RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 DNAH6Q9C0G6 4158 aa-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 DNAH3Q8TD57 4116 aa-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 hADV29S1A0JD25 119 aa-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 H3BQ15 152 aa-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 SLIT1O75093 1534 aa-1.32□□□□□ -2.62
RNU6-560P-201ENST00000364007 C5P01031 1676 aa-1.33□□□□□ -2.62
RNU6-560P-201ENST00000364007 KNL1Q8NG31 2342 aa-1.33□□□□□ -2.62
RNU6-560P-201ENST00000364007 C7orf77A4D0Y5 90 aa-1.34□□□□□ -2.62
RNU6-560P-201ENST00000364007 KRTDAPP60985 99 aa-1.34□□□□□ -2.62
RNU6-560P-201ENST00000364007 GNG8Q9UK08 70 aa-1.34□□□□□ -2.62
RNU6-560P-201ENST00000364007 NIPBLQ6KC79 2804 aaeCLIP-1.34□□□□□ -2.62
RNU6-560P-201ENST00000364007 I3L3M4 83 aa-1.35□□□□□ -2.63
RNU6-560P-201ENST00000364007 ASIPP42127 132 aa-1.35□□□□□ -2.63
RNU6-560P-201ENST00000364007 DEFB107AQ8IZN7 70 aa-1.35□□□□□ -2.63
RNU6-560P-201ENST00000364007 CGREF1Q99674 301 aa-1.35□□□□□ -2.63
RNU6-560P-201ENST00000364007 PRRC2CQ9Y520 2896 aaKnown RBP-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 BCORQ6W2J9 1755 aa-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 FASNP49327 2511 aaKnown RBP-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 TMEM262E9PQX1 116 aa-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 SPRR2EP22531 72 aa-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 DSPP15924 2871 aaKnown RBP-1.36□□□□□ -2.63
RNU6-560P-201ENST00000364007 PKHD1L1Q86WI1 4243 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 ABCC5O15440 1437 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 H3BQF6 201 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 C2orf88Q9BSF0 95 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 VAMP8Q9BV40 100 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 CUX1P39880 1505 aa-1.37□□□□□ -2.63
RNU6-560P-201ENST00000364007 TNRC18O15417 2968 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-560P-201ENST00000364007 DNAH2Q9P225 4427 aa-1.38□□□□□ -2.63
RNU6-560P-201ENST00000364007 REV3LO60673 3130 aa-1.38□□□□□ -2.63
RNU6-560P-201ENST00000364007 A0A0G2JND7 137 aa-1.38□□□□□ -2.63
RNU6-560P-201ENST00000364007 LINC00587B1AMM8 73 aa-1.39□□□□□ -2.63
RNU6-560P-201ENST00000364007 H0Y9P7 68 aa-1.39□□□□□ -2.63
RNU6-560P-201ENST00000364007 GTF2H5Q6ZYL4 71 aa-1.39□□□□□ -2.63
RNU6-560P-201ENST00000364007 SPTBN4Q9H254 2564 aa-1.39□□□□□ -2.63
RNU6-560P-201ENST00000364007 MYO18BQ8IUG5 2567 aa-1.4□□□□□ -2.63
RNU6-560P-201ENST00000364007 DEFB112Q30KQ8 113 aa-1.4□□□□□ -2.63
RNU6-560P-201ENST00000364007 TMEM203Q969S6 136 aa-1.4□□□□□ -2.63
RNU6-560P-201ENST00000364007 COL12A1Q99715 3063 aa-1.4□□□□□ -2.63
RNU6-560P-201ENST00000364007 PLECQ15149 4684 aaKnown RBP-1.4□□□□□ -2.63
RNU6-560P-201ENST00000364007 C9orf62Q8N4C0 152 aa-1.41□□□□□ -2.64
RNU6-560P-201ENST00000364007 CACFD1Q9UGQ2 172 aa-1.41□□□□□ -2.64
RNU6-560P-201ENST00000364007 PKD1P98161 4303 aa-1.41□□□□□ -2.64
RNU6-560P-201ENST00000364007 GNGT1P63211 74 aa-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 MRPS10P82664 201 aaKnown RBP-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 PSMG4Q5JS54 123 aa-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 MRPL34Q9BQ48 92 aaKnown RBP-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 FAM135AQ9P2D6 1515 aa-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 MYH4Q9Y623 1939 aa-1.42□□□□□ -2.64
RNU6-560P-201ENST00000364007 LELP1Q5T871 98 aa-1.43□□□□□ -2.64
RNU6-560P-201ENST00000364007 WDR87Q6ZQQ6 2873 aa-1.43□□□□□ -2.64
RNU6-560P-201ENST00000364007 CELSR3Q9NYQ7 3312 aa-1.43□□□□□ -2.64
RNU6-560P-201ENST00000364007 MLH3Q9UHC1 1453 aa-1.43□□□□□ -2.64
RNU6-560P-201ENST00000364007 VPS13DQ5THJ4 4388 aa-1.44□□□□□ -2.64
RNU6-560P-201ENST00000364007 FAT3Q8TDW7 4589 aa-1.44□□□□□ -2.64
RNU6-560P-201ENST00000364007 CRYBG1Q9Y4K1 1723 aa-1.44□□□□□ -2.64
RNU6-560P-201ENST00000364007 USP9XQ93008 2570 aaPredicted RBP-1.45□□□□□ -2.64
RNU6-560P-201ENST00000364007 ZFYVE16Q7Z3T8 1539 aa-1.45□□□□□ -2.64
RNU6-560P-201ENST00000364007 PKD1L3Q7Z443 1732 aa-1.45□□□□□ -2.64
RNU6-560P-201ENST00000364007 NCOA3Q9Y6Q9 1424 aa-1.45□□□□□ -2.64
RNU6-560P-201ENST00000364007 TRBV25-1A0A075B6N4 114 aa-1.45□□□□□ -2.64
RNU6-560P-201ENST00000364007 PMCHL1Q16048 86 aa-1.46□□□□□ -2.64
RNU6-560P-201ENST00000364007 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.46□□□□□ -2.64
RNU6-560P-201ENST00000364007 ADAMTS12P58397 1594 aa-1.47□□□□□ -2.64
RNU6-560P-201ENST00000364007 PTPN23Q9H3S7 1636 aa-1.47□□□□□ -2.64
RNU6-560P-201ENST00000364007 GNGT2O14610 69 aa-1.47□□□□□ -2.64
RNU6-560P-201ENST00000364007 ARMS2P0C7Q2 107 aa-1.47□□□□□ -2.64
RNU6-560P-201ENST00000364007 QSER1Q2KHR3 1735 aa-1.47□□□□□ -2.64
RNU6-560P-201ENST00000364007 SPG11Q96JI7 2443 aa-1.47□□□□□ -2.65
RNU6-560P-201ENST00000364007 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.47□□□□□ -2.65
RNU6-560P-201ENST00000364007 HEPN1Q6WQI6 88 aa-1.48□□□□□ -2.65
RNU6-560P-201ENST00000364007 AKAP13Q12802 2813 aa-1.48□□□□□ -2.65
RNU6-560P-201ENST00000364007 PRDM15P57071 1507 aaPredicted RBP-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 ANK3Q12955 4377 aaKnown RBP-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 H7BZZ5 65 aa-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 NDUFC1O43677 76 aa-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 TACC2O95359 2948 aa-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 LAMA3Q16787 3333 aa-1.49□□□□□ -2.65
RNU6-560P-201ENST00000364007 UBR3Q6ZT12 1888 aa-1.5□□□□□ -2.65
RNU6-560P-201ENST00000364007 SAMD9Q5K651 1589 aa-1.5□□□□□ -2.65
RNU6-560P-201ENST00000364007 CCL22O00626 93 aa-1.5□□□□□ -2.65
RNU6-560P-201ENST00000364007 LYSTQ99698 3801 aa-1.5□□□□□ -2.65
RNU6-560P-201ENST00000364007 TRAV30A0A087WSZ9 112 aa-1.51□□□□□ -2.65
RNU6-560P-201ENST00000364007 SPTY2D1-AS1A0A0U1RR47 76 aa-1.51□□□□□ -2.65
RNU6-560P-201ENST00000364007 C20orf202A1L168 122 aa-1.51□□□□□ -2.65
RNU6-560P-201ENST00000364007 UQCRHP07919 91 aa-1.51□□□□□ -2.65
RNU6-560P-201ENST00000364007 TRGV9Q99603 122 aa-1.51□□□□□ -2.65
RNU6-560P-201ENST00000364007 TRBV7-7A0A0K0K1E9 115 aa-1.52□□□□□ -2.65
RNU6-560P-201ENST00000364007 SARNPP82979 210 aaKnown RBP-1.52□□□□□ -2.65
RNU6-560P-201ENST00000364007 NRXN1Q9ULB1 1477 aa-1.52□□□□□ -2.65
RNU6-560P-201ENST00000364007 PDE4DIPQ5VU43 2346 aa-1.52□□□□□ -2.65
RNU6-560P-201ENST00000364007 RAPGEF2Q9Y4G8 1499 aa-1.53□□□□□ -2.65
RNU6-560P-201ENST00000364007 CLTCQ00610 1675 aaKnown RBP-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 ABCC2Q92887 1545 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 TRANK1O15050 2925 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 WFDC13Q8IUB5 93 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 PMCHL2Q9BQD1 86 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 CDKN2A-AS1Q9UH64 79 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 LAMA1P25391 3075 aa-1.54□□□□□ -2.66
RNU6-560P-201ENST00000364007 TEX15Q9BXT5 2789 aa-1.54□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms