RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 A0A096LPF7 62 aa13.85□□□□□ -0.19
CBWD3-201ENST00000360171 UQCRQO14949 82 aa13.85□□□□□ -0.19
CBWD3-201ENST00000360171 C3orf22Q8N5N4 141 aa13.85□□□□□ -0.19
CBWD3-201ENST00000360171 Q6ZTC4 211 aa13.84□□□□□ -0.19
CBWD3-201ENST00000360171 Q6JHZ5 121 aa13.83□□□□□ -0.19
CBWD3-201ENST00000360171 NANOS2P60321 138 aaKnown RBP13.82□□□□□ -0.2
CBWD3-201ENST00000360171 CD164L2Q6UWJ8 174 aa13.82□□□□□ -0.2
CBWD3-201ENST00000360171 KIAA0087Q14695 138 aa13.81□□□□□ -0.2
CBWD3-201ENST00000360171 LINC00526Q96FQ7 95 aa13.81□□□□□ -0.2
CBWD3-201ENST00000360171 C11orf45Q8TAV5 145 aa13.8□□□□□ -0.2
CBWD3-201ENST00000360171 ATOX1O00244 68 aa13.79□□□□□ -0.2
CBWD3-201ENST00000360171 COL7A1Q02388 2944 aa13.79□□□□□ -0.2
CBWD3-201ENST00000360171 LINC00846Q9NV44 126 aa13.79□□□□□ -0.2
CBWD3-201ENST00000360171 JMJD7-PLA2G4BH0Y9G9 81 aa13.78□□□□□ -0.2
CBWD3-201ENST00000360171 NCR3O14931 201 aa13.78□□□□□ -0.2
CBWD3-201ENST00000360171 C9orf153Q5TBE3 101 aa13.78□□□□□ -0.2
CBWD3-201ENST00000360171 COX7CP15954 63 aa13.77□□□□□ -0.21
CBWD3-201ENST00000360171 CFAP161Q6P656 301 aa13.77□□□□□ -0.21
CBWD3-201ENST00000360171 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 DNAH9Q9NYC9 4486 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 SLPIP03973 132 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 CCKP06307 115 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 KRTAP21-3Q3LHN1 58 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 Q8N814 137 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 MUC7Q8TAX7 377 aa13.76□□□□□ -0.21
CBWD3-201ENST00000360171 TMEM256-PLSCR3K7ERE1 68 aa13.75□□□□□ -0.21
CBWD3-201ENST00000360171 LINC00269Q8N2A0 174 aa13.75□□□□□ -0.21
CBWD3-201ENST00000360171 CHCHD10Q8WYQ3 142 aaPredicted RBP13.75□□□□□ -0.21
CBWD3-201ENST00000360171 SMIM20Q8N5G0 67 aa13.74□□□□□ -0.21
CBWD3-201ENST00000360171 C2orf48Q96LS8 159 aa13.74□□□□□ -0.21
CBWD3-201ENST00000360171 RPL18AQ02543 176 aaKnown RBP13.73□□□□□ -0.21
CBWD3-201ENST00000360171 DEFB131BA0A096LNP1 70 aa13.72□□□□□ -0.21
CBWD3-201ENST00000360171 REG3AQ06141 175 aa13.72□□□□□ -0.21
CBWD3-201ENST00000360171 B9D2Q9BPU9 175 aa13.72□□□□□ -0.21
CBWD3-201ENST00000360171 S100A7L2Q5SY68 101 aa13.72□□□□□ -0.21
CBWD3-201ENST00000360171 H3BNG1 76 aa13.71□□□□□ -0.22
CBWD3-201ENST00000360171 CRYGAP11844 174 aa13.71□□□□□ -0.22
CBWD3-201ENST00000360171 ANGP03950 147 aaKnown RBP13.69□□□□□ -0.22
CBWD3-201ENST00000360171 PRR3P79522 188 aaKnown RBP13.69□□□□□ -0.22
CBWD3-201ENST00000360171 IGKV3D-7A0A0C4DH55 119 aa13.68□□□□□ -0.22
CBWD3-201ENST00000360171 ATP5EP2Q5VTU8 51 aa13.68□□□□□ -0.22
CBWD3-201ENST00000360171 STAB2Q8WWQ8 2551 aa13.67□□□□□ -0.22
CBWD3-201ENST00000360171 MEGF8Q7Z7M0 2845 aa13.67□□□□□ -0.22
CBWD3-201ENST00000360171 LELP1Q5T871 98 aa13.66□□□□□ -0.22
CBWD3-201ENST00000360171 LYPD5Q6UWN5 251 aa13.66□□□□□ -0.22
CBWD3-201ENST00000360171 Q8N3U1 123 aa13.66□□□□□ -0.22
CBWD3-201ENST00000360171 TRAV10A0A0B4J240 114 aa13.65□□□□□ -0.22
CBWD3-201ENST00000360171 C6orf99Q4VX62 202 aa13.65□□□□□ -0.22
CBWD3-201ENST00000360171 IGLV10-54A0A075B6I4 117 aa13.64□□□□□ -0.23
CBWD3-201ENST00000360171 C9orf116Q5BN46 136 aaPredicted RBP13.64□□□□□ -0.23
CBWD3-201ENST00000360171 LINC00575Q6W349 94 aa13.64□□□□□ -0.23
CBWD3-201ENST00000360171 SERP2Q8N6R1 65 aa13.63□□□□□ -0.23
CBWD3-201ENST00000360171 PRKDCP78527 4128 aaKnown RBP13.62□□□□□ -0.23
CBWD3-201ENST00000360171 Q8NDZ9 215 aa13.62□□□□□ -0.23
CBWD3-201ENST00000360171 USP17L23D6RBM5 183 aa13.61□□□□□ -0.23
CBWD3-201ENST00000360171 SPAG11BQ08648 103 aa13.61□□□□□ -0.23
CBWD3-201ENST00000360171 PRR34Q9NV39 138 aa13.6□□□□□ -0.23
CBWD3-201ENST00000360171 TRBV10-3A0A0K0K1G6 114 aa13.59□□□□□ -0.23
CBWD3-201ENST00000360171 ESRGQ1W209 222 aa13.59□□□□□ -0.23
CBWD3-201ENST00000360171 A0A087WVE0 104 aa13.59□□□□□ -0.23
CBWD3-201ENST00000360171 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-201ENST00000360171 H3BQ85 93 aa13.58□□□□□ -0.24
CBWD3-201ENST00000360171 IGLV6-57P01721 117 aa13.58□□□□□ -0.24
CBWD3-201ENST00000360171 hADV29S1A0JD25 119 aa13.58□□□□□ -0.24
CBWD3-201ENST00000360171 UNQ6190/PRO20217Q6UXQ8 127 aa13.58□□□□□ -0.24
CBWD3-201ENST00000360171 ZNF561-AS1K7EIQ3 104 aa13.57□□□□□ -0.24
CBWD3-201ENST00000360171 C10orf25Q5T742 122 aa13.57□□□□□ -0.24
CBWD3-201ENST00000360171 WFDC10BQ8IUB3 73 aa13.57□□□□□ -0.24
CBWD3-201ENST00000360171 LOC110117498A0A087WWA1 95 aa13.56□□□□□ -0.24
CBWD3-201ENST00000360171 UBL5Q9BZL1 73 aa13.56□□□□□ -0.24
CBWD3-201ENST00000360171 C6orf223Q8N319 242 aa13.55□□□□□ -0.24
CBWD3-201ENST00000360171 UPK3BQ9BT76 320 aa13.55□□□□□ -0.24
CBWD3-201ENST00000360171 RBM3P98179 157 aaKnown RBP13.54□□□□□ -0.24
CBWD3-201ENST00000360171 Q6ZQT0 140 aa13.54□□□□□ -0.24
CBWD3-201ENST00000360171 PDE6GP18545 87 aa13.5□□□□□ -0.25
CBWD3-201ENST00000360171 TMEM258P61165 79 aa13.5□□□□□ -0.25
CBWD3-201ENST00000360171 RPS28P62857 69 aaKnown RBP13.5□□□□□ -0.25
CBWD3-201ENST00000360171 KLK12Q9UKR0 248 aa13.5□□□□□ -0.25
CBWD3-201ENST00000360171 J3KT08 172 aa13.49□□□□□ -0.25
CBWD3-201ENST00000360171 ENHOQ6UWT2 76 aa13.49□□□□□ -0.25
CBWD3-201ENST00000360171 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
CBWD3-201ENST00000360171 CYSTM1Q9H1C7 97 aa13.47□□□□□ -0.25
CBWD3-201ENST00000360171 LAMTOR3Q9UHA4 124 aa13.47□□□□□ -0.25
CBWD3-201ENST00000360171 BCE1O60756 84 aa13.46□□□□□ -0.25
CBWD3-201ENST00000360171 DIRC1Q969H9 104 aa13.46□□□□□ -0.25
CBWD3-201ENST00000360171 C6orf48Q9UBA6 75 aa13.46□□□□□ -0.25
CBWD3-201ENST00000360171 TRAV23DV6A0A075B6W5 121 aa13.45□□□□□ -0.26
CBWD3-201ENST00000360171 GHRHP01286 108 aa13.45□□□□□ -0.26
CBWD3-201ENST00000360171 CSMD3Q7Z407 3707 aa13.45□□□□□ -0.26
CBWD3-201ENST00000360171 DYNC2H1Q8NCM8 4307 aaKnown RBP13.45□□□□□ -0.26
CBWD3-201ENST00000360171 Q6ZQY7 126 aa13.45□□□□□ -0.26
CBWD3-201ENST00000360171 FAM19A1Q7Z5A9 133 aa13.45□□□□□ -0.26
CBWD3-201ENST00000360171 TRBV7-6A0A0J9YX20 115 aa13.44□□□□□ -0.26
CBWD3-201ENST00000360171 DSCR8Q96T75 97 aa13.44□□□□□ -0.26
CBWD3-201ENST00000360171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-201ENST00000360171 LINC01556Q5JQF7 62 aa13.43□□□□□ -0.26
CBWD3-201ENST00000360171 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
CBWD3-201ENST00000360171 FBN3Q75N90 2809 aa13.41□□□□□ -0.26
CBWD3-201ENST00000360171 DNAH10OSP0CZ25 163 aa13.4□□□□□ -0.26
CBWD3-201ENST00000360171 ZNF73O43830 326 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms