RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ENHOQ6UWT2 76 aa13.23□□□□□ -0.29
COL13A1-201ENST00000354547 A0A087WVE0 104 aa13.23□□□□□ -0.29
COL13A1-201ENST00000354547 C4orf48Q5BLP8 95 aa13.23□□□□□ -0.29
COL13A1-201ENST00000354547 HIGD2BQ4VC39 106 aa13.21□□□□□ -0.3
COL13A1-201ENST00000354547 LYPD5Q6UWN5 251 aa13.2□□□□□ -0.3
COL13A1-201ENST00000354547 STAB1Q9NY15 2570 aa13.19□□□□□ -0.3
COL13A1-201ENST00000354547 TMEM256-PLSCR3K7ERE1 68 aa13.18□□□□□ -0.3
COL13A1-201ENST00000354547 WFDC10BQ8IUB3 73 aa13.18□□□□□ -0.3
COL13A1-201ENST00000354547 TENM3Q9P273 2699 aa13.18□□□□□ -0.3
COL13A1-201ENST00000354547 F8P00451 2351 aa13.17□□□□□ -0.3
COL13A1-201ENST00000354547 CCKP06307 115 aa13.17□□□□□ -0.3
COL13A1-201ENST00000354547 C9orf153Q5TBE3 101 aa13.17□□□□□ -0.3
COL13A1-201ENST00000354547 WFDC9Q8NEX5 89 aa13.17□□□□□ -0.3
COL13A1-201ENST00000354547 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
COL13A1-201ENST00000354547 HIST1H4AP62805 103 aaKnown RBP13.17□□□□□ -0.3
COL13A1-201ENST00000354547 PRR34Q9NV39 138 aa13.16□□□□□ -0.3
COL13A1-201ENST00000354547 LINC00167Q96N53 147 aa13.15□□□□□ -0.3
COL13A1-201ENST00000354547 C6orf48Q9UBA6 75 aa13.15□□□□□ -0.3
COL13A1-201ENST00000354547 LINC00575Q6W349 94 aa13.15□□□□□ -0.3
COL13A1-201ENST00000354547 LAMTOR3Q9UHA4 124 aa13.15□□□□□ -0.3
COL13A1-201ENST00000354547 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
COL13A1-201ENST00000354547 hADV29S1A0JD25 119 aa13.14□□□□□ -0.31
COL13A1-201ENST00000354547 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
COL13A1-201ENST00000354547 SMIM20Q8N5G0 67 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 NOTCH1P46531 2555 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 C3orf22Q8N5N4 141 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 A0A1B0GX51 115 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 Q6JHZ5 121 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 Q6ZTC4 211 aa13.13□□□□□ -0.31
COL13A1-201ENST00000354547 ZNF561-AS1K7EIQ3 104 aa13.12□□□□□ -0.31
COL13A1-201ENST00000354547 Q6ZQY7 126 aa13.11□□□□□ -0.31
COL13A1-201ENST00000354547 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
COL13A1-201ENST00000354547 MAST4O15021 2626 aa13.09□□□□□ -0.31
COL13A1-201ENST00000354547 UQCRQO14949 82 aa13.09□□□□□ -0.31
COL13A1-201ENST00000354547 IGLV6-57P01721 117 aa13.08□□□□□ -0.32
COL13A1-201ENST00000354547 KRTAP10-11P60412 298 aa13.08□□□□□ -0.32
COL13A1-201ENST00000354547 RBM3P98179 157 aaKnown RBP13.07□□□□□ -0.32
COL13A1-201ENST00000354547 M0R2N4 97 aa13.07□□□□□ -0.32
COL13A1-201ENST00000354547 FBN1P35555 2871 aaKnown RBP13.07□□□□□ -0.32
COL13A1-201ENST00000354547 ANK2Q01484 3957 aa13.06□□□□□ -0.32
COL13A1-201ENST00000354547 ATOX1O00244 68 aa13.06□□□□□ -0.32
COL13A1-201ENST00000354547 TRAV23DV6A0A075B6W5 121 aa13.06□□□□□ -0.32
COL13A1-201ENST00000354547 COX7CP15954 63 aa13.06□□□□□ -0.32
COL13A1-201ENST00000354547 FAM19A1Q7Z5A9 133 aa13.05□□□□□ -0.32
COL13A1-201ENST00000354547 Q6ZRU5 148 aa13.05□□□□□ -0.32
COL13A1-201ENST00000354547 C2orf48Q96LS8 159 aa13.04□□□□□ -0.32
COL13A1-201ENST00000354547 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
COL13A1-201ENST00000354547 ESRGQ1W209 222 aa13.04□□□□□ -0.32
COL13A1-201ENST00000354547 DIRC1Q969H9 104 aa13.03□□□□□ -0.32
COL13A1-201ENST00000354547 UBL5Q9BZL1 73 aa13.02□□□□□ -0.33
COL13A1-201ENST00000354547 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.33
COL13A1-201ENST00000354547 ZNF73O43830 326 aaPredicted RBP13.02□□□□□ -0.33
COL13A1-201ENST00000354547 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
COL13A1-201ENST00000354547 Q6ZQT0 140 aa13□□□□□ -0.33
COL13A1-201ENST00000354547 CYSTM1Q9H1C7 97 aa13□□□□□ -0.33
COL13A1-201ENST00000354547 DSCR8Q96T75 97 aa12.99□□□□□ -0.33
COL13A1-201ENST00000354547 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
COL13A1-201ENST00000354547 HAMPP81172 84 aa12.98□□□□□ -0.33
COL13A1-201ENST00000354547 C15orf56Q8N910 161 aa12.98□□□□□ -0.33
COL13A1-201ENST00000354547 WIPF1O43516 503 aa12.98□□□□□ -0.33
COL13A1-201ENST00000354547 COX7BP24311 80 aa12.98□□□□□ -0.33
COL13A1-201ENST00000354547 C1orf43Q9BWL3 253 aa12.98□□□□□ -0.33
COL13A1-201ENST00000354547 KRTAP26-1Q6PEX3 210 aa12.97□□□□□ -0.33
COL13A1-201ENST00000354547 VPREB1P12018 145 aa12.97□□□□□ -0.33
COL13A1-201ENST00000354547 DEFB131BA0A096LNP1 70 aa12.96□□□□□ -0.34
COL13A1-201ENST00000354547 SERP2Q8N6R1 65 aa12.94□□□□□ -0.34
COL13A1-201ENST00000354547 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
COL13A1-201ENST00000354547 EGFEM1PQ0D2K5 195 aa12.94□□□□□ -0.34
COL13A1-201ENST00000354547 Q6ZRP5 223 aa12.94□□□□□ -0.34
COL13A1-201ENST00000354547 GHRHP01286 108 aa12.93□□□□□ -0.34
COL13A1-201ENST00000354547 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
COL13A1-201ENST00000354547 NDUFC2-KCTD14E9PQ53 114 aa12.92□□□□□ -0.34
COL13A1-201ENST00000354547 C11orf45Q8TAV5 145 aa12.92□□□□□ -0.34
COL13A1-201ENST00000354547 M0R378 163 aa12.91□□□□□ -0.34
COL13A1-201ENST00000354547 CRYGAP11844 174 aa12.91□□□□□ -0.34
COL13A1-201ENST00000354547 ELOF1P60002 83 aaKnown RBP12.91□□□□□ -0.34
COL13A1-201ENST00000354547 SCXQ7RTU7 201 aa12.91□□□□□ -0.34
COL13A1-201ENST00000354547 COL6A5A8TX70 2615 aa12.9□□□□□ -0.34
COL13A1-201ENST00000354547 LOC110117498A0A087WWA1 95 aa12.9□□□□□ -0.34
COL13A1-201ENST00000354547 H3BNG1 76 aa12.9□□□□□ -0.34
COL13A1-201ENST00000354547 Q6ZVQ6 151 aa12.89□□□□□ -0.35
COL13A1-201ENST00000354547 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
COL13A1-201ENST00000354547 KRTAP24-1Q3LI83 254 aa12.89□□□□□ -0.35
COL13A1-201ENST00000354547 ATP5EP2Q5VTU8 51 aa12.89□□□□□ -0.35
COL13A1-201ENST00000354547 BAHCC1Q9P281 2608 aa12.89□□□□□ -0.35
COL13A1-201ENST00000354547 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
COL13A1-201ENST00000354547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.88□□□□□ -0.35
COL13A1-201ENST00000354547 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
COL13A1-201ENST00000354547 SYCNQ0VAF6 134 aa12.87□□□□□ -0.35
COL13A1-201ENST00000354547 DEFB105AQ8NG35 78 aa12.87□□□□□ -0.35
COL13A1-201ENST00000354547 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
COL13A1-201ENST00000354547 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.35
COL13A1-201ENST00000354547 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.35
COL13A1-201ENST00000354547 MRAPQ8TCY5 172 aa12.83□□□□□ -0.36
COL13A1-201ENST00000354547 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
COL13A1-201ENST00000354547 RPL37AP8A6NKH3 93 aa12.82□□□□□ -0.36
COL13A1-201ENST00000354547 CASC10Q5T4H9 136 aa12.82□□□□□ -0.36
COL13A1-201ENST00000354547 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms