RNA–Protein interactions for RNA: ENST00000363016.1

RNU6-249P-201, Transcript of RNA, U6 small nuclear 249, pseudogene, humanhuman

BASIC

Gene RNU6-249P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-249P-201ENST00000363016 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
RNU6-249P-201ENST00000363016 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
RNU6-249P-201ENST00000363016 TP53AIP1Q9HCN2 124 aa2.92□□□□□ -1.94
RNU6-249P-201ENST00000363016 BRWD1Q9NSI6 2320 aa2.91□□□□□ -1.94
RNU6-249P-201ENST00000363016 IGKV2-28A0A075B6P5 120 aa2.91□□□□□ -1.94
RNU6-249P-201ENST00000363016 GAS8-AS1O95177 125 aa2.91□□□□□ -1.94
RNU6-249P-201ENST00000363016 IGKV2D-28P01615 120 aa2.91□□□□□ -1.94
RNU6-249P-201ENST00000363016 POLR2KP53803 58 aaKnown RBP2.91□□□□□ -1.94
RNU6-249P-201ENST00000363016 G3V318 75 aa2.9□□□□□ -1.95
RNU6-249P-201ENST00000363016 MED13LQ71F56 2210 aa2.9□□□□□ -1.95
RNU6-249P-201ENST00000363016 C10orf99Q6UWK7 81 aa2.89□□□□□ -1.95
RNU6-249P-201ENST00000363016 GVQW2A0A096LPI5 108 aaPredicted RBP2.88□□□□□ -1.95
RNU6-249P-201ENST00000363016 PRCDQ00LT1 54 aa2.88□□□□□ -1.95
RNU6-249P-201ENST00000363016 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
RNU6-249P-201ENST00000363016 MAPK1IP1LQ8NDC0 245 aa2.88□□□□□ -1.95
RNU6-249P-201ENST00000363016 BPTFQ12830 3046 aa2.88□□□□□ -1.95
RNU6-249P-201ENST00000363016 LYNX1G3V0Z9 82 aa2.87□□□□□ -1.95
RNU6-249P-201ENST00000363016 RPS27P42677 84 aaKnown RBP2.87□□□□□ -1.95
RNU6-249P-201ENST00000363016 RPL39P62891 51 aaKnown RBP2.87□□□□□ -1.95
RNU6-249P-201ENST00000363016 SPINK9Q5DT21 86 aa2.87□□□□□ -1.95
RNU6-249P-201ENST00000363016 CRIPTQ9P021 101 aa2.87□□□□□ -1.95
RNU6-249P-201ENST00000363016 PIGYQ3MUY2 71 aa2.86□□□□□ -1.95
RNU6-249P-201ENST00000363016 MINOS1Q5TGZ0 78 aa2.86□□□□□ -1.95
RNU6-249P-201ENST00000363016 KRTAP7-1Q8IUC3 87 aa2.86□□□□□ -1.95
RNU6-249P-201ENST00000363016 CACNA1CQ13936 2221 aa2.85□□□□□ -1.95
RNU6-249P-201ENST00000363016 ZNF318Q5VUA4 2279 aa2.85□□□□□ -1.95
RNU6-249P-201ENST00000363016 RPL39LQ96EH5 51 aaKnown RBP2.85□□□□□ -1.95
RNU6-249P-201ENST00000363016 PRO3102Q9H379 93 aa2.85□□□□□ -1.95
RNU6-249P-201ENST00000363016 F5P12259 2224 aa2.84□□□□□ -1.95
RNU6-249P-201ENST00000363016 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
RNU6-249P-201ENST00000363016 A0A096LNT2 108 aa2.83□□□□□ -1.96
RNU6-249P-201ENST00000363016 IGKV2-24A0A0C4DH68 120 aa2.83□□□□□ -1.96
RNU6-249P-201ENST00000363016 CCL22O00626 93 aa2.83□□□□□ -1.96
RNU6-249P-201ENST00000363016 SPINK13Q1W4C9 94 aa2.83□□□□□ -1.96
RNU6-249P-201ENST00000363016 C6orf48Q9UBA6 75 aa2.83□□□□□ -1.96
RNU6-249P-201ENST00000363016 K7EQZ3 153 aa2.82□□□□□ -1.96
RNU6-249P-201ENST00000363016 COX6B2Q6YFQ2 88 aa2.82□□□□□ -1.96
RNU6-249P-201ENST00000363016 KRTAP29-1A8MX34 341 aaPredicted RBP2.81□□□□□ -1.96
RNU6-249P-201ENST00000363016 DSCR10P59022 87 aa2.81□□□□□ -1.96
RNU6-249P-201ENST00000363016 USMG5Q96IX5 58 aa2.81□□□□□ -1.96
RNU6-249P-201ENST00000363016 UBE2DNLQ8IWF7 75 aa2.8□□□□□ -1.96
RNU6-249P-201ENST00000363016 SHANK1Q9Y566 2161 aa2.79□□□□□ -1.96
RNU6-249P-201ENST00000363016 PCOTHQ58A44 107 aa2.79□□□□□ -1.96
RNU6-249P-201ENST00000363016 Q6ZRN7 208 aaPredicted RBP2.79□□□□□ -1.96
RNU6-249P-201ENST00000363016 PRR9Q5T870 116 aa2.78□□□□□ -1.96
RNU6-249P-201ENST00000363016 DEFB106AQ8N104 65 aa2.78□□□□□ -1.96
RNU6-249P-201ENST00000363016 ANKRD17O75179 2603 aaKnown RBP2.77□□□□□ -1.97
RNU6-249P-201ENST00000363016 IGLV5-48A0A075B6I7 105 aa2.77□□□□□ -1.97
RNU6-249P-201ENST00000363016 WFDC10BQ8IUB3 73 aa2.77□□□□□ -1.97
RNU6-249P-201ENST00000363016 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
RNU6-249P-201ENST00000363016 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
RNU6-249P-201ENST00000363016 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
RNU6-249P-201ENST00000363016 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
RNU6-249P-201ENST00000363016 I3L2K1 104 aa2.75□□□□□ -1.97
RNU6-249P-201ENST00000363016 LEAP2Q969E1 77 aa2.75□□□□□ -1.97
RNU6-249P-201ENST00000363016 TECTAO75443 2155 aa2.75□□□□□ -1.97
RNU6-249P-201ENST00000363016 URB1O60287 2271 aaKnown RBP2.73□□□□□ -1.97
RNU6-249P-201ENST00000363016 M0QY20 66 aa2.73□□□□□ -1.97
RNU6-249P-201ENST00000363016 IGFL1Q6UW32 110 aa2.73□□□□□ -1.97
RNU6-249P-201ENST00000363016 CADP27708 2225 aa2.73□□□□□ -1.97
RNU6-249P-201ENST00000363016 RPL37P61927 97 aaKnown RBP2.72□□□□□ -1.97
RNU6-249P-201ENST00000363016 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
RNU6-249P-201ENST00000363016 SORL1Q92673 2214 aa2.71□□□□□ -1.98
RNU6-249P-201ENST00000363016 DEFB131AP59861 70 aa2.71□□□□□ -1.98
RNU6-249P-201ENST00000363016 PDE4DIPQ5VU43 2346 aa2.7□□□□□ -1.98
RNU6-249P-201ENST00000363016 H0YAA0 97 aa2.7□□□□□ -1.98
RNU6-249P-201ENST00000363016 TMEM167AQ8TBQ9 72 aa2.7□□□□□ -1.98
RNU6-249P-201ENST00000363016 KNTC1P50748 2209 aa2.69□□□□□ -1.98
RNU6-249P-201ENST00000363016 ABCA1O95477 2261 aa2.69□□□□□ -1.98
RNU6-249P-201ENST00000363016 KAAG1Q9UBP8 84 aa2.67□□□□□ -1.98
RNU6-249P-201ENST00000363016 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
RNU6-249P-201ENST00000363016 COX6A2Q02221 97 aa2.66□□□□□ -1.98
RNU6-249P-201ENST00000363016 DEFB123Q8N688 67 aa2.66□□□□□ -1.98
RNU6-249P-201ENST00000363016 FN1P02751 2386 aaKnown RBP2.66□□□□□ -1.98
RNU6-249P-201ENST00000363016 LYNX1P0DP58 116 aa2.65□□□□□ -1.99
RNU6-249P-201ENST00000363016 XP32Q5T750 250 aa2.65□□□□□ -1.99
RNU6-249P-201ENST00000363016 UNQ6190/PRO20217Q6UXQ8 127 aa2.65□□□□□ -1.99
RNU6-249P-201ENST00000363016 TOMM7Q9P0U1 55 aa2.65□□□□□ -1.99
RNU6-249P-201ENST00000363016 PTPRQQ9UMZ3 2332 aa2.65□□□□□ -1.99
RNU6-249P-201ENST00000363016 WT1-ASQ06250 92 aa2.64□□□□□ -1.99
RNU6-249P-201ENST00000363016 CNOT1A5YKK6 2376 aaKnown RBP2.63□□□□□ -1.99
RNU6-249P-201ENST00000363016 H1FX-AS1Q4G0G2 97 aa2.63□□□□□ -1.99
RNU6-249P-201ENST00000363016 Q6ZSA8 131 aa2.63□□□□□ -1.99
RNU6-249P-201ENST00000363016 GPR179Q6PRD1 2367 aa2.63□□□□□ -1.99
RNU6-249P-201ENST00000363016 CACNA1EQ15878 2313 aa2.62□□□□□ -1.99
RNU6-249P-201ENST00000363016 MMP24-AS1A0A0U1RRL7 71 aa2.62□□□□□ -1.99
RNU6-249P-201ENST00000363016 K7EIM0 57 aa2.62□□□□□ -1.99
RNU6-249P-201ENST00000363016 ASXL3Q9C0F0 2248 aa2.62□□□□□ -1.99
RNU6-249P-201ENST00000363016 ALMS1Q8TCU4 4167 aa2.61□□□□□ -1.99
RNU6-249P-201ENST00000363016 RPL39P5Q59GN2 51 aa2.61□□□□□ -1.99
RNU6-249P-201ENST00000363016 H3BUA1 57 aa2.6□□□□□ -1.99
RNU6-249P-201ENST00000363016 BRD3OSQ6XYD6 125 aa2.6□□□□□ -1.99
RNU6-249P-201ENST00000363016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.59□□□□□ -1.99
RNU6-249P-201ENST00000363016 DEFB130BP0DP73 79 aa2.59□□□□□ -1.99
RNU6-249P-201ENST00000363016 DEFB130AP0DP74 79 aa2.59□□□□□ -1.99
RNU6-249P-201ENST00000363016 DOPEY2Q9Y3R5 2298 aa2.57□□□□□ -2
RNU6-249P-201ENST00000363016 KNL1Q8NG31 2342 aa2.57□□□□□ -2
RNU6-249P-201ENST00000363016 DEFB108AA8MXU0 73 aa2.57□□□□□ -2
RNU6-249P-201ENST00000363016 DEFB109BQ30KR1 87 aa2.57□□□□□ -2
RNU6-249P-201ENST00000363016 AHCTF1Q8WYP5 2266 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms