RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KIAA0087Q14695 138 aa9.34□□□□□ -0.91
RAPGEF1-201ENST00000372189 Q6ZSN1 163 aa9.34□□□□□ -0.91
RAPGEF1-201ENST00000372189 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
RAPGEF1-201ENST00000372189 H3BPC8 53 aa9.33□□□□□ -0.92
RAPGEF1-201ENST00000372189 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
RAPGEF1-201ENST00000372189 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
RAPGEF1-201ENST00000372189 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
RAPGEF1-201ENST00000372189 GOLGB1Q14789 3259 aaKnown RBP9.32□□□□□ -0.92
RAPGEF1-201ENST00000372189 WDR87Q6ZQQ6 2873 aa9.32□□□□□ -0.92
RAPGEF1-201ENST00000372189 CEP295Q9C0D2 2601 aa9.32□□□□□ -0.92
RAPGEF1-201ENST00000372189 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
RAPGEF1-201ENST00000372189 A0A1B0GUV1 79 aa9.31□□□□□ -0.92
RAPGEF1-201ENST00000372189 MYO18BQ8IUG5 2567 aa9.31□□□□□ -0.92
RAPGEF1-201ENST00000372189 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
RAPGEF1-201ENST00000372189 KIF25-AS1Q9Y6Z4 181 aa9.3□□□□□ -0.92
RAPGEF1-201ENST00000372189 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
RAPGEF1-201ENST00000372189 LINC00337Q8N6G1 96 aa9.29□□□□□ -0.92
RAPGEF1-201ENST00000372189 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
RAPGEF1-201ENST00000372189 TET2Q6N021 2002 aaPredicted RBP9.29□□□□□ -0.92
RAPGEF1-201ENST00000372189 SMCPP49901 116 aaPredicted RBP9.29□□□□□ -0.92
RAPGEF1-201ENST00000372189 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
RAPGEF1-201ENST00000372189 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
RAPGEF1-201ENST00000372189 ZNF462Q96JM2 2506 aa9.28□□□□□ -0.92
RAPGEF1-201ENST00000372189 IGLV8-61A0A075B6I0 122 aa9.28□□□□□ -0.92
RAPGEF1-201ENST00000372189 PCSK5Q92824 1860 aa9.27□□□□□ -0.92
RAPGEF1-201ENST00000372189 IGLV5-39A0A0G2JS06 123 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 PRO0461Q9UI25 63 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 CAMK2N1Q7Z7J9 78 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
RAPGEF1-201ENST00000372189 LINC01556Q5JQF7 62 aa9.25□□□□□ -0.93
RAPGEF1-201ENST00000372189 SPTBN4Q9H254 2564 aa9.25□□□□□ -0.93
RAPGEF1-201ENST00000372189 COL27A1Q8IZC6 1860 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF1-201ENST00000372189 A0A1B0GW54 56 aa9.24□□□□□ -0.93
RAPGEF1-201ENST00000372189 TP53AIP1Q9HCN2 124 aa9.23□□□□□ -0.93
RAPGEF1-201ENST00000372189 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
RAPGEF1-201ENST00000372189 LRRK2Q5S007 2527 aa9.22□□□□□ -0.93
RAPGEF1-201ENST00000372189 A0A087WSZ3 146 aa9.22□□□□□ -0.93
RAPGEF1-201ENST00000372189 Q6ZRU5 148 aa9.21□□□□□ -0.93
RAPGEF1-201ENST00000372189 A8MTW9 85 aa9.21□□□□□ -0.93
RAPGEF1-201ENST00000372189 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.93
RAPGEF1-201ENST00000372189 LINC00315P59091 139 aa9.21□□□□□ -0.94
RAPGEF1-201ENST00000372189 COA5Q86WW8 74 aa9.21□□□□□ -0.94
RAPGEF1-201ENST00000372189 ABCA12Q86UK0 2595 aa9.21□□□□□ -0.94
RAPGEF1-201ENST00000372189 CHD8Q9HCK8 2581 aa9.21□□□□□ -0.94
RAPGEF1-201ENST00000372189 MYO9AB2RTY4 2548 aa9.2□□□□□ -0.94
RAPGEF1-201ENST00000372189 DEFB116Q30KQ4 102 aa9.19□□□□□ -0.94
RAPGEF1-201ENST00000372189 H3BNG1 76 aa9.19□□□□□ -0.94
RAPGEF1-201ENST00000372189 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
RAPGEF1-201ENST00000372189 CENPFP49454 3210 aa9.19□□□□□ -0.94
RAPGEF1-201ENST00000372189 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
RAPGEF1-201ENST00000372189 SPATA3Q8NHX4 192 aa9.18□□□□□ -0.94
RAPGEF1-201ENST00000372189 ZFYVE26Q68DK2 2539 aa9.17□□□□□ -0.94
RAPGEF1-201ENST00000372189 IGHV3OR16-9A0A0B4J2B5 98 aa9.16□□□□□ -0.94
RAPGEF1-201ENST00000372189 FAM218AQ96MZ4 157 aa9.15□□□□□ -0.94
RAPGEF1-201ENST00000372189 C8orf17Q9NRJ1 99 aa9.15□□□□□ -0.95
RAPGEF1-201ENST00000372189 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
RAPGEF1-201ENST00000372189 AGRNO00468 2067 aa9.13□□□□□ -0.95
RAPGEF1-201ENST00000372189 Q8NAQ8 132 aa9.13□□□□□ -0.95
RAPGEF1-201ENST00000372189 USP9XQ93008 2570 aaPredicted RBP9.13□□□□□ -0.95
RAPGEF1-201ENST00000372189 A0A096LNT2 108 aa9.12□□□□□ -0.95
RAPGEF1-201ENST00000372189 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
RAPGEF1-201ENST00000372189 KLK9Q2XQG4 91 aa9.11□□□□□ -0.95
RAPGEF1-201ENST00000372189 DMAC1Q96GE9 116 aa9.11□□□□□ -0.95
RAPGEF1-201ENST00000372189 LOC110117498A0A087WWA1 95 aa9.1□□□□□ -0.95
RAPGEF1-201ENST00000372189 TLN2Q9Y4G6 2542 aa9.1□□□□□ -0.95
RAPGEF1-201ENST00000372189 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
RAPGEF1-201ENST00000372189 NBDYA0A0U1RRE5 68 aa9.1□□□□□ -0.95
RAPGEF1-201ENST00000372189 Q6ZQT0 140 aa9.1□□□□□ -0.95
RAPGEF1-201ENST00000372189 APLNQ9ULZ1 77 aa9.09□□□□□ -0.95
RAPGEF1-201ENST00000372189 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
RAPGEF1-201ENST00000372189 IGKV2D-30A0A075B6S6 120 aa9.09□□□□□ -0.95
RAPGEF1-201ENST00000372189 IGKV2-30P06310 120 aa9.09□□□□□ -0.95
RAPGEF1-201ENST00000372189 FN1P02751 2386 aaKnown RBP9.08□□□□□ -0.96
RAPGEF1-201ENST00000372189 C2CD3Q4AC94 2353 aa9.08□□□□□ -0.96
RAPGEF1-201ENST00000372189 PKD1L2Q7Z442 2459 aa9.08□□□□□ -0.96
RAPGEF1-201ENST00000372189 KLKP1Q107X0 134 aa9.07□□□□□ -0.96
RAPGEF1-201ENST00000372189 IGLV7-43P04211 117 aa9.07□□□□□ -0.96
RAPGEF1-201ENST00000372189 Q1T7F1 81 aa9.07□□□□□ -0.96
RAPGEF1-201ENST00000372189 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
RAPGEF1-201ENST00000372189 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
RAPGEF1-201ENST00000372189 KRTAP10-11P60412 298 aa9.06□□□□□ -0.96
RAPGEF1-201ENST00000372189 RTL8CO15255 209 aa9.05□□□□□ -0.96
RAPGEF1-201ENST00000372189 DOPEY1Q5JWR5 2465 aa9.05□□□□□ -0.96
RAPGEF1-201ENST00000372189 ANKRD17O75179 2603 aaKnown RBP9.04□□□□□ -0.96
RAPGEF1-201ENST00000372189 K7EIL1 84 aa9.04□□□□□ -0.96
RAPGEF1-201ENST00000372189 USP9YO00507 2555 aaPredicted RBP9.03□□□□□ -0.96
RAPGEF1-201ENST00000372189 C16orf90A8MZG2 172 aa9.02□□□□□ -0.96
RAPGEF1-201ENST00000372189 LITAFQ99732 161 aa9.02□□□□□ -0.97
RAPGEF1-201ENST00000372189 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
RAPGEF1-201ENST00000372189 FASNP49327 2511 aaKnown RBP9.02□□□□□ -0.97
RAPGEF1-201ENST00000372189 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
RAPGEF1-201ENST00000372189 LINC00167Q96N53 147 aa9.01□□□□□ -0.97
RAPGEF1-201ENST00000372189 H7BZZ5 65 aa9□□□□□ -0.97
RAPGEF1-201ENST00000372189 KRTAP1-3Q8IUG1 177 aa9□□□□□ -0.97
RAPGEF1-201ENST00000372189 Q8NBF4 154 aa8.99□□□□□ -0.97
RAPGEF1-201ENST00000372189 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
RAPGEF1-201ENST00000372189 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms