RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NDUFC1O43677 76 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 NDUFA3O95167 84 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 RBP4P02753 201 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 C3orf79P0CE67 100 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 TRGV9Q99603 122 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 PSENENQ9NZ42 101 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 NLRP1Q9C000 1473 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 CROCC2H7BZ55 1655 aa-1.64□□□□□ -2.67
RNU4-28P-201ENST00000364739 J3QLW9 94 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 IAPPP10997 89 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 CD52P31358 61 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 LINC00158P58513 81 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 SERP2Q8N6R1 65 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 PLIN4Q96Q06 1357 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 SHANK2Q9UPX8 1470 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 KIF1AQ12756 1690 aa-1.65□□□□□ -2.67
RNU4-28P-201ENST00000364739 CRYBG1Q9Y4K1 1723 aa-1.66□□□□□ -2.67
RNU4-28P-201ENST00000364739 TRBV7-3A0A075B6L6 115 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 HMGA1P17096 107 aaKnown RBP-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 SNCAP37840 140 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 TMEM244Q5VVB8 128 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 TOMM20LQ6UXN7 152 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 C10orf82Q8WW14 230 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 SNRNP25Q9BV90 132 aaKnown RBP-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 COPZ2Q9P299 210 aa-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 CPSF1Q10570 1443 aaKnown RBP-1.66□□□□□ -2.68
RNU4-28P-201ENST00000364739 QRICH2Q9H0J4 1663 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 CD163L1Q9NR16 1453 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 ANKRD36A6QL64 1941 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 SMIM24O75264 130 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 PIRTP0C851 137 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 SEC11AP67812 179 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 MRPS10P82664 201 aaKnown RBP-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 COMMD6Q7Z4G1 85 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 MMGT1Q8N4V1 131 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 PARP4Q9UKK3 1724 aaKnown RBP-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 CLASP1Q7Z460 1538 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 PLCH1Q4KWH8 1693 aa-1.67□□□□□ -2.68
RNU4-28P-201ENST00000364739 MYH6P13533 1939 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 A0A0G2JND7 137 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 CCDC179H3BU77 68 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 APOC3P02656 99 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 IFI6P09912 130 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 COX7BP24311 80 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 C10orf113Q5VZT2 155 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 MGST2Q99735 147 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 LSM2Q9Y333 95 aaKnown RBP-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 R4GMQ9 66 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 ZFYVE16Q7Z3T8 1539 aa-1.68□□□□□ -2.68
RNU4-28P-201ENST00000364739 SPHKAPQ2M3C7 1700 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 ARHGAP35Q9NRY4 1499 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 IBTKQ9P2D0 1353 aaPredicted RBP-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 MAPKBP1O60336 1514 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 TET3O43151 1660 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 ROBO1Q9Y6N7 1651 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 A0A1B0GV72 72 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 A0A1B0GX51 115 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 H3BUA1 57 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 CCL18P55774 89 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 WT1-ASQ06250 92 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 Q6AWC8 147 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 C6orf201Q7Z4U5 140 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 MYOZ3Q8TDC0 251 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 TMEM263Q8WUH6 116 aaKnown RBP-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 DOT1LQ8TEK3 1739 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 C1orf167Q5SNV9 1468 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 TEX14Q8IWB6 1497 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 DEPDC5O75140 1603 aa-1.69□□□□□ -2.68
RNU4-28P-201ENST00000364739 RGPD2P0DJD1 1756 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 A0A1B0GU69 56 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 CLPSL1A2RUU4 121 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 CBLN1P23435 193 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 TPPP2P59282 170 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 DEFB133Q30KQ1 61 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 EDC4Q6P2E9 1401 aaKnown RBP-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 FAM167A-AS1Q96KT0 104 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 ERCC6Q03468 1493 aa-1.7□□□□□ -2.68
RNU4-28P-201ENST00000364739 UQCR11O14957 56 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 S100GP29377 79 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 UBA52P62987 128 aaKnown RBP-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 BVES-AS1Q5T3Y7 98 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 BAGE2Q86Y30 109 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 PRO1933Q9H354 126 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 SPEF2Q9C093 1822 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 CUL7Q14999 1698 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 PREX1Q8TCU6 1659 aa-1.71□□□□□ -2.68
RNU4-28P-201ENST00000364739 ABCC5O15440 1437 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 RAPGEF6Q8TEU7 1601 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 TRBV7-7A0A0K0K1E9 115 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 LOC100130705A0A1B0GUX0 176 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 HIST1H1DP16402 221 aaKnown RBP-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 LINC01545Q5VT33 79 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 SERP1Q9Y6X1 66 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 V9GYH0 126 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 V9GYQ6 96 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 MED14O60244 1454 aa-1.72□□□□□ -2.68
RNU4-28P-201ENST00000364739 SUPT6HQ7KZ85 1726 aaKnown RBP-1.72□□□□□ -2.69
RNU4-28P-201ENST00000364739 KIAA1551Q9HCM1 1747 aa-1.72□□□□□ -2.69
RNU4-28P-201ENST00000364739 TMEM2Q9UHN6 1383 aa-1.72□□□□□ -2.69
RNU4-28P-201ENST00000364739 LRRC37A3O60309 1634 aa-1.73□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms