RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 C3orf84H3BNL1 204 aa8.93□□□□□ -0.98
IFT88-202ENST00000351808 ODF3L2Q3SX64 289 aa8.93□□□□□ -0.98
IFT88-202ENST00000351808 TLN2Q9Y4G6 2542 aa8.93□□□□□ -0.98
IFT88-202ENST00000351808 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
IFT88-202ENST00000351808 RBM12B-AS1Q9P1G2 102 aa8.92□□□□□ -0.98
IFT88-202ENST00000351808 DEFB114Q30KQ6 69 aa8.91□□□□□ -0.98
IFT88-202ENST00000351808 DEFB112Q30KQ8 113 aa8.91□□□□□ -0.98
IFT88-202ENST00000351808 DIRC1Q969H9 104 aa8.91□□□□□ -0.98
IFT88-202ENST00000351808 IGHV4-28A0A0C4DH34 117 aa8.91□□□□□ -0.98
IFT88-202ENST00000351808 HIVEP3Q5T1R4 2406 aa8.9□□□□□ -0.98
IFT88-202ENST00000351808 PSCAO43653 123 aa8.9□□□□□ -0.99
IFT88-202ENST00000351808 UNQ6190/PRO20217Q6UXQ8 127 aa8.9□□□□□ -0.99
IFT88-202ENST00000351808 MYO9AB2RTY4 2548 aa8.89□□□□□ -0.99
IFT88-202ENST00000351808 FN1P02751 2386 aaKnown RBP8.88□□□□□ -0.99
IFT88-202ENST00000351808 IGHV4-30-2A0A087WSY4 118 aa8.88□□□□□ -0.99
IFT88-202ENST00000351808 KTN1-AS1Q86SY8 53 aa8.88□□□□□ -0.99
IFT88-202ENST00000351808 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
IFT88-202ENST00000351808 NBPF19A0A087WUL8 3843 aa8.88□□□□□ -0.99
IFT88-202ENST00000351808 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
IFT88-202ENST00000351808 Q5VV11 94 aa8.87□□□□□ -0.99
IFT88-202ENST00000351808 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
IFT88-202ENST00000351808 A0A096LPF7 62 aa8.87□□□□□ -0.99
IFT88-202ENST00000351808 LCE6AA0A183 80 aa8.87□□□□□ -0.99
IFT88-202ENST00000351808 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
IFT88-202ENST00000351808 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
IFT88-202ENST00000351808 UBE2BP63146 152 aa8.86□□□□□ -0.99
IFT88-202ENST00000351808 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
IFT88-202ENST00000351808 CHD6Q8TD26 2715 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 A0A1B0GUV1 79 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 MSMBP08118 114 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 PIEZO1Q92508 2521 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 CCL24O00175 119 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 XAGE1AQ9HD64 81 aa8.85□□□□□ -0.99
IFT88-202ENST00000351808 C16orf90A8MZG2 172 aa8.84□□□□□ -0.99
IFT88-202ENST00000351808 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
IFT88-202ENST00000351808 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.84□□□□□ -0.99
IFT88-202ENST00000351808 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
IFT88-202ENST00000351808 C4orf48Q5BLP8 95 aa8.84□□□□□ -0.99
IFT88-202ENST00000351808 CELSR2Q9HCU4 2923 aa8.84□□□□□ -0.99
IFT88-202ENST00000351808 CENPEQ02224 2701 aa8.84□□□□□ -1
IFT88-202ENST00000351808 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
IFT88-202ENST00000351808 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
IFT88-202ENST00000351808 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
IFT88-202ENST00000351808 CYP4F30PQ9H0H9 118 aa8.83□□□□□ -1
IFT88-202ENST00000351808 GYPEP15421 78 aa8.83□□□□□ -1
IFT88-202ENST00000351808 ZNF702PQ9H963 129 aa8.83□□□□□ -1
IFT88-202ENST00000351808 M0R378 163 aa8.83□□□□□ -1
IFT88-202ENST00000351808 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
IFT88-202ENST00000351808 APCP25054 2843 aa8.82□□□□□ -1
IFT88-202ENST00000351808 DEFB130BP0DP73 79 aa8.82□□□□□ -1
IFT88-202ENST00000351808 DEFB130AP0DP74 79 aa8.82□□□□□ -1
IFT88-202ENST00000351808 CYSRT1A8MQ03 144 aa8.81□□□□□ -1
IFT88-202ENST00000351808 ETDCA0A1B0GVM5 59 aa8.81□□□□□ -1
IFT88-202ENST00000351808 SPAG11BQ08648 103 aa8.81□□□□□ -1
IFT88-202ENST00000351808 AKAP9Q99996 3911 aa8.81□□□□□ -1
IFT88-202ENST00000351808 FLNCQ14315 2725 aa8.81□□□□□ -1
IFT88-202ENST00000351808 CFAP46Q8IYW2 2715 aa8.81□□□□□ -1
IFT88-202ENST00000351808 ZFYVE26Q68DK2 2539 aa8.81□□□□□ -1
IFT88-202ENST00000351808 PTPN13Q12923 2485 aa8.8□□□□□ -1
IFT88-202ENST00000351808 UTP20O75691 2785 aaKnown RBP8.8□□□□□ -1
IFT88-202ENST00000351808 USP9YO00507 2555 aaPredicted RBP8.8□□□□□ -1
IFT88-202ENST00000351808 LYRM9A8MSI8 78 aa8.8□□□□□ -1
IFT88-202ENST00000351808 ANGP03950 147 aaKnown RBP8.8□□□□□ -1
IFT88-202ENST00000351808 WFDC10AQ9H1F0 79 aa8.8□□□□□ -1
IFT88-202ENST00000351808 UBE2AP49459 152 aa8.79□□□□□ -1
IFT88-202ENST00000351808 PKD1L2Q7Z442 2459 aa8.79□□□□□ -1
IFT88-202ENST00000351808 CACNA1AO00555 2505 aa8.79□□□□□ -1
IFT88-202ENST00000351808 REG3AQ06141 175 aa8.79□□□□□ -1
IFT88-202ENST00000351808 ZANQ9Y493 2812 aa8.78□□□□□ -1
IFT88-202ENST00000351808 HCG22E2RYF7 251 aa8.78□□□□□ -1
IFT88-202ENST00000351808 C11orf45Q8TAV5 145 aa8.78□□□□□ -1
IFT88-202ENST00000351808 SONP18583 2426 aaKnown RBP8.78□□□□□ -1
IFT88-202ENST00000351808 SETXQ7Z333 2677 aaKnown RBP8.77□□□□□ -1.01
IFT88-202ENST00000351808 B4DSR2 109 aa8.77□□□□□ -1.01
IFT88-202ENST00000351808 DEFB105AQ8NG35 78 aa8.77□□□□□ -1.01
IFT88-202ENST00000351808 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
IFT88-202ENST00000351808 MXRA5Q9NR99 2828 aa8.77□□□□□ -1.01
IFT88-202ENST00000351808 MYO18BQ8IUG5 2567 aa8.76□□□□□ -1.01
IFT88-202ENST00000351808 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
IFT88-202ENST00000351808 LCA10Q71F78 164 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
IFT88-202ENST00000351808 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 ESM1Q9NQ30 184 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.01
IFT88-202ENST00000351808 ACACBO00763 2458 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 C4orf3Q8WVX3 66 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 NBEAL2Q6ZNJ1 2754 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 USP9XQ93008 2570 aaPredicted RBP8.75□□□□□ -1.01
IFT88-202ENST00000351808 FBN2P35556 2912 aa8.75□□□□□ -1.01
IFT88-202ENST00000351808 B9D2Q9BPU9 175 aa8.74□□□□□ -1.01
IFT88-202ENST00000351808 KPRPQ5T749 579 aaPredicted RBP8.73□□□□□ -1.01
IFT88-202ENST00000351808 ATP11AUNQ6ZP68 121 aa8.73□□□□□ -1.01
IFT88-202ENST00000351808 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
IFT88-202ENST00000351808 SETD2Q9BYW2 2564 aaPredicted RBP8.73□□□□□ -1.01
IFT88-202ENST00000351808 K7EQZ3 153 aa8.72□□□□□ -1.01
IFT88-202ENST00000351808 NDUFS5O43920 106 aa8.72□□□□□ -1.01
IFT88-202ENST00000351808 DSCR10P59022 87 aa8.72□□□□□ -1.01
IFT88-202ENST00000351808 APOC4P55056 127 aa8.71□□□□□ -1.01
IFT88-202ENST00000351808 LIMD2Q9BT23 127 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms