RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 TRAV21A0A0B4J279 112 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 A0A1B0GW15 77 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 C19orf71A6NCJ1 209 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 A8MWV9 139 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 PEX7O00628 323 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 OR7C2O60412 319 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 HSBP1O75506 76 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 PDE6HQ13956 83 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 C9orf116Q5BN46 136 aaPredicted RBP3.97□□□□□ -1.77
H3F3A-201ENST00000366813 PTH2Q96A98 100 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 FXYD5Q96DB9 178 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
H3F3A-201ENST00000366813 RNASE7Q9H1E1 156 aaKnown RBP3.97□□□□□ -1.77
H3F3A-201ENST00000366813 TRAV8-4A0A0B4J246 113 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 A8MWL6 223 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 LTAP01374 205 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 P01737 135 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 RNASE3P12724 160 aaKnown RBP3.96□□□□□ -1.77
H3F3A-201ENST00000366813 HBBP68871 147 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 MRPL54Q6P161 138 aaKnown RBP3.96□□□□□ -1.77
H3F3A-201ENST00000366813 TMEM14CQ9P0S9 112 aa3.96□□□□□ -1.77
H3F3A-201ENST00000366813 TRBV7-3A0A075B6L6 115 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 RBAKDNA6NC62 111 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 HIGD1CA8MV81 97 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 SYS1-DBNDD2H3BUS1 97 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 TAX1BP3O14907 124 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 SEC11AP67812 179 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
H3F3A-201ENST00000366813 COTL1Q14019 142 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 BVES-AS1Q5T3Y7 98 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 FAM74A4Q5TZK3 123 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 LINC01545Q5VT33 79 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 NTM-AS1Q6ZSK4 140 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 FAM19A2Q8N3H0 131 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 C5orf17Q8NAS9 161 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 FMC1Q96HJ9 113 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 TMEM191AQ9H0A3 160 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 EPDR1Q9UM22 224 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 LENEPQ9Y5L5 61 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 GVQW2A0A096LPI5 108 aaPredicted RBP3.95□□□□□ -1.78
H3F3A-201ENST00000366813 COX8AP10176 69 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 BATFQ16520 125 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 HSPB8Q9UJY1 196 aa3.95□□□□□ -1.78
H3F3A-201ENST00000366813 IGLV4-60A0A075B6I1 120 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 IGHV1-24A0A0C4DH33 117 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 LEPROTL1O95214 131 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 TCRAP04437 139 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 NBEAP1P0C6P0 100 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 NTF3P20783 257 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 CSN1S1P47710 185 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 HINT1P49773 126 aaPredicted RBP3.94□□□□□ -1.78
H3F3A-201ENST00000366813 ZNF80P51504 273 aaPredicted RBP3.94□□□□□ -1.78
H3F3A-201ENST00000366813 CARD19Q96LW7 228 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 OTORQ9NRC9 128 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 PHLDA3Q9Y5J5 127 aa3.94□□□□□ -1.78
H3F3A-201ENST00000366813 TRBV10-1A0A0K0K1A3 114 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 LINC01546A6NGU7 62 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 HSBP1L1C9JCN9 74 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 FGF6P10767 208 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 SS18Q15532 418 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 OCIAD2Q56VL3 154 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 RNASEKQ6P5S7 137 aaKnown RBP3.93□□□□□ -1.78
H3F3A-201ENST00000366813 SMIM15Q7Z3B0 74 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 Q8N9L7 120 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 OR10AG1Q8NH19 301 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 MAP1LC3CQ9BXW4 147 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 CST9LQ9H4G1 147 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 PKIGQ9Y2B9 76 aa3.93□□□□□ -1.78
H3F3A-201ENST00000366813 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
H3F3A-201ENST00000366813 SERTM2A0A1B0GWG4 89 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 H3BRM9 83 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 K7ERU9 68 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 SMIM17P0DL12 118 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 KIAA0087Q14695 138 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 C2orf91Q6ZV80 131 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 Q86TA4 180 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 BOD1L2Q8IYS8 172 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 LINC00304Q8N9R0 145 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 FAM104AQ969W3 186 aa3.92□□□□□ -1.78
H3F3A-201ENST00000366813 IGKV3OR2-268A0A0C4DH90 116 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 LOC107984640A0A0U1RRK4 108 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 A0A1B0GUT8 65 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 SEC61GP60059 68 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 VAMP3Q15836 100 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 HIGD1BQ9P298 99 aa3.91□□□□□ -1.78
H3F3A-201ENST00000366813 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 A0A096LNJ9 63 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 MUC21A0A140T8X8 626 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 A6NDN8 102 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 S100A4P26447 101 aaKnown RBP3.9□□□□□ -1.79
H3F3A-201ENST00000366813 HSD52Q0P140 79 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 SYCNQ0VAF6 134 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 KRTAP13-2Q52LG2 175 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 TMEM97Q5BJF2 176 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 GTF2H5Q6ZYL4 71 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 ATOH7Q8N100 152 aa3.9□□□□□ -1.79
H3F3A-201ENST00000366813 OR5A1Q8NGJ0 315 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms