RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LITAFQ99732 161 aa5.83□□□□□ -1.48
TPM3-213ENST00000368545 TSPAN13O95857 204 aa5.82□□□□□ -1.48
TPM3-213ENST00000368545 IFITM1P13164 125 aa5.82□□□□□ -1.48
TPM3-213ENST00000368545 KRTAP19-1Q8IUB9 90 aa5.82□□□□□ -1.48
TPM3-213ENST00000368545 SMIM13P0DJ93 91 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 MEIG1Q5JSS6 88 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 ADAMTSL4-AS1Q5T5F5 129 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 KRTAP4-5Q9BYR2 181 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 PPDPFQ9H3Y8 114 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 NHP2Q9NX24 153 aaKnown RBP5.81□□□□□ -1.48
TPM3-213ENST00000368545 A0A1B0GWB2 263 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 APLNQ9ULZ1 77 aa5.81□□□□□ -1.48
TPM3-213ENST00000368545 RYR1P21817 5038 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 IBA57-AS1B1ANH7 110 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 CKS1BP61024 79 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.8□□□□□ -1.48
TPM3-213ENST00000368545 INAFM2P0DMQ5 153 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 NDUFV3P56181 108 aaKnown RBP5.8□□□□□ -1.48
TPM3-213ENST00000368545 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
TPM3-213ENST00000368545 SPAG11BQ08648 103 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 OCIAD2Q56VL3 154 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 MUSTN1Q8IVN3 82 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 UBE2DNLQ8IWF7 75 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 MTURNQ8N3F0 131 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 RMI2Q96E14 147 aa5.79□□□□□ -1.48
TPM3-213ENST00000368545 KIAA0087Q14695 138 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 KRTAP26-1Q6PEX3 210 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 IGKV2D-24A0A075B6R9 120 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 A0A0B4J2C4 111 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 K7ERJ3 54 aa5.78□□□□□ -1.48
TPM3-213ENST00000368545 COX17Q14061 63 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 LINC00308Q8TCZ7 52 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 RAB37Q96AX2 223 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 ERG28Q9UKR5 140 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 IGKV2-30P06310 120 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 CFC1BP0CG36 223 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 CFC1P0CG37 223 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 LINC00158P58513 81 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 SS18L2Q9UHA2 77 aa5.77□□□□□ -1.49
TPM3-213ENST00000368545 C2orf82Q6UX34 121 aa5.76□□□□□ -1.49
TPM3-213ENST00000368545 DAND5Q8N907 189 aa5.76□□□□□ -1.49
TPM3-213ENST00000368545 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
TPM3-213ENST00000368545 EPM2AB3EWF7 344 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 NPC2P61916 151 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 MIR7-3HGQ8N6C7 128 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
TPM3-213ENST00000368545 H3BUT2 72 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 PFN2P35080 140 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 CSMD3Q7Z407 3707 aa5.75□□□□□ -1.49
TPM3-213ENST00000368545 A0A1W2PPM0 123 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
TPM3-213ENST00000368545 A0A087X002 238 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 TRBV30A0A0K0K1B3 111 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 VAMP3Q15836 100 aa5.74□□□□□ -1.49
TPM3-213ENST00000368545 C16orf90A8MZG2 172 aa5.73□□□□□ -1.49
TPM3-213ENST00000368545 FABP2P12104 132 aa5.73□□□□□ -1.49
TPM3-213ENST00000368545 SOSTDC1Q6X4U4 206 aa5.73□□□□□ -1.49
TPM3-213ENST00000368545 OCR1Q9BZK8 76 aa5.73□□□□□ -1.49
TPM3-213ENST00000368545 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 C6orf223Q8N319 242 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 CAMK2N2Q96S95 79 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 STARD9Q9P2P6 4700 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 LOC107984156A0A0G2JMH3 177 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 RPL37AP8A6NKH3 93 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 HIGD2BQ4VC39 106 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 GTF2H5Q6ZYL4 71 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 ARL17AQ8IVW1 177 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 SND1-IT1Q9HBX3 110 aa5.72□□□□□ -1.49
TPM3-213ENST00000368545 NAA38Q9BRA0 125 aaKnown RBP5.71□□□□□ -1.5
TPM3-213ENST00000368545 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
TPM3-213ENST00000368545 LINC00526Q96FQ7 95 aa5.71□□□□□ -1.5
TPM3-213ENST00000368545 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
TPM3-213ENST00000368545 K7ERU9 68 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 RTL8CO15255 209 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 Q1RN00 199 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 NOTCH2NLQ7Z3S9 236 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 KRTAP1-5Q9BYS1 174 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 C6orf48Q9UBA6 75 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 SPCS1Q9Y6A9 102 aa5.7□□□□□ -1.5
TPM3-213ENST00000368545 NBDYA0A0U1RRE5 68 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 K7EP34 96 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 NDUFC2O95298 119 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 C9orf116Q5BN46 136 aaPredicted RBP5.69□□□□□ -1.5
TPM3-213ENST00000368545 DNAH10Q8IVF4 4471 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 PSCAO43653 123 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 SYCNQ0VAF6 134 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 Q6ZRU5 148 aa5.69□□□□□ -1.5
TPM3-213ENST00000368545 PSMB2P49721 201 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 277 ms