RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RPL37AP8A6NKH3 93 aa9.2□□□□□ -0.94
PRKN-201ENST00000338468 KRTAP1-4P0C5Y4 121 aa9.2□□□□□ -0.94
PRKN-201ENST00000338468 VPREB1P12018 145 aa9.2□□□□□ -0.94
PRKN-201ENST00000338468 HSPB8Q9UJY1 196 aa9.2□□□□□ -0.94
PRKN-201ENST00000338468 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
PRKN-201ENST00000338468 ZNF861PO60384 105 aa9.18□□□□□ -0.94
PRKN-201ENST00000338468 TSPEAR-AS2P59090 65 aa9.18□□□□□ -0.94
PRKN-201ENST00000338468 NKAPP1Q8N9T2 125 aa9.18□□□□□ -0.94
PRKN-201ENST00000338468 BCE1O60756 84 aa9.17□□□□□ -0.94
PRKN-201ENST00000338468 A0A0U1RRA0 63 aa9.16□□□□□ -0.94
PRKN-201ENST00000338468 PLNP26678 52 aa9.16□□□□□ -0.94
PRKN-201ENST00000338468 LINC00158P58513 81 aa9.16□□□□□ -0.94
PRKN-201ENST00000338468 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
PRKN-201ENST00000338468 DPM2O94777 84 aa9.15□□□□□ -0.94
PRKN-201ENST00000338468 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
PRKN-201ENST00000338468 NDUFA12Q9UI09 145 aa9.15□□□□□ -0.94
PRKN-201ENST00000338468 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
PRKN-201ENST00000338468 IGKV2-28A0A075B6P5 120 aa9.14□□□□□ -0.95
PRKN-201ENST00000338468 LEPROTO15243 131 aa9.14□□□□□ -0.95
PRKN-201ENST00000338468 IGKV2D-28P01615 120 aa9.14□□□□□ -0.95
PRKN-201ENST00000338468 KRTAP13-1Q8IUC0 172 aa9.14□□□□□ -0.95
PRKN-201ENST00000338468 IGKCP01834 107 aa9.13□□□□□ -0.95
PRKN-201ENST00000338468 HERV-K104P63124 156 aa9.13□□□□□ -0.95
PRKN-201ENST00000338468 RPL24P83731 157 aaKnown RBP9.13□□□□□ -0.95
PRKN-201ENST00000338468 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
PRKN-201ENST00000338468 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
PRKN-201ENST00000338468 MYMXA0A1B0GTQ4 84 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 SYS1-DBNDD2H3BUS1 97 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 MEIG1Q5JSS6 88 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 PLEKHB2Q96CS7 222 aa9.11□□□□□ -0.95
PRKN-201ENST00000338468 J3QQQ9 107 aa9.1□□□□□ -0.95
PRKN-201ENST00000338468 COA6Q5JTJ3 125 aaKnown RBP9.1□□□□□ -0.95
PRKN-201ENST00000338468 M0R378 163 aa9.09□□□□□ -0.95
PRKN-201ENST00000338468 TMEM126AQ9H061 195 aa9.09□□□□□ -0.95
PRKN-201ENST00000338468 HERVK_113P61574 105 aa9.08□□□□□ -0.96
PRKN-201ENST00000338468 BOD1L2Q8IYS8 172 aa9.08□□□□□ -0.96
PRKN-201ENST00000338468 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
PRKN-201ENST00000338468 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
PRKN-201ENST00000338468 DAND5Q8N907 189 aa9.07□□□□□ -0.96
PRKN-201ENST00000338468 E9PLD3 99 aa9.06□□□□□ -0.96
PRKN-201ENST00000338468 ATP6V1G1O75348 118 aa9.06□□□□□ -0.96
PRKN-201ENST00000338468 NMUP48645 174 aa9.06□□□□□ -0.96
PRKN-201ENST00000338468 UBE2AP49459 152 aa9.06□□□□□ -0.96
PRKN-201ENST00000338468 PRLHP81277 87 aa9.06□□□□□ -0.96
PRKN-201ENST00000338468 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
PRKN-201ENST00000338468 LGALS3P17931 250 aaKnown RBP9.05□□□□□ -0.96
PRKN-201ENST00000338468 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
PRKN-201ENST00000338468 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
PRKN-201ENST00000338468 A0A087X002 238 aa9.04□□□□□ -0.96
PRKN-201ENST00000338468 NCR3O14931 201 aa9.04□□□□□ -0.96
PRKN-201ENST00000338468 C3orf79P0CE67 100 aa9.04□□□□□ -0.96
PRKN-201ENST00000338468 FAM19A1Q7Z5A9 133 aa9.04□□□□□ -0.96
PRKN-201ENST00000338468 RPL13AP40429 203 aaKnown RBP9.03□□□□□ -0.96
PRKN-201ENST00000338468 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
PRKN-201ENST00000338468 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
PRKN-201ENST00000338468 A0A0J9YXY3 114 aa9.02□□□□□ -0.97
PRKN-201ENST00000338468 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
PRKN-201ENST00000338468 ADAMTSL4-AS1Q5T5F5 129 aa9.01□□□□□ -0.97
PRKN-201ENST00000338468 SOSTDC1Q6X4U4 206 aa9.01□□□□□ -0.97
PRKN-201ENST00000338468 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
PRKN-201ENST00000338468 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
PRKN-201ENST00000338468 SPRR1AP35321 89 aa9□□□□□ -0.97
PRKN-201ENST00000338468 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
PRKN-201ENST00000338468 PRYO14603 147 aa8.99□□□□□ -0.97
PRKN-201ENST00000338468 KRTDAPP60985 99 aa8.99□□□□□ -0.97
PRKN-201ENST00000338468 KRTAP13-2Q52LG2 175 aa8.99□□□□□ -0.97
PRKN-201ENST00000338468 LITAFQ99732 161 aa8.99□□□□□ -0.97
PRKN-201ENST00000338468 CRYGAP11844 174 aa8.98□□□□□ -0.97
PRKN-201ENST00000338468 S100A1P23297 94 aa8.98□□□□□ -0.97
PRKN-201ENST00000338468 TTTY13Q9BZ97 58 aa8.97□□□□□ -0.97
PRKN-201ENST00000338468 LPAP08519 4548 aa8.97□□□□□ -0.97
PRKN-201ENST00000338468 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
PRKN-201ENST00000338468 NPC2P61916 151 aa8.96□□□□□ -0.98
PRKN-201ENST00000338468 FAM229BQ4G0N7 80 aa8.96□□□□□ -0.98
PRKN-201ENST00000338468 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
PRKN-201ENST00000338468 NDUFC2O95298 119 aa8.95□□□□□ -0.98
PRKN-201ENST00000338468 HIGD2AQ9BW72 106 aa8.95□□□□□ -0.98
PRKN-201ENST00000338468 SPANXB1Q9NS25 103 aaPredicted RBP8.95□□□□□ -0.98
PRKN-201ENST00000338468 DDTP30046 118 aa8.94□□□□□ -0.98
PRKN-201ENST00000338468 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
PRKN-201ENST00000338468 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
PRKN-201ENST00000338468 ZNF815PA8K554 130 aa8.93□□□□□ -0.98
PRKN-201ENST00000338468 TIMM17BO60830 172 aa8.93□□□□□ -0.98
PRKN-201ENST00000338468 IGLV6-57P01721 117 aa8.93□□□□□ -0.98
PRKN-201ENST00000338468 ANKRD39Q53RE8 183 aa8.93□□□□□ -0.98
PRKN-201ENST00000338468 ATOH7Q8N100 152 aa8.92□□□□□ -0.98
PRKN-201ENST00000338468 HIST3H2BBQ8N257 126 aa8.92□□□□□ -0.98
PRKN-201ENST00000338468 LINC00308Q8TCZ7 52 aa8.92□□□□□ -0.98
PRKN-201ENST00000338468 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
PRKN-201ENST00000338468 SPRR4Q96PI1 79 aa8.92□□□□□ -0.98
PRKN-201ENST00000338468 ETDCA0A1B0GVM5 59 aa8.91□□□□□ -0.98
PRKN-201ENST00000338468 B5MCH6 92 aa8.91□□□□□ -0.98
PRKN-201ENST00000338468 C20orf202A1L168 122 aa8.9□□□□□ -0.98
PRKN-201ENST00000338468 HIST1H2BLQ99880 126 aa8.9□□□□□ -0.98
PRKN-201ENST00000338468 TSPAN13O95857 204 aa8.89□□□□□ -0.99
PRKN-201ENST00000338468 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
PRKN-201ENST00000338468 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
PRKN-201ENST00000338468 KRTAP9-2Q9BYQ4 174 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms