RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 S100A6P06703 90 aa10.68□□□□□ -0.7
TRAPPC3-202ENST00000373162 VPREB1P12018 145 aa10.68□□□□□ -0.7
TRAPPC3-202ENST00000373162 LPAP08519 4548 aa10.68□□□□□ -0.7
TRAPPC3-202ENST00000373162 RPL37AP8A6NKH3 93 aa10.67□□□□□ -0.7
TRAPPC3-202ENST00000373162 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
TRAPPC3-202ENST00000373162 CHTOPQ9Y3Y2 248 aaKnown RBP10.67□□□□□ -0.7
TRAPPC3-202ENST00000373162 H0Y8G0 127 aa10.66□□□□□ -0.7
TRAPPC3-202ENST00000373162 RPL13AP40429 203 aaKnown RBP10.66□□□□□ -0.7
TRAPPC3-202ENST00000373162 SND1-IT1Q9HBX3 110 aa10.66□□□□□ -0.7
TRAPPC3-202ENST00000373162 RPL28P46779 137 aaKnown RBP10.65□□□□□ -0.7
TRAPPC3-202ENST00000373162 COX17Q14061 63 aa10.65□□□□□ -0.7
TRAPPC3-202ENST00000373162 MAP1LC3CQ9BXW4 147 aa10.65□□□□□ -0.7
TRAPPC3-202ENST00000373162 A0A087X002 238 aa10.64□□□□□ -0.71
TRAPPC3-202ENST00000373162 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
TRAPPC3-202ENST00000373162 GAGE10A6NGK3 116 aa10.64□□□□□ -0.71
TRAPPC3-202ENST00000373162 PFN2P35080 140 aa10.64□□□□□ -0.71
TRAPPC3-202ENST00000373162 HIST3H2BBQ8N257 126 aa10.64□□□□□ -0.71
TRAPPC3-202ENST00000373162 TMEM170BQ5T4T1 132 aa10.63□□□□□ -0.71
TRAPPC3-202ENST00000373162 S100A2P29034 98 aa10.62□□□□□ -0.71
TRAPPC3-202ENST00000373162 SNRPEP62304 92 aaKnown RBP10.62□□□□□ -0.71
TRAPPC3-202ENST00000373162 SFTA2Q6UW10 78 aa10.62□□□□□ -0.71
TRAPPC3-202ENST00000373162 NKAPP1Q8N9T2 125 aa10.62□□□□□ -0.71
TRAPPC3-202ENST00000373162 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
TRAPPC3-202ENST00000373162 C5orf52A6NGY3 159 aa10.6□□□□□ -0.71
TRAPPC3-202ENST00000373162 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 C3orf79P0CE67 100 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 PET117Q6UWS5 81 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 HIST1H2BLQ99880 126 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 PMCHL2Q9BQD1 86 aa10.59□□□□□ -0.71
TRAPPC3-202ENST00000373162 KRTDAPP60985 99 aa10.58□□□□□ -0.72
TRAPPC3-202ENST00000373162 TMEM126AQ9H061 195 aa10.58□□□□□ -0.72
TRAPPC3-202ENST00000373162 M0R378 163 aa10.57□□□□□ -0.72
TRAPPC3-202ENST00000373162 DPM2O94777 84 aa10.57□□□□□ -0.72
TRAPPC3-202ENST00000373162 PLNP26678 52 aa10.57□□□□□ -0.72
TRAPPC3-202ENST00000373162 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
TRAPPC3-202ENST00000373162 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
TRAPPC3-202ENST00000373162 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
TRAPPC3-202ENST00000373162 IGKCP01834 107 aa10.55□□□□□ -0.72
TRAPPC3-202ENST00000373162 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
TRAPPC3-202ENST00000373162 TMA7Q9Y2S6 64 aaKnown RBP10.55□□□□□ -0.72
TRAPPC3-202ENST00000373162 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
TRAPPC3-202ENST00000373162 CRYGAP11844 174 aa10.53□□□□□ -0.72
TRAPPC3-202ENST00000373162 UBE2AP49459 152 aa10.53□□□□□ -0.72
TRAPPC3-202ENST00000373162 PRLHP81277 87 aa10.53□□□□□ -0.72
TRAPPC3-202ENST00000373162 FAM229BQ4G0N7 80 aa10.53□□□□□ -0.72
TRAPPC3-202ENST00000373162 C20orf202A1L168 122 aa10.52□□□□□ -0.73
TRAPPC3-202ENST00000373162 TSPEAR-AS2P59090 65 aa10.51□□□□□ -0.73
TRAPPC3-202ENST00000373162 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
TRAPPC3-202ENST00000373162 LINC00158P58513 81 aa10.5□□□□□ -0.73
TRAPPC3-202ENST00000373162 TYMSOSQ8TAI1 123 aa10.5□□□□□ -0.73
TRAPPC3-202ENST00000373162 HERVK_113P61574 105 aa10.49□□□□□ -0.73
TRAPPC3-202ENST00000373162 FAM19A1Q7Z5A9 133 aa10.49□□□□□ -0.73
TRAPPC3-202ENST00000373162 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
TRAPPC3-202ENST00000373162 SPRR1AP35321 89 aa10.48□□□□□ -0.73
TRAPPC3-202ENST00000373162 HERV-K104P63124 156 aa10.48□□□□□ -0.73
TRAPPC3-202ENST00000373162 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
TRAPPC3-202ENST00000373162 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
TRAPPC3-202ENST00000373162 KRTAP4-16G5E9R7 235 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC3-202ENST00000373162 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
TRAPPC3-202ENST00000373162 LOC107984156A0A0G2JMH3 177 aa10.46□□□□□ -0.73
TRAPPC3-202ENST00000373162 AKR1D1P51857 326 aa10.46□□□□□ -0.73
TRAPPC3-202ENST00000373162 ARL17AQ8IVW1 177 aa10.46□□□□□ -0.73
TRAPPC3-202ENST00000373162 LEPROTO15243 131 aa10.45□□□□□ -0.74
TRAPPC3-202ENST00000373162 MUC2Q02817 5179 aa10.45□□□□□ -0.74
TRAPPC3-202ENST00000373162 TSPAN13O95857 204 aa10.44□□□□□ -0.74
TRAPPC3-202ENST00000373162 PRR4Q16378 134 aa10.44□□□□□ -0.74
TRAPPC3-202ENST00000373162 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
TRAPPC3-202ENST00000373162 KCNQ1DNQ9H478 68 aa10.44□□□□□ -0.74
TRAPPC3-202ENST00000373162 IGKV2D-26A0A0A0MRZ7 120 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 MYMXA0A1B0GTQ4 84 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 E9PLD3 99 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 PRYO14603 147 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 BOD1L2Q8IYS8 172 aa10.43□□□□□ -0.74
TRAPPC3-202ENST00000373162 J3QQQ9 107 aa10.42□□□□□ -0.74
TRAPPC3-202ENST00000373162 LINC00337Q8N6G1 96 aa10.42□□□□□ -0.74
TRAPPC3-202ENST00000373162 LINC00587B1AMM8 73 aa10.41□□□□□ -0.74
TRAPPC3-202ENST00000373162 SCGB1D1O95968 90 aa10.41□□□□□ -0.74
TRAPPC3-202ENST00000373162 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
TRAPPC3-202ENST00000373162 NCR3O14931 201 aa10.4□□□□□ -0.74
TRAPPC3-202ENST00000373162 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
TRAPPC3-202ENST00000373162 CTAG1AP78358 180 aa10.4□□□□□ -0.74
TRAPPC3-202ENST00000373162 LINC00304Q8N9R0 145 aa10.4□□□□□ -0.74
TRAPPC3-202ENST00000373162 C3orf22Q8N5N4 141 aa10.39□□□□□ -0.75
TRAPPC3-202ENST00000373162 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
TRAPPC3-202ENST00000373162 TRBV10-3A0A0K0K1G6 114 aa10.38□□□□□ -0.75
TRAPPC3-202ENST00000373162 NMUP48645 174 aa10.38□□□□□ -0.75
TRAPPC3-202ENST00000373162 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
TRAPPC3-202ENST00000373162 DAND5Q8N907 189 aa10.37□□□□□ -0.75
TRAPPC3-202ENST00000373162 SMCR5Q8TEV8 140 aa10.36□□□□□ -0.75
TRAPPC3-202ENST00000373162 TRBV10-2A0A0K0K1G8 114 aa10.35□□□□□ -0.75
TRAPPC3-202ENST00000373162 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC3-202ENST00000373162 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
TRAPPC3-202ENST00000373162 EIF4EBP3O60516 100 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC3-202ENST00000373162 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
TRAPPC3-202ENST00000373162 B5MCH6 92 aa10.33□□□□□ -0.76
TRAPPC3-202ENST00000373162 NDUFC2O95298 119 aa10.32□□□□□ -0.76
TRAPPC3-202ENST00000373162 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
TRAPPC3-202ENST00000373162 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms