RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 CSNK1G2-AS1Q8NCQ2 148 aa12.24□□□□□ -0.45
TRAF3IP1-201ENST00000373327 SBSPONQ8IVN8 264 aa12.23□□□□□ -0.45
TRAF3IP1-201ENST00000373327 UBE2BP63146 152 aa12.23□□□□□ -0.45
TRAF3IP1-201ENST00000373327 KRTAP1-1Q07627 177 aa12.22□□□□□ -0.45
TRAF3IP1-201ENST00000373327 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
TRAF3IP1-201ENST00000373327 GHRHP01286 108 aa12.22□□□□□ -0.45
TRAF3IP1-201ENST00000373327 BAHCC1Q9P281 2608 aa12.21□□□□□ -0.46
TRAF3IP1-201ENST00000373327 JMJD7-PLA2G4BH0Y9G9 81 aa12.21□□□□□ -0.46
TRAF3IP1-201ENST00000373327 COX7BP24311 80 aa12.21□□□□□ -0.46
TRAF3IP1-201ENST00000373327 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
TRAF3IP1-201ENST00000373327 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
TRAF3IP1-201ENST00000373327 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
TRAF3IP1-201ENST00000373327 A0A1B0GUV1 79 aa12.18□□□□□ -0.46
TRAF3IP1-201ENST00000373327 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
TRAF3IP1-201ENST00000373327 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP1-201ENST00000373327 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
TRAF3IP1-201ENST00000373327 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
TRAF3IP1-201ENST00000373327 LINC00846Q9NV44 126 aa12.15□□□□□ -0.46
TRAF3IP1-201ENST00000373327 FAM19A5Q7Z5A7 132 aaPredicted RBP12.15□□□□□ -0.46
TRAF3IP1-201ENST00000373327 Q8N814 137 aa12.15□□□□□ -0.46
TRAF3IP1-201ENST00000373327 SYCNQ0VAF6 134 aa12.14□□□□□ -0.47
TRAF3IP1-201ENST00000373327 IL17DQ8TAD2 202 aa12.14□□□□□ -0.47
TRAF3IP1-201ENST00000373327 C3orf84H3BNL1 204 aa12.13□□□□□ -0.47
TRAF3IP1-201ENST00000373327 A0A096LNI7 61 aa12.13□□□□□ -0.47
TRAF3IP1-201ENST00000373327 F8WEM9 126 aa12.13□□□□□ -0.47
TRAF3IP1-201ENST00000373327 ATOX1O00244 68 aa12.13□□□□□ -0.47
TRAF3IP1-201ENST00000373327 UPK3BQ9BT76 320 aa12.12□□□□□ -0.47
TRAF3IP1-201ENST00000373327 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
TRAF3IP1-201ENST00000373327 C20orf197Q8N268 126 aa12.1□□□□□ -0.47
TRAF3IP1-201ENST00000373327 Q6ZRU5 148 aa12.09□□□□□ -0.47
TRAF3IP1-201ENST00000373327 Q8NAQ8 132 aa12.09□□□□□ -0.47
TRAF3IP1-201ENST00000373327 KLK5Q9Y337 293 aaPredicted RBP12.09□□□□□ -0.47
TRAF3IP1-201ENST00000373327 HIGD2AQ9BW72 106 aa12.08□□□□□ -0.47
TRAF3IP1-201ENST00000373327 TENM4Q6N022 2769 aa12.08□□□□□ -0.48
TRAF3IP1-201ENST00000373327 FAM240AA0A1B0GVK7 77 aa12.08□□□□□ -0.48
TRAF3IP1-201ENST00000373327 NREPQ16612 68 aa12.08□□□□□ -0.48
TRAF3IP1-201ENST00000373327 NBPF19A0A087WUL8 3843 aa12.07□□□□□ -0.48
TRAF3IP1-201ENST00000373327 USP17L23D6RBM5 183 aa12.07□□□□□ -0.48
TRAF3IP1-201ENST00000373327 C9orf129Q5T035 196 aaKnown RBP12.07□□□□□ -0.48
TRAF3IP1-201ENST00000373327 COX17Q14061 63 aa12.07□□□□□ -0.48
TRAF3IP1-201ENST00000373327 VWFP04275 2813 aa12.07□□□□□ -0.48
TRAF3IP1-201ENST00000373327 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
TRAF3IP1-201ENST00000373327 CCKP06307 115 aa12.06□□□□□ -0.48
TRAF3IP1-201ENST00000373327 RMI2Q96E14 147 aa12.06□□□□□ -0.48
TRAF3IP1-201ENST00000373327 ESRGQ1W209 222 aa12.06□□□□□ -0.48
TRAF3IP1-201ENST00000373327 SMCR5Q8TEV8 140 aa12.04□□□□□ -0.48
TRAF3IP1-201ENST00000373327 C6orf48Q9UBA6 75 aa12.04□□□□□ -0.48
TRAF3IP1-201ENST00000373327 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
TRAF3IP1-201ENST00000373327 TENM1Q9UKZ4 2725 aa12.03□□□□□ -0.48
TRAF3IP1-201ENST00000373327 M0QXV9 152 aa12.02□□□□□ -0.49
TRAF3IP1-201ENST00000373327 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.49
TRAF3IP1-201ENST00000373327 UQCRQO14949 82 aa12.01□□□□□ -0.49
TRAF3IP1-201ENST00000373327 KRTAP24-1Q3LI83 254 aa12.01□□□□□ -0.49
TRAF3IP1-201ENST00000373327 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.49
TRAF3IP1-201ENST00000373327 M0R2N4 97 aa12□□□□□ -0.49
TRAF3IP1-201ENST00000373327 M0R378 163 aa12□□□□□ -0.49
TRAF3IP1-201ENST00000373327 LINC00575Q6W349 94 aa11.99□□□□□ -0.49
TRAF3IP1-201ENST00000373327 Q6Q795 121 aa11.99□□□□□ -0.49
TRAF3IP1-201ENST00000373327 PPDPFQ9H3Y8 114 aa11.99□□□□□ -0.49
TRAF3IP1-201ENST00000373327 SNURFQ9Y675 71 aa11.98□□□□□ -0.49
TRAF3IP1-201ENST00000373327 TRAV10A0A0B4J240 114 aa11.97□□□□□ -0.49
TRAF3IP1-201ENST00000373327 IMUPQ9GZP8 106 aa11.97□□□□□ -0.49
TRAF3IP1-201ENST00000373327 NDUFC2O95298 119 aa11.96□□□□□ -0.5
TRAF3IP1-201ENST00000373327 EGFEM1PQ0D2K5 195 aa11.96□□□□□ -0.5
TRAF3IP1-201ENST00000373327 KIAA0087Q14695 138 aa11.96□□□□□ -0.5
TRAF3IP1-201ENST00000373327 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
TRAF3IP1-201ENST00000373327 Q8N9L7 120 aa11.95□□□□□ -0.5
TRAF3IP1-201ENST00000373327 NDUFC2-KCTD14E9PQ53 114 aa11.94□□□□□ -0.5
TRAF3IP1-201ENST00000373327 BPY2O14599 106 aa11.94□□□□□ -0.5
TRAF3IP1-201ENST00000373327 COX7CP15954 63 aa11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 KRTAP10-11P60412 298 aa11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 OTOGQ6ZRI0 2925 aa11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 Q6JHZ5 121 aa11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 FBN1P35555 2871 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP1-201ENST00000373327 NHLRC4P0CG21 123 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP1-201ENST00000373327 PDZD2O15018 2839 aa11.92□□□□□ -0.5
TRAF3IP1-201ENST00000373327 SERP2Q8N6R1 65 aa11.91□□□□□ -0.5
TRAF3IP1-201ENST00000373327 TRBV7-7A0A0K0K1E9 115 aa11.9□□□□□ -0.5
TRAF3IP1-201ENST00000373327 UBE2AP49459 152 aa11.88□□□□□ -0.51
TRAF3IP1-201ENST00000373327 PDE6GP18545 87 aa11.87□□□□□ -0.51
TRAF3IP1-201ENST00000373327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.87□□□□□ -0.51
TRAF3IP1-201ENST00000373327 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
TRAF3IP1-201ENST00000373327 LINC00612Q8N6U2 182 aa11.87□□□□□ -0.51
TRAF3IP1-201ENST00000373327 Q6ZVQ6 151 aa11.86□□□□□ -0.51
TRAF3IP1-201ENST00000373327 DEFB116Q30KQ4 102 aa11.86□□□□□ -0.51
TRAF3IP1-201ENST00000373327 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
TRAF3IP1-201ENST00000373327 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
TRAF3IP1-201ENST00000373327 Q6ZRP5 223 aa11.84□□□□□ -0.51
TRAF3IP1-201ENST00000373327 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.51
TRAF3IP1-201ENST00000373327 FAM168BA1KXE4 195 aa11.83□□□□□ -0.52
TRAF3IP1-201ENST00000373327 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
TRAF3IP1-201ENST00000373327 J3KT08 172 aa11.82□□□□□ -0.52
TRAF3IP1-201ENST00000373327 PRLHP81277 87 aa11.81□□□□□ -0.52
TRAF3IP1-201ENST00000373327 Q8NDZ9 215 aa11.81□□□□□ -0.52
TRAF3IP1-201ENST00000373327 LINC01547P58512 204 aaPredicted RBP11.81□□□□□ -0.52
TRAF3IP1-201ENST00000373327 ATP5EP2Q5VTU8 51 aa11.8□□□□□ -0.52
TRAF3IP1-201ENST00000373327 PRR4Q16378 134 aa11.79□□□□□ -0.52
TRAF3IP1-201ENST00000373327 TENM3Q9P273 2699 aa11.79□□□□□ -0.52
TRAF3IP1-201ENST00000373327 LINC01556Q5JQF7 62 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms