RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 SMIM26A0A096LP01 95 aa11.7□□□□□ -0.54
COL4A2-201ENST00000360467 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
COL4A2-201ENST00000360467 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
COL4A2-201ENST00000360467 WDR87Q6ZQQ6 2873 aa11.69□□□□□ -0.54
COL4A2-201ENST00000360467 PLA2G1BP04054 148 aaKnown RBP11.68□□□□□ -0.54
COL4A2-201ENST00000360467 Q8NAQ8 132 aa11.68□□□□□ -0.54
COL4A2-201ENST00000360467 Q96NJ1 140 aa11.68□□□□□ -0.54
COL4A2-201ENST00000360467 WWC2-AS2Q96NR7 200 aa11.68□□□□□ -0.54
COL4A2-201ENST00000360467 MUC4Q99102 2169 aa11.67□□□□□ -0.54
COL4A2-201ENST00000360467 Q6ZRP5 223 aa11.67□□□□□ -0.54
COL4A2-201ENST00000360467 TMEM254Q8TBM7 123 aa11.67□□□□□ -0.54
COL4A2-201ENST00000360467 IGLV5-39A0A0G2JS06 123 aa11.66□□□□□ -0.54
COL4A2-201ENST00000360467 LINC00313P59037 77 aa11.65□□□□□ -0.54
COL4A2-201ENST00000360467 LINC00476Q8WZB0 136 aa11.64□□□□□ -0.55
COL4A2-201ENST00000360467 IGLV8-61A0A075B6I0 122 aa11.64□□□□□ -0.55
COL4A2-201ENST00000360467 FAM218AQ96MZ4 157 aa11.64□□□□□ -0.55
COL4A2-201ENST00000360467 KRTAP10-11P60412 298 aa11.64□□□□□ -0.55
COL4A2-201ENST00000360467 DNAH10OSP0CZ25 163 aa11.63□□□□□ -0.55
COL4A2-201ENST00000360467 ELOF1P60002 83 aaKnown RBP11.61□□□□□ -0.55
COL4A2-201ENST00000360467 Q8NBF4 154 aa11.6□□□□□ -0.55
COL4A2-201ENST00000360467 LRRK2Q5S007 2527 aa11.59□□□□□ -0.55
COL4A2-201ENST00000360467 A0A1B0GU69 56 aa11.59□□□□□ -0.55
COL4A2-201ENST00000360467 H3BNG1 76 aa11.59□□□□□ -0.55
COL4A2-201ENST00000360467 SMR3BP02814 79 aaPredicted RBP11.59□□□□□ -0.55
COL4A2-201ENST00000360467 MYO18BQ8IUG5 2567 aa11.59□□□□□ -0.55
COL4A2-201ENST00000360467 CXCL6P80162 114 aa11.58□□□□□ -0.56
COL4A2-201ENST00000360467 Q6ZRX8 168 aa11.58□□□□□ -0.56
COL4A2-201ENST00000360467 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
COL4A2-201ENST00000360467 SPAG11AQ6PDA7 123 aa11.55□□□□□ -0.56
COL4A2-201ENST00000360467 ATP11AUNQ6ZP68 121 aa11.55□□□□□ -0.56
COL4A2-201ENST00000360467 PCSK5Q92824 1860 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 C9orf92A6NGG3 77 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 LINC01546A6NGU7 62 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 K7EIL1 84 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 CENPFP49454 3210 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 BCE1O60756 84 aa11.54□□□□□ -0.56
COL4A2-201ENST00000360467 COX6B2Q6YFQ2 88 aa11.53□□□□□ -0.56
COL4A2-201ENST00000360467 ACYP2P14621 99 aa11.52□□□□□ -0.56
COL4A2-201ENST00000360467 SERTAD4-AS1Q5TG53 156 aa11.52□□□□□ -0.57
COL4A2-201ENST00000360467 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
COL4A2-201ENST00000360467 KRTAP10-3P60369 221 aa11.51□□□□□ -0.57
COL4A2-201ENST00000360467 GVQW2A0A096LPI5 108 aaPredicted RBP11.5□□□□□ -0.57
COL4A2-201ENST00000360467 DOPEY1Q5JWR5 2465 aa11.5□□□□□ -0.57
COL4A2-201ENST00000360467 Q6ZQT0 140 aa11.47□□□□□ -0.57
COL4A2-201ENST00000360467 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
COL4A2-201ENST00000360467 IGLV5-45A0A087WSX0 123 aa11.46□□□□□ -0.57
COL4A2-201ENST00000360467 CDIP1Q9H305 208 aa11.45□□□□□ -0.58
COL4A2-201ENST00000360467 DSCR10P59022 87 aa11.44□□□□□ -0.58
COL4A2-201ENST00000360467 PIEZO1Q92508 2521 aa11.44□□□□□ -0.58
COL4A2-201ENST00000360467 ANAPC11Q9NYG5 84 aa11.43□□□□□ -0.58
COL4A2-201ENST00000360467 A0A0G2JQZ4 141 aa11.42□□□□□ -0.58
COL4A2-201ENST00000360467 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
COL4A2-201ENST00000360467 SMCPP49901 116 aaPredicted RBP11.42□□□□□ -0.58
COL4A2-201ENST00000360467 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
COL4A2-201ENST00000360467 FN1P02751 2386 aaKnown RBP11.39□□□□□ -0.59
COL4A2-201ENST00000360467 OBSCN-AS1Q96MR7 158 aa11.38□□□□□ -0.59
COL4A2-201ENST00000360467 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
COL4A2-201ENST00000360467 VPREB1P12018 145 aa11.38□□□□□ -0.59
COL4A2-201ENST00000360467 CSNK1G2-AS1Q8NCQ2 148 aa11.38□□□□□ -0.59
COL4A2-201ENST00000360467 ZFYVE26Q68DK2 2539 aa11.37□□□□□ -0.59
COL4A2-201ENST00000360467 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
COL4A2-201ENST00000360467 TRAV22A0A0B4J277 110 aa11.36□□□□□ -0.59
COL4A2-201ENST00000360467 K7EQZ3 153 aa11.36□□□□□ -0.59
COL4A2-201ENST00000360467 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
COL4A2-201ENST00000360467 LINC00304Q8N9R0 145 aa11.35□□□□□ -0.59
COL4A2-201ENST00000360467 C15orf56Q8N910 161 aa11.35□□□□□ -0.59
COL4A2-201ENST00000360467 LOC110117498A0A087WWA1 95 aa11.33□□□□□ -0.6
COL4A2-201ENST00000360467 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
COL4A2-201ENST00000360467 UTRNP46939 3433 aa11.32□□□□□ -0.6
COL4A2-201ENST00000360467 IGLV6-57P01721 117 aa11.31□□□□□ -0.6
COL4A2-201ENST00000360467 MYO9AB2RTY4 2548 aa11.31□□□□□ -0.6
COL4A2-201ENST00000360467 A0A087WTM6 91 aa11.31□□□□□ -0.6
COL4A2-201ENST00000360467 A8MWP4 228 aa11.3□□□□□ -0.6
COL4A2-201ENST00000360467 C19orf73Q9NVV2 129 aa11.3□□□□□ -0.6
COL4A2-201ENST00000360467 APLNQ9ULZ1 77 aa11.3□□□□□ -0.6
COL4A2-201ENST00000360467 MRPL34Q9BQ48 92 aaKnown RBP11.29□□□□□ -0.6
COL4A2-201ENST00000360467 C9orf129Q5T035 196 aaKnown RBP11.28□□□□□ -0.6
COL4A2-201ENST00000360467 C4orf26Q17RF5 130 aa11.27□□□□□ -0.6
COL4A2-201ENST00000360467 CASC10Q5T4H9 136 aa11.27□□□□□ -0.6
COL4A2-201ENST00000360467 IGFL1Q6UW32 110 aa11.27□□□□□ -0.6
COL4A2-201ENST00000360467 TLN2Q9Y4G6 2542 aa11.27□□□□□ -0.61
COL4A2-201ENST00000360467 ZNF462Q96JM2 2506 aa11.26□□□□□ -0.61
COL4A2-201ENST00000360467 LITAFQ99732 161 aa11.26□□□□□ -0.61
COL4A2-201ENST00000360467 SPINT4Q6UDR6 99 aa11.24□□□□□ -0.61
COL4A2-201ENST00000360467 ANKRD11Q6UB99 2663 aaPredicted RBP11.24□□□□□ -0.61
COL4A2-201ENST00000360467 C8orf87E5RJ46 101 aa11.23□□□□□ -0.61
COL4A2-201ENST00000360467 ZNF861PO60384 105 aa11.23□□□□□ -0.61
COL4A2-201ENST00000360467 A0A096LNT2 108 aa11.22□□□□□ -0.61
COL4A2-201ENST00000360467 PRO0461Q9UI25 63 aa11.22□□□□□ -0.61
COL4A2-201ENST00000360467 GIG44P09565 113 aaPredicted RBP11.21□□□□□ -0.61
COL4A2-201ENST00000360467 ANKRD17O75179 2603 aaKnown RBP11.21□□□□□ -0.62
COL4A2-201ENST00000360467 KCNQ1DNQ9H478 68 aa11.2□□□□□ -0.62
COL4A2-201ENST00000360467 SSBP3-AS1Q7Z2R9 100 aa11.2□□□□□ -0.62
COL4A2-201ENST00000360467 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
COL4A2-201ENST00000360467 LOC101927531A0A1B0GV80 90 aa11.19□□□□□ -0.62
COL4A2-201ENST00000360467 A0A1B0GW54 56 aa11.19□□□□□ -0.62
COL4A2-201ENST00000360467 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
COL4A2-201ENST00000360467 LINC01600Q96MT4 127 aa11.18□□□□□ -0.62
COL4A2-201ENST00000360467 IGLV5-37A0A075B6J1 123 aa11.18□□□□□ -0.62
COL4A2-201ENST00000360467 H3BPC8 53 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms