RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PRR26Q8N8Z3 221 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 MSMPQ1L6U9 139 aa4.27□□□□□ -1.73
CDC42BPA-201ENST00000334218 Q6ZTI0 123 aa4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 SPINK1P00995 79 aa4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 B3GALT5-AS1P59052 145 aa4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 SPATA3Q8NHX4 192 aa4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 EP400Q96L91 3159 aa4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 C1orf147Q96MC9 270 aaPredicted RBP4.26□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGKV1-17P01599 117 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGLV3-1P01715 115 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 LRRK2Q5S007 2527 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 Q5XG85 94 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 TSHBP01222 138 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 NOTCH2Q04721 2471 aa4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 SMCPP49901 116 aaPredicted RBP4.25□□□□□ -1.73
CDC42BPA-201ENST00000334218 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
CDC42BPA-201ENST00000334218 C16orf90A8MZG2 172 aa4.24□□□□□ -1.73
CDC42BPA-201ENST00000334218 C9orf129Q5T035 196 aaKnown RBP4.24□□□□□ -1.73
CDC42BPA-201ENST00000334218 PRR9Q5T870 116 aa4.24□□□□□ -1.73
CDC42BPA-201ENST00000334218 SPINK6Q6UWN8 80 aa4.24□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGFL4Q6B9Z1 124 aa4.23□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGLV1-40P01703 118 aa4.23□□□□□ -1.73
CDC42BPA-201ENST00000334218 C17orf58Q2M2W7 97 aa4.23□□□□□ -1.73
CDC42BPA-201ENST00000334218 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CDC42BPA-201ENST00000334218 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
CDC42BPA-201ENST00000334218 A0A087WSZ3 146 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 FSTL3O95633 263 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 CIRBP-AS1Q8TBR5 109 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGKV2D-30A0A075B6S6 120 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 IGKV2-30P06310 120 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 EPG5Q9HCE0 2579 aa4.22□□□□□ -1.73
CDC42BPA-201ENST00000334218 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.73
CDC42BPA-201ENST00000334218 ZNF581Q9P0T4 197 aa4.21□□□□□ -1.74
CDC42BPA-201ENST00000334218 LELP1Q5T871 98 aa4.21□□□□□ -1.74
CDC42BPA-201ENST00000334218 CSAG1Q6PB30 78 aa4.21□□□□□ -1.74
CDC42BPA-201ENST00000334218 PROK2Q9HC23 129 aa4.21□□□□□ -1.74
CDC42BPA-201ENST00000334218 WDR87Q6ZQQ6 2873 aa4.21□□□□□ -1.74
CDC42BPA-201ENST00000334218 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 Q8NA96 180 aa4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 SPTBN4Q9H254 2564 aa4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 ANKRD17O75179 2603 aaKnown RBP4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 COL4A4P53420 1690 aaPredicted RBP4.2□□□□□ -1.74
CDC42BPA-201ENST00000334218 C10orf142B7Z368 130 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 Q6YL49 198 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC00310P59036 64 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC01006Q8NI28 216 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 APLNQ9ULZ1 77 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
CDC42BPA-201ENST00000334218 LYNX1G3V0Z9 82 aa4.18□□□□□ -1.74
CDC42BPA-201ENST00000334218 IGLV2-23P01705 113 aa4.18□□□□□ -1.74
CDC42BPA-201ENST00000334218 LYNX1P0DP58 116 aa4.18□□□□□ -1.74
CDC42BPA-201ENST00000334218 PSMG3-AS1Q96PY0 264 aa4.18□□□□□ -1.74
CDC42BPA-201ENST00000334218 SETD2Q9BYW2 2564 aaPredicted RBP4.18□□□□□ -1.74
CDC42BPA-201ENST00000334218 A0A1W2PNU3 283 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 COX6A2Q02221 97 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 Q6ZRX8 168 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 BRI3O95415 125 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 ZNF503-AS2A6NEH8 195 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC00242Q5T6M2 205 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC00337Q8N6G1 96 aa4.17□□□□□ -1.74
CDC42BPA-201ENST00000334218 SPINK7P58062 85 aa4.16□□□□□ -1.74
CDC42BPA-201ENST00000334218 LINC00574Q9H8X3 128 aa4.16□□□□□ -1.74
CDC42BPA-201ENST00000334218 KLLNB2CW77 178 aa4.16□□□□□ -1.74
CDC42BPA-201ENST00000334218 IGLV2-11P01706 119 aa4.16□□□□□ -1.74
CDC42BPA-201ENST00000334218 BBC3Q96PG8 261 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-201ENST00000334218 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-201ENST00000334218 Q8N9P0 234 aaPredicted RBP4.15□□□□□ -1.75
CDC42BPA-201ENST00000334218 ROMO1P60602 79 aa4.14□□□□□ -1.75
CDC42BPA-201ENST00000334218 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
CDC42BPA-201ENST00000334218 IGF2RP11717 2491 aa4.14□□□□□ -1.75
CDC42BPA-201ENST00000334218 Q5VV11 94 aa4.14□□□□□ -1.75
CDC42BPA-201ENST00000334218 A0A096LPF7 62 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 ODF3L2Q3SX64 289 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 CRIP1P50238 77 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 MTORP42345 2549 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 MUC22E2RYF6 1773 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 COX6B2Q6YFQ2 88 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 A0A1B0GU33 70 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 FP248Q71RG6 208 aaPredicted RBP4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 OBSCN-AS1Q96MR7 158 aa4.13□□□□□ -1.75
CDC42BPA-201ENST00000334218 A0A096LNI7 61 aa4.12□□□□□ -1.75
CDC42BPA-201ENST00000334218 Q8NAQ8 132 aa4.12□□□□□ -1.75
CDC42BPA-201ENST00000334218 ANKRD11Q6UB99 2663 aaPredicted RBP4.12□□□□□ -1.75
CDC42BPA-201ENST00000334218 G3V318 75 aa4.11□□□□□ -1.75
CDC42BPA-201ENST00000334218 DNAH10OSP0CZ25 163 aa4.11□□□□□ -1.75
CDC42BPA-201ENST00000334218 LYPD2Q6UXB3 125 aa4.11□□□□□ -1.75
CDC42BPA-201ENST00000334218 C11orf21Q9P2W6 132 aa4.11□□□□□ -1.75
CDC42BPA-201ENST00000334218 URB1-AS1Q96HZ7 61 aa4.1□□□□□ -1.75
CDC42BPA-201ENST00000334218 K7EQG2 157 aa4.1□□□□□ -1.75
CDC42BPA-201ENST00000334218 USP9YO00507 2555 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-201ENST00000334218 LINC00167Q96N53 147 aa4.1□□□□□ -1.75
CDC42BPA-201ENST00000334218 IGLV2-14P01704 120 aa4.09□□□□□ -1.75
CDC42BPA-201ENST00000334218 FHL3Q13643 280 aa4.09□□□□□ -1.75
CDC42BPA-201ENST00000334218 MAPK1IP1LQ8NDC0 245 aa4.09□□□□□ -1.75
CDC42BPA-201ENST00000334218 SLURP1P55000 103 aa4.09□□□□□ -1.76
CDC42BPA-201ENST00000334218 LY6G6CO95867 125 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms