RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 H3BNG1 76 aa6.74□□□□□ -1.33
COL4A6-202ENST00000372216 LINC00313P59037 77 aa6.74□□□□□ -1.33
COL4A6-202ENST00000372216 LINC00167Q96N53 147 aa6.74□□□□□ -1.33
COL4A6-202ENST00000372216 TRAV7A0A075B6U4 112 aa6.73□□□□□ -1.33
COL4A6-202ENST00000372216 SPINT4Q6UDR6 99 aa6.73□□□□□ -1.33
COL4A6-202ENST00000372216 IMUPQ9GZP8 106 aa6.73□□□□□ -1.33
COL4A6-202ENST00000372216 Q8NAQ8 132 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 ACYP2P14621 99 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 APLNQ9ULZ1 77 aa6.72□□□□□ -1.33
COL4A6-202ENST00000372216 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.33
COL4A6-202ENST00000372216 ABCA2Q9BZC7 2435 aa6.71□□□□□ -1.33
COL4A6-202ENST00000372216 C6orf48Q9UBA6 75 aa6.71□□□□□ -1.34
COL4A6-202ENST00000372216 LINC01546A6NGU7 62 aa6.71□□□□□ -1.34
COL4A6-202ENST00000372216 ST20-AS1Q8NBB2 130 aa6.71□□□□□ -1.34
COL4A6-202ENST00000372216 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
COL4A6-202ENST00000372216 WWC2-AS2Q96NR7 200 aa6.71□□□□□ -1.34
COL4A6-202ENST00000372216 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
COL4A6-202ENST00000372216 FAM168BA1KXE4 195 aa6.7□□□□□ -1.34
COL4A6-202ENST00000372216 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
COL4A6-202ENST00000372216 VPREB1P12018 145 aa6.7□□□□□ -1.34
COL4A6-202ENST00000372216 IGHV3OR16-9A0A0B4J2B5 98 aa6.69□□□□□ -1.34
COL4A6-202ENST00000372216 Q6ZRP5 223 aa6.69□□□□□ -1.34
COL4A6-202ENST00000372216 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
COL4A6-202ENST00000372216 KRTAP10-11P60412 298 aa6.68□□□□□ -1.34
COL4A6-202ENST00000372216 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
COL4A6-202ENST00000372216 GOLGB1Q14789 3259 aaKnown RBP6.68□□□□□ -1.34
COL4A6-202ENST00000372216 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
COL4A6-202ENST00000372216 TLN1Q9Y490 2541 aaKnown RBP6.66□□□□□ -1.34
COL4A6-202ENST00000372216 LINC00846Q9NV44 126 aa6.65□□□□□ -1.34
COL4A6-202ENST00000372216 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.35
COL4A6-202ENST00000372216 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
COL4A6-202ENST00000372216 K7EIL1 84 aa6.64□□□□□ -1.35
COL4A6-202ENST00000372216 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
COL4A6-202ENST00000372216 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
COL4A6-202ENST00000372216 LINC00476Q8WZB0 136 aa6.64□□□□□ -1.35
COL4A6-202ENST00000372216 DSCR10P59022 87 aa6.63□□□□□ -1.35
COL4A6-202ENST00000372216 Q8NBF4 154 aa6.63□□□□□ -1.35
COL4A6-202ENST00000372216 A0A096LNT2 108 aa6.63□□□□□ -1.35
COL4A6-202ENST00000372216 WDR87Q6ZQQ6 2873 aa6.63□□□□□ -1.35
COL4A6-202ENST00000372216 KLK9Q2XQG4 91 aa6.62□□□□□ -1.35
COL4A6-202ENST00000372216 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
COL4A6-202ENST00000372216 OBSCN-AS1Q96MR7 158 aa6.61□□□□□ -1.35
COL4A6-202ENST00000372216 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
COL4A6-202ENST00000372216 GVQW2A0A096LPI5 108 aaPredicted RBP6.61□□□□□ -1.35
COL4A6-202ENST00000372216 LRRK2Q5S007 2527 aa6.6□□□□□ -1.35
COL4A6-202ENST00000372216 ELOF1P60002 83 aaKnown RBP6.6□□□□□ -1.35
COL4A6-202ENST00000372216 PRO0628Q9UI54 55 aa6.6□□□□□ -1.35
COL4A6-202ENST00000372216 CSNK1G2-AS1Q8NCQ2 148 aa6.59□□□□□ -1.35
COL4A6-202ENST00000372216 Q6ZRX8 168 aa6.58□□□□□ -1.36
COL4A6-202ENST00000372216 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
COL4A6-202ENST00000372216 A0A0D9SG42 100 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 ANKRD11Q6UB99 2663 aaPredicted RBP6.57□□□□□ -1.36
COL4A6-202ENST00000372216 ZNF462Q96JM2 2506 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 A0A1W2PNN7 141 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 BCE1O60756 84 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 C4orf26Q17RF5 130 aa6.57□□□□□ -1.36
COL4A6-202ENST00000372216 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
COL4A6-202ENST00000372216 M0R2T5 61 aa6.56□□□□□ -1.36
COL4A6-202ENST00000372216 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
COL4A6-202ENST00000372216 TM2D3Q9BRN9 247 aa6.56□□□□□ -1.36
COL4A6-202ENST00000372216 CXCL6P80162 114 aa6.56□□□□□ -1.36
COL4A6-202ENST00000372216 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
COL4A6-202ENST00000372216 FAM218AQ96MZ4 157 aa6.55□□□□□ -1.36
COL4A6-202ENST00000372216 K7EQZ3 153 aa6.55□□□□□ -1.36
COL4A6-202ENST00000372216 CENPFP49454 3210 aa6.54□□□□□ -1.36
COL4A6-202ENST00000372216 MYO18BQ8IUG5 2567 aa6.53□□□□□ -1.36
COL4A6-202ENST00000372216 JMJD1CQ15652 2540 aa6.53□□□□□ -1.36
COL4A6-202ENST00000372216 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
COL4A6-202ENST00000372216 TP53AIP1Q9HCN2 124 aa6.53□□□□□ -1.36
COL4A6-202ENST00000372216 ABCA12Q86UK0 2595 aa6.53□□□□□ -1.36
COL4A6-202ENST00000372216 ZNF575Q86XF7 245 aa6.52□□□□□ -1.37
COL4A6-202ENST00000372216 CEP295Q9C0D2 2601 aa6.51□□□□□ -1.37
COL4A6-202ENST00000372216 C2CD3Q4AC94 2353 aa6.5□□□□□ -1.37
COL4A6-202ENST00000372216 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
COL4A6-202ENST00000372216 LINC01600Q96MT4 127 aa6.49□□□□□ -1.37
COL4A6-202ENST00000372216 GIG44P09565 113 aaPredicted RBP6.49□□□□□ -1.37
COL4A6-202ENST00000372216 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
COL4A6-202ENST00000372216 C15orf56Q8N910 161 aa6.49□□□□□ -1.37
COL4A6-202ENST00000372216 Q6ZQT0 140 aa6.48□□□□□ -1.37
COL4A6-202ENST00000372216 RBM12B-AS1Q9P1G2 102 aa6.48□□□□□ -1.37
COL4A6-202ENST00000372216 MYO9AB2RTY4 2548 aa6.48□□□□□ -1.37
COL4A6-202ENST00000372216 IGLV1-50A0A075B6I6 118 aa6.47□□□□□ -1.37
COL4A6-202ENST00000372216 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
COL4A6-202ENST00000372216 SPTBN4Q9H254 2564 aa6.46□□□□□ -1.37
COL4A6-202ENST00000372216 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.37
COL4A6-202ENST00000372216 ZFYVE26Q68DK2 2539 aa6.46□□□□□ -1.38
COL4A6-202ENST00000372216 A0A087WTM6 91 aa6.46□□□□□ -1.38
COL4A6-202ENST00000372216 FN1P02751 2386 aaKnown RBP6.46□□□□□ -1.38
COL4A6-202ENST00000372216 A0A1B0GW54 56 aa6.46□□□□□ -1.38
COL4A6-202ENST00000372216 CHD8Q9HCK8 2581 aa6.45□□□□□ -1.38
COL4A6-202ENST00000372216 LINC00528Q8N1L1 170 aa6.45□□□□□ -1.38
COL4A6-202ENST00000372216 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
COL4A6-202ENST00000372216 CRIPTQ9P021 101 aa6.45□□□□□ -1.38
COL4A6-202ENST00000372216 LITAFQ99732 161 aa6.45□□□□□ -1.38
COL4A6-202ENST00000372216 Q8N1X5 172 aa6.45□□□□□ -1.38
COL4A6-202ENST00000372216 TRBV7-4A0A0J9YYF1 115 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms