RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 M0R378 163 aa10.74□□□□□ -0.69
RTN3-205ENST00000356000 A8MUN3 132 aa10.73□□□□□ -0.69
RTN3-205ENST00000356000 Q6ZQY7 126 aa10.73□□□□□ -0.69
RTN3-205ENST00000356000 HIVEP1P15822 2718 aa10.73□□□□□ -0.69
RTN3-205ENST00000356000 CENPEQ02224 2701 aa10.72□□□□□ -0.69
RTN3-205ENST00000356000 PSCAO43653 123 aa10.71□□□□□ -0.69
RTN3-205ENST00000356000 TEP1Q99973 2627 aaKnown RBP10.71□□□□□ -0.69
RTN3-205ENST00000356000 IGLV4-60A0A075B6I1 120 aa10.71□□□□□ -0.69
RTN3-205ENST00000356000 Q5VV11 94 aa10.71□□□□□ -0.69
RTN3-205ENST00000356000 CYP4F30PQ9H0H9 118 aa10.71□□□□□ -0.69
RTN3-205ENST00000356000 DEFB131AP59861 70 aa10.71□□□□□ -0.7
RTN3-205ENST00000356000 Q8IZM0 81 aa10.71□□□□□ -0.7
RTN3-205ENST00000356000 C11orf71Q6IPW1 123 aa10.7□□□□□ -0.7
RTN3-205ENST00000356000 ZCCHC13Q8WW36 166 aaKnown RBP10.7□□□□□ -0.7
RTN3-205ENST00000356000 SVEP1Q4LDE5 3571 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 ABCA2Q9BZC7 2435 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 A0A1W2PPR1 153 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 NDUFS5O43920 106 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 TRBV6-8A0A0A6YYG3 113 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 COX7BP24311 80 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 COX17Q14061 63 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 LY6EQ16553 131 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 Q8NDZ9 215 aa10.68□□□□□ -0.7
RTN3-205ENST00000356000 TRGV1A0A0A0MS02 117 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 LINC00269Q8N2A0 174 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 LINC00612Q8N6U2 182 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 C16orf90A8MZG2 172 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 UBE2AP49459 152 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 C11orf45Q8TAV5 145 aa10.67□□□□□ -0.7
RTN3-205ENST00000356000 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
RTN3-205ENST00000356000 CRYBG3Q68DQ2 2970 aa10.66□□□□□ -0.7
RTN3-205ENST00000356000 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
RTN3-205ENST00000356000 INSP01308 110 aa10.65□□□□□ -0.7
RTN3-205ENST00000356000 APOC4P55056 127 aa10.65□□□□□ -0.71
RTN3-205ENST00000356000 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.71
RTN3-205ENST00000356000 FAM30AQ9NZY2 134 aa10.65□□□□□ -0.71
RTN3-205ENST00000356000 A6NDX4 124 aa10.64□□□□□ -0.71
RTN3-205ENST00000356000 TRGV2A0A075B6R0 118 aa10.64□□□□□ -0.71
RTN3-205ENST00000356000 ANKHD1Q8IWZ3 2542 aaKnown RBP10.64□□□□□ -0.71
RTN3-205ENST00000356000 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
RTN3-205ENST00000356000 AKAP6Q13023 2319 aa10.63□□□□□ -0.71
RTN3-205ENST00000356000 INAFM1C9JVW0 142 aa10.63□□□□□ -0.71
RTN3-205ENST00000356000 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.63□□□□□ -0.71
RTN3-205ENST00000356000 IGHV4-30-2A0A087WSY4 118 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 KRTAP1-1Q07627 177 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 ATP11AUNQ6ZP68 121 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 BRD3OSQ6XYD6 125 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 SMR3AQ99954 134 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 CELA1Q9UNI1 258 aa10.62□□□□□ -0.71
RTN3-205ENST00000356000 A6NN06 94 aa10.6□□□□□ -0.71
RTN3-205ENST00000356000 H3BUX3 64 aa10.6□□□□□ -0.71
RTN3-205ENST00000356000 IGLV6-57P01721 117 aa10.6□□□□□ -0.71
RTN3-205ENST00000356000 C10orf25Q5T742 122 aa10.6□□□□□ -0.71
RTN3-205ENST00000356000 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
RTN3-205ENST00000356000 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
RTN3-205ENST00000356000 ZNF73O43830 326 aaPredicted RBP10.59□□□□□ -0.71
RTN3-205ENST00000356000 CCDC168Q8NDH2 2452 aa10.58□□□□□ -0.72
RTN3-205ENST00000356000 MDFIQ99750 246 aa10.58□□□□□ -0.72
RTN3-205ENST00000356000 ESM1Q9NQ30 184 aa10.58□□□□□ -0.72
RTN3-205ENST00000356000 IGHV4-28A0A0C4DH34 117 aa10.58□□□□□ -0.72
RTN3-205ENST00000356000 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
RTN3-205ENST00000356000 TRGV4A0A0C4DH28 118 aa10.57□□□□□ -0.72
RTN3-205ENST00000356000 HCG22E2RYF7 251 aa10.57□□□□□ -0.72
RTN3-205ENST00000356000 SPTSSBQ8NFR3 76 aa10.57□□□□□ -0.72
RTN3-205ENST00000356000 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
RTN3-205ENST00000356000 C10orf99Q6UWK7 81 aa10.56□□□□□ -0.72
RTN3-205ENST00000356000 ITPR3Q14573 2671 aa10.56□□□□□ -0.72
RTN3-205ENST00000356000 NF1P21359 2839 aa10.56□□□□□ -0.72
RTN3-205ENST00000356000 IGHV4-30-4P0DP06 118 aa10.55□□□□□ -0.72
RTN3-205ENST00000356000 C9orf116Q5BN46 136 aaPredicted RBP10.55□□□□□ -0.72
RTN3-205ENST00000356000 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
RTN3-205ENST00000356000 PRR4Q16378 134 aa10.55□□□□□ -0.72
RTN3-205ENST00000356000 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.54□□□□□ -0.72
RTN3-205ENST00000356000 CCL24O00175 119 aa10.54□□□□□ -0.72
RTN3-205ENST00000356000 LCA10Q71F78 164 aa10.54□□□□□ -0.72
RTN3-205ENST00000356000 MAP6D1Q9H9H5 199 aa10.54□□□□□ -0.72
RTN3-205ENST00000356000 Q8N9P0 234 aaPredicted RBP10.54□□□□□ -0.72
RTN3-205ENST00000356000 KLK12Q9UKR0 248 aa10.54□□□□□ -0.72
RTN3-205ENST00000356000 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
RTN3-205ENST00000356000 HIGD2BQ4VC39 106 aa10.53□□□□□ -0.72
RTN3-205ENST00000356000 POLQO75417 2590 aa10.52□□□□□ -0.72
RTN3-205ENST00000356000 C8orf87E5RJ46 101 aa10.52□□□□□ -0.73
RTN3-205ENST00000356000 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
RTN3-205ENST00000356000 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.51□□□□□ -0.731e-8■■■■□ 24
RTN3-205ENST00000356000 NDUFB1O75438 58 aa10.5□□□□□ -0.73
RTN3-205ENST00000356000 HRNRQ86YZ3 2850 aaPredicted RBP10.49□□□□□ -0.73
RTN3-205ENST00000356000 ELOF1P60002 83 aaKnown RBP10.49□□□□□ -0.73
RTN3-205ENST00000356000 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
RTN3-205ENST00000356000 IGHV4-61A0A0C4DH41 118 aa10.48□□□□□ -0.73
RTN3-205ENST00000356000 C3orf84H3BNL1 204 aa10.48□□□□□ -0.73
RTN3-205ENST00000356000 Q75L30 129 aa10.48□□□□□ -0.73
RTN3-205ENST00000356000 PRR15LQ9BU68 103 aa10.48□□□□□ -0.73
RTN3-205ENST00000356000 B9D2Q9BPU9 175 aa10.48□□□□□ -0.73
RTN3-205ENST00000356000 CR1P17927 2039 aa10.47□□□□□ -0.73
RTN3-205ENST00000356000 PRB2P02812 416 aaPredicted RBP10.47□□□□□ -0.73
RTN3-205ENST00000356000 ST20-AS1Q8NBB2 130 aa10.47□□□□□ -0.73
RTN3-205ENST00000356000 A0A1B0GUV1 79 aa10.46□□□□□ -0.74
RTN3-205ENST00000356000 IGHV4-59P01825 116 aa10.45□□□□□ -0.74
RTN3-205ENST00000356000 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms