0.51
LDLRAP1-201ENST00000374338 IBA57-AS1B1ANH7 110 aa11.87□□□□□ -0.51
LDLRAP1-201ENST00000374338 M0R2N4 97 aa11.86□□□□□ -0.51
LDLRAP1-201ENST00000374338 MIFP14174 115 aa11.86□□□□□ -0.51
LDLRAP1-201ENST00000374338 TRBV7-4A0A0J9YYF1 115 aa11.85□□□□□ -0.51
LDLRAP1-201ENST00000374338 Q6ZQT0 140 aa11.85□□□□□ -0.51
LDLRAP1-201ENST00000374338 TENM3Q9P273 2699 aa11.85□□□□□ -0.51
LDLRAP1-201ENST00000374338 Q6ZVQ6 151 aa11.84□□□□□ -0.51
LDLRAP1-201ENST00000374338 X6R8D5 127 aa11.83□□□□□ -0.51
LDLRAP1-201ENST00000374338 NANOS2P60321 138 aaKnown RBP11.83□□□□□ -0.52
LDLRAP1-201ENST00000374338 IGHV3OR16-9A0A0B4J2B5 98 aa11.82□□□□□ -0.52
LDLRAP1-201ENST00000374338 C6orf226Q5I0X4 101 aa11.82□□□□□ -0.52
LDLRAP1-201ENST00000374338 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
LDLRAP1-201ENST00000374338 C9orf116Q5BN46 136 aaPredicted RBP11.79□□□□□ -0.52
LDLRAP1-201ENST00000374338 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
LDLRAP1-201ENST00000374338 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
LDLRAP1-201ENST00000374338 CXCL6P80162 114 aa11.78□□□□□ -0.52
LDLRAP1-201ENST00000374338 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
LDLRAP1-201ENST00000374338 LOC110117498A0A087WWA1 95 aa11.77□□□□□ -0.52
LDLRAP1-201ENST00000374338 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.52
LDLRAP1-201ENST00000374338 SCXQ7RTU7 201 aa11.77□□□□□ -0.52
LDLRAP1-201ENST00000374338 NREPQ16612 68 aa11.76□□□□□ -0.53
LDLRAP1-201ENST00000374338 NBEAL1Q6ZS30 2694 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 IGHV4-28A0A0C4DH34 117 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 PMAIP1Q13794 54 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 ESRGQ1W209 222 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 Q8NDZ9 215 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 C6orf99Q4VX62 202 aa11.75□□□□□ -0.53
LDLRAP1-201ENST00000374338 COL6A5A8TX70 2615 aa11.74□□□□□ -0.53
LDLRAP1-201ENST00000374338 A0A087WZ39 114 aa11.74□□□□□ -0.53
LDLRAP1-201ENST00000374338 LAMTOR3Q9UHA4 124 aa11.74□□□□□ -0.53
LDLRAP1-201ENST00000374338 ANGP03950 147 aaKnown RBP11.73□□□□□ -0.53
LDLRAP1-201ENST00000374338 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
LDLRAP1-201ENST00000374338 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
LDLRAP1-201ENST00000374338 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
LDLRAP1-201ENST00000374338 RETNQ9HD89 108 aa11.72□□□□□ -0.53
LDLRAP1-201ENST00000374338 PRR15Q8IV56 129 aa11.71□□□□□ -0.53
LDLRAP1-201ENST00000374338 DAD1P61803 113 aa11.7□□□□□ -0.54
LDLRAP1-201ENST00000374338 OXLD1Q5BKU9 147 aa11.7□□□□□ -0.54
LDLRAP1-201ENST00000374338 BPY2O14599 106 aa11.7□□□□□ -0.54
LDLRAP1-201ENST00000374338 LINC00575Q6W349 94 aa11.7□□□□□ -0.54
LDLRAP1-201ENST00000374338 Q6ZTC4 211 aa11.7□□□□□ -0.54
LDLRAP1-201ENST00000374338 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
LDLRAP1-201ENST00000374338 FUSP35637 526 aaKnown RBP eCLIP11.69□□□□□ -0.54
LDLRAP1-201ENST00000374338 PRYO14603 147 aa11.68□□□□□ -0.54
LDLRAP1-201ENST00000374338 C9orf66Q5T8R8 295 aa11.67□□□□□ -0.54
LDLRAP1-201ENST00000374338 Q6ZRU5 148 aa11.67□□□□□ -0.54
LDLRAP1-201ENST00000374338 IGHV4-30-4P0DP06 118 aa11.65□□□□□ -0.54
LDLRAP1-201ENST00000374338 CHCHD10Q8WYQ3 142 aaPredicted RBP11.65□□□□□ -0.54
LDLRAP1-201ENST00000374338 PDE6GP18545 87 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 REG3AQ06141 175 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 KLK12Q9UKR0 248 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 Q8N9L7 120 aa11.63□□□□□ -0.55
LDLRAP1-201ENST00000374338 C10orf25Q5T742 122 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms