RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 HIST1H2BCP62807 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
GDPD3-201ENST00000360688 TYMSOSQ8TAI1 123 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
GDPD3-201ENST00000360688 H0Y8G0 127 aa8.81□□□□□ -1
GDPD3-201ENST00000360688 FABP4P15090 132 aa8.81□□□□□ -1
GDPD3-201ENST00000360688 SFTA2Q6UW10 78 aa8.81□□□□□ -1
GDPD3-201ENST00000360688 LINC00167Q96N53 147 aa8.81□□□□□ -1
GDPD3-201ENST00000360688 MUC17Q685J3 4493 aa8.81□□□□□ -1
GDPD3-201ENST00000360688 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
GDPD3-201ENST00000360688 ANAPC11Q9NYG5 84 aa8.8□□□□□ -1
GDPD3-201ENST00000360688 TMEM223A0PJW6 202 aa8.8□□□□□ -1
GDPD3-201ENST00000360688 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
GDPD3-201ENST00000360688 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
GDPD3-201ENST00000360688 MAP1LC3CQ9BXW4 147 aa8.79□□□□□ -1
GDPD3-201ENST00000360688 GAGE10A6NGK3 116 aa8.78□□□□□ -1
GDPD3-201ENST00000360688 ATP6V1G1O75348 118 aa8.78□□□□□ -1
GDPD3-201ENST00000360688 PLNP26678 52 aa8.78□□□□□ -1
GDPD3-201ENST00000360688 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
GDPD3-201ENST00000360688 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
GDPD3-201ENST00000360688 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
GDPD3-201ENST00000360688 DPM2O94777 84 aa8.76□□□□□ -1.01
GDPD3-201ENST00000360688 COX17Q14061 63 aa8.76□□□□□ -1.01
GDPD3-201ENST00000360688 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
GDPD3-201ENST00000360688 UBE2AP49459 152 aa8.75□□□□□ -1.01
GDPD3-201ENST00000360688 IGKCP01834 107 aa8.74□□□□□ -1.01
GDPD3-201ENST00000360688 PFN2P35080 140 aa8.74□□□□□ -1.01
GDPD3-201ENST00000360688 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
GDPD3-201ENST00000360688 COA6Q5JTJ3 125 aaKnown RBP8.74□□□□□ -1.01
GDPD3-201ENST00000360688 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
GDPD3-201ENST00000360688 ZNF625Q96I27 306 aaPredicted RBP8.74□□□□□ -1.01
GDPD3-201ENST00000360688 HERVK_113P61574 105 aa8.73□□□□□ -1.01
GDPD3-201ENST00000360688 NKAPP1Q8N9T2 125 aa8.73□□□□□ -1.01
GDPD3-201ENST00000360688 HERV-K104P63124 156 aa8.72□□□□□ -1.01
GDPD3-201ENST00000360688 PMCHL2Q9BQD1 86 aa8.72□□□□□ -1.01
GDPD3-201ENST00000360688 IGKV2-28A0A075B6P5 120 aa8.71□□□□□ -1.02
GDPD3-201ENST00000360688 SYS1-DBNDD2H3BUS1 97 aa8.71□□□□□ -1.02
GDPD3-201ENST00000360688 IGKV2D-28P01615 120 aa8.71□□□□□ -1.02
GDPD3-201ENST00000360688 PLEKHB2Q96CS7 222 aa8.71□□□□□ -1.02
GDPD3-201ENST00000360688 MYMXA0A1B0GTQ4 84 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 LEPROTO15243 131 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 TPRXLQ17RH7 258 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
GDPD3-201ENST00000360688 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 LINC00587B1AMM8 73 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 LINC00158P58513 81 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 PRLHP81277 87 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 SND1-IT1Q9HBX3 110 aa8.69□□□□□ -1.02
GDPD3-201ENST00000360688 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
GDPD3-201ENST00000360688 J3QQQ9 107 aa8.67□□□□□ -1.02
GDPD3-201ENST00000360688 NMUP48645 174 aa8.67□□□□□ -1.02
GDPD3-201ENST00000360688 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
GDPD3-201ENST00000360688 LINC01545Q5VT33 79 aa8.67□□□□□ -1.02
GDPD3-201ENST00000360688 LGALS3P17931 250 aaKnown RBP8.66□□□□□ -1.02
GDPD3-201ENST00000360688 CTAG1AP78358 180 aa8.66□□□□□ -1.02
GDPD3-201ENST00000360688 FAM19A1Q7Z5A9 133 aa8.66□□□□□ -1.02
GDPD3-201ENST00000360688 TMEM126AQ9H061 195 aa8.66□□□□□ -1.02
GDPD3-201ENST00000360688 A0A0U1RRA0 63 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 C3orf79P0CE67 100 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 SMIM13P0DJ93 91 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 VPREB1P12018 145 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
GDPD3-201ENST00000360688 E9PLD3 99 aa8.64□□□□□ -1.03
GDPD3-201ENST00000360688 KRTDAPP60985 99 aa8.64□□□□□ -1.03
GDPD3-201ENST00000360688 KRTAP9-6A0A140TA67 174 aa8.63□□□□□ -1.03
GDPD3-201ENST00000360688 C20orf202A1L168 122 aa8.63□□□□□ -1.03
GDPD3-201ENST00000360688 M0R378 163 aa8.63□□□□□ -1.03
GDPD3-201ENST00000360688 C3orf22Q8N5N4 141 aa8.63□□□□□ -1.03
GDPD3-201ENST00000360688 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
GDPD3-201ENST00000360688 Q8NDZ9 215 aa8.62□□□□□ -1.03
GDPD3-201ENST00000360688 S100A6P06703 90 aa8.61□□□□□ -1.03
GDPD3-201ENST00000360688 S100A2P29034 98 aa8.61□□□□□ -1.03
GDPD3-201ENST00000360688 AKR1D1P51857 326 aa8.61□□□□□ -1.03
GDPD3-201ENST00000360688 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
GDPD3-201ENST00000360688 BOD1L2Q8IYS8 172 aa8.58□□□□□ -1.04
GDPD3-201ENST00000360688 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
GDPD3-201ENST00000360688 HIGD2AQ9BW72 106 aa8.58□□□□□ -1.04
GDPD3-201ENST00000360688 SPAG11AQ6PDA7 123 aa8.57□□□□□ -1.04
GDPD3-201ENST00000360688 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
GDPD3-201ENST00000360688 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
GDPD3-201ENST00000360688 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
GDPD3-201ENST00000360688 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
GDPD3-201ENST00000360688 DAND5Q8N907 189 aa8.55□□□□□ -1.04
GDPD3-201ENST00000360688 SPRR4Q96PI1 79 aa8.55□□□□□ -1.04
GDPD3-201ENST00000360688 HIST1H2BLQ99880 126 aa8.55□□□□□ -1.04
GDPD3-201ENST00000360688 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
GDPD3-201ENST00000360688 ZNF815PA8K554 130 aa8.54□□□□□ -1.04
GDPD3-201ENST00000360688 NCR3O14931 201 aa8.54□□□□□ -1.04
GDPD3-201ENST00000360688 TIMM17BO60830 172 aa8.52□□□□□ -1.05
GDPD3-201ENST00000360688 SNRPEP62304 92 aaKnown RBP8.52□□□□□ -1.05
GDPD3-201ENST00000360688 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
GDPD3-201ENST00000360688 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
GDPD3-201ENST00000360688 ATOH7Q8N100 152 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms