RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 NBEAQ8NFP9 2946 aa11.06□□□□□ -0.64
CLSTN1-201ENST00000361311 A0A0J9YWU9 116 aa11.06□□□□□ -0.64
CLSTN1-201ENST00000361311 IGKV4-1P06312 121 aa11.06□□□□□ -0.64
CLSTN1-201ENST00000361311 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-201ENST00000361311 KPRPQ5T749 579 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-201ENST00000361311 VPS13AQ96RL7 3174 aa11.05□□□□□ -0.64
CLSTN1-201ENST00000361311 SEC61GP60059 68 aa11.03□□□□□ -0.64
CLSTN1-201ENST00000361311 SMR3AQ99954 134 aa11.03□□□□□ -0.64
CLSTN1-201ENST00000361311 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
CLSTN1-201ENST00000361311 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
CLSTN1-201ENST00000361311 DEFB131BA0A096LNP1 70 aa11.02□□□□□ -0.65
CLSTN1-201ENST00000361311 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
CLSTN1-201ENST00000361311 PRR15LQ9BU68 103 aa11.01□□□□□ -0.65
CLSTN1-201ENST00000361311 SMIM29Q86T20 159 aa11.01□□□□□ -0.65
CLSTN1-201ENST00000361311 C11orf45Q8TAV5 145 aa11.01□□□□□ -0.65
CLSTN1-201ENST00000361311 XIRP2A4UGR9 3374 aa11□□□□□ -0.65
CLSTN1-201ENST00000361311 DNAH14Q0VDD8 3507 aa11□□□□□ -0.65
CLSTN1-201ENST00000361311 KLKP1Q107X0 134 aa10.99□□□□□ -0.65
CLSTN1-201ENST00000361311 H7BZZ5 65 aa10.99□□□□□ -0.65
CLSTN1-201ENST00000361311 USP34Q70CQ2 3546 aa10.99□□□□□ -0.65
CLSTN1-201ENST00000361311 B9D2Q9BPU9 175 aa10.98□□□□□ -0.65
CLSTN1-201ENST00000361311 LINC00474Q9P2X8 69 aa10.98□□□□□ -0.65
CLSTN1-201ENST00000361311 CENPEQ02224 2701 aa10.98□□□□□ -0.65
CLSTN1-201ENST00000361311 CDH23Q9H251 3354 aa10.96□□□□□ -0.65
CLSTN1-201ENST00000361311 Q6ZRU5 148 aa10.96□□□□□ -0.65
CLSTN1-201ENST00000361311 DSPP15924 2871 aaKnown RBP10.96□□□□□ -0.65
CLSTN1-201ENST00000361311 KIAA0087Q14695 138 aa10.94□□□□□ -0.66
CLSTN1-201ENST00000361311 HCG22E2RYF7 251 aa10.94□□□□□ -0.66
CLSTN1-201ENST00000361311 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
CLSTN1-201ENST00000361311 C6orf48Q9UBA6 75 aa10.94□□□□□ -0.66
CLSTN1-201ENST00000361311 WDFY4Q6ZS81 3184 aa10.93□□□□□ -0.66
CLSTN1-201ENST00000361311 ELOF1P60002 83 aaKnown RBP10.93□□□□□ -0.66
CLSTN1-201ENST00000361311 LAMA1P25391 3075 aa10.93□□□□□ -0.66
CLSTN1-201ENST00000361311 A0A087WSZ3 146 aa10.91□□□□□ -0.66
CLSTN1-201ENST00000361311 RETNQ9HD89 108 aa10.91□□□□□ -0.66
CLSTN1-201ENST00000361311 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
CLSTN1-201ENST00000361311 PLAC8L1A1L4L8 177 aa10.91□□□□□ -0.66
CLSTN1-201ENST00000361311 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
CLSTN1-201ENST00000361311 MGAQ8IWI9 3026 aa10.9□□□□□ -0.66
CLSTN1-201ENST00000361311 CASC2Q6XLA1 102 aa10.9□□□□□ -0.66
CLSTN1-201ENST00000361311 WIPF1O43516 503 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 H0Y9P7 68 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 LYPD5Q6UWN5 251 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 IGHV4-30-4P0DP06 118 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 CELSR3Q9NYQ7 3312 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 FREM2Q5SZK8 3169 aa10.89□□□□□ -0.67
CLSTN1-201ENST00000361311 OBSCN-AS1Q96MR7 158 aa10.88□□□□□ -0.67
CLSTN1-201ENST00000361311 ERC2-IT1O76042 136 aa10.88□□□□□ -0.67
CLSTN1-201ENST00000361311 hDV103S1A0JD37 113 aa10.88□□□□□ -0.67
CLSTN1-201ENST00000361311 IGLV6-57P01721 117 aa10.88□□□□□ -0.67
CLSTN1-201ENST00000361311 VCANP13611 3396 aa10.87□□□□□ -0.67
CLSTN1-201ENST00000361311 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.87□□□□□ -0.67
CLSTN1-201ENST00000361311 FRYQ5TBA9 3013 aa10.87□□□□□ -0.67
CLSTN1-201ENST00000361311 CYSTM1Q9H1C7 97 aa10.85□□□□□ -0.67
CLSTN1-201ENST00000361311 REG3GQ6UW15 175 aa10.85□□□□□ -0.67
CLSTN1-201ENST00000361311 C7orf33Q8WU49 177 aa10.85□□□□□ -0.67
CLSTN1-201ENST00000361311 MAST4O15021 2626 aa10.84□□□□□ -0.67
CLSTN1-201ENST00000361311 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
CLSTN1-201ENST00000361311 LIMD2Q9BT23 127 aa10.84□□□□□ -0.67
CLSTN1-201ENST00000361311 C14orf177Q52M58 125 aa10.83□□□□□ -0.68
CLSTN1-201ENST00000361311 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
CLSTN1-201ENST00000361311 ZNF292O60281 2723 aa10.83□□□□□ -0.68
CLSTN1-201ENST00000361311 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
CLSTN1-201ENST00000361311 A0A1B0GW54 56 aa10.82□□□□□ -0.68
CLSTN1-201ENST00000361311 USP24Q9UPU5 2620 aa10.82□□□□□ -0.68
CLSTN1-201ENST00000361311 Q6ZTC4 211 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 Q8NBF4 154 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 IL17DQ8TAD2 202 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 C16orf95Q9H693 158 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 X6R8D5 127 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 F8WDY8 70 aa10.81□□□□□ -0.68
CLSTN1-201ENST00000361311 CFAP46Q8IYW2 2715 aa10.8□□□□□ -0.68
CLSTN1-201ENST00000361311 M0R2N4 97 aa10.79□□□□□ -0.68
CLSTN1-201ENST00000361311 C1orf64Q8NEQ6 169 aa10.79□□□□□ -0.68
CLSTN1-201ENST00000361311 TRBV7-4A0A0J9YYF1 115 aa10.79□□□□□ -0.68
CLSTN1-201ENST00000361311 Q9BRP9 147 aa10.79□□□□□ -0.68
CLSTN1-201ENST00000361311 ATRQ13535 2644 aa10.78□□□□□ -0.68
CLSTN1-201ENST00000361311 VPREB1P12018 145 aa10.77□□□□□ -0.69
CLSTN1-201ENST00000361311 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
CLSTN1-201ENST00000361311 GVQW2A0A096LPI5 108 aaPredicted RBP10.77□□□□□ -0.69
CLSTN1-201ENST00000361311 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.69
CLSTN1-201ENST00000361311 Q5XG85 94 aa10.76□□□□□ -0.69
CLSTN1-201ENST00000361311 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
CLSTN1-201ENST00000361311 IGLV9-49A0A0B4J1Y8 123 aa10.76□□□□□ -0.69
CLSTN1-201ENST00000361311 PRLHP81277 87 aa10.74□□□□□ -0.69
CLSTN1-201ENST00000361311 A8MUN3 132 aa10.74□□□□□ -0.69
CLSTN1-201ENST00000361311 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
CLSTN1-201ENST00000361311 CSNK1G2-AS1Q8NCQ2 148 aa10.73□□□□□ -0.69
CLSTN1-201ENST00000361311 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
CLSTN1-201ENST00000361311 Q6ZRX8 168 aa10.73□□□□□ -0.69
CLSTN1-201ENST00000361311 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
CLSTN1-201ENST00000361311 FSHBP01225 129 aa10.72□□□□□ -0.69
CLSTN1-201ENST00000361311 FRYLO94915 3013 aa10.72□□□□□ -0.69
CLSTN1-201ENST00000361311 ST20-AS1Q8NBB2 130 aa10.71□□□□□ -0.69
CLSTN1-201ENST00000361311 K7EQZ3 153 aa10.7□□□□□ -0.7
CLSTN1-201ENST00000361311 A0A096LNT2 108 aa10.69□□□□□ -0.7
CLSTN1-201ENST00000361311 LINC00476Q8WZB0 136 aa10.69□□□□□ -0.7
CLSTN1-201ENST00000361311 IGHV6-1A0A0B4J1U7 121 aa10.68□□□□□ -0.7
CLSTN1-201ENST00000361311 Q6ZRP5 223 aa10.67□□□□□ -0.7
CLSTN1-201ENST00000361311 OXTP01178 125 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms