RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 Q8N814 137 aa11.74□□□□□ -0.53
SYNE4-201ENST00000324444 SND1-IT1Q9HBX3 110 aa11.74□□□□□ -0.53
SYNE4-201ENST00000324444 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
SYNE4-201ENST00000324444 LOC107984640A0A0U1RRK4 108 aa11.73□□□□□ -0.53
SYNE4-201ENST00000324444 NPC2P61916 151 aa11.73□□□□□ -0.53
SYNE4-201ENST00000324444 TNP2Q05952 138 aa11.73□□□□□ -0.53
SYNE4-201ENST00000324444 WFDC2Q14508 124 aa11.73□□□□□ -0.53
SYNE4-201ENST00000324444 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
SYNE4-201ENST00000324444 A0A1B0GWB2 263 aa11.72□□□□□ -0.53
SYNE4-201ENST00000324444 NDUFC2O95298 119 aa11.72□□□□□ -0.53
SYNE4-201ENST00000324444 RAB37Q96AX2 223 aa11.72□□□□□ -0.53
SYNE4-201ENST00000324444 SLPIP03973 132 aa11.71□□□□□ -0.53
SYNE4-201ENST00000324444 SOSTDC1Q6X4U4 206 aa11.69□□□□□ -0.54
SYNE4-201ENST00000324444 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
SYNE4-201ENST00000324444 TRAV13-2A0A0B4J235 113 aa11.68□□□□□ -0.54
SYNE4-201ENST00000324444 CFC1BP0CG36 223 aa11.68□□□□□ -0.54
SYNE4-201ENST00000324444 CFC1P0CG37 223 aa11.68□□□□□ -0.54
SYNE4-201ENST00000324444 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
SYNE4-201ENST00000324444 C9orf163Q8N9P6 203 aa11.68□□□□□ -0.54
SYNE4-201ENST00000324444 PRO1854Q9UHT4 67 aa11.68□□□□□ -0.54
SYNE4-201ENST00000324444 KRTAP17-1Q9BYP8 105 aa11.67□□□□□ -0.54
SYNE4-201ENST00000324444 Q6ZRP5 223 aa11.67□□□□□ -0.54
SYNE4-201ENST00000324444 GAGE2EQ4V326 116 aa11.66□□□□□ -0.54
SYNE4-201ENST00000324444 GAGE2DQ9UEU5 116 aa11.66□□□□□ -0.54
SYNE4-201ENST00000324444 LINC00474Q9P2X8 69 aa11.65□□□□□ -0.55
SYNE4-201ENST00000324444 TRBV10-2A0A0K0K1G8 114 aa11.64□□□□□ -0.55
SYNE4-201ENST00000324444 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
SYNE4-201ENST00000324444 EIF4EBP3O60516 100 aaPredicted RBP11.64□□□□□ -0.55
SYNE4-201ENST00000324444 XAGE1AQ9HD64 81 aa11.64□□□□□ -0.55
SYNE4-201ENST00000324444 PLA2G2DQ9UNK4 145 aa11.64□□□□□ -0.55
SYNE4-201ENST00000324444 CBY1Q9Y3M2 126 aa11.64□□□□□ -0.55
SYNE4-201ENST00000324444 GAGE2BQ13066 116 aa11.62□□□□□ -0.55
SYNE4-201ENST00000324444 RYR1P21817 5038 aa11.62□□□□□ -0.55
SYNE4-201ENST00000324444 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
SYNE4-201ENST00000324444 C9orf118A6NHY6 69 aa11.6□□□□□ -0.55
SYNE4-201ENST00000324444 K7ERJ3 54 aa11.6□□□□□ -0.55
SYNE4-201ENST00000324444 TAX1BP3O14907 124 aa11.6□□□□□ -0.55
SYNE4-201ENST00000324444 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
SYNE4-201ENST00000324444 PGPEP1Q9NXJ5 209 aa11.6□□□□□ -0.55
SYNE4-201ENST00000324444 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
SYNE4-201ENST00000324444 Q1RN00 199 aa11.59□□□□□ -0.55
SYNE4-201ENST00000324444 LYRM7Q5U5X0 104 aa11.59□□□□□ -0.55
SYNE4-201ENST00000324444 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
SYNE4-201ENST00000324444 RPL13AP40429 203 aaKnown RBP11.58□□□□□ -0.56
SYNE4-201ENST00000324444 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 M0R378 163 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 S100A7L2Q5SY68 101 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
SYNE4-201ENST00000324444 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 OR13C6PQ8NH95 151 aa11.57□□□□□ -0.56
SYNE4-201ENST00000324444 DNAH5Q8TE73 4624 aa11.56□□□□□ -0.56
SYNE4-201ENST00000324444 COX6CP09669 75 aa11.56□□□□□ -0.56
SYNE4-201ENST00000324444 VPREB1P12018 145 aa11.56□□□□□ -0.56
SYNE4-201ENST00000324444 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
SYNE4-201ENST00000324444 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
SYNE4-201ENST00000324444 HSPG2P98160 4391 aa11.55□□□□□ -0.56
SYNE4-201ENST00000324444 TSPAN13O95857 204 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 KRTAP10-2P60368 255 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 LINC00337Q8N6G1 96 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 A0A096LNI7 61 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 H3BUT2 72 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 PSMB2P49721 201 aa11.54□□□□□ -0.56
SYNE4-201ENST00000324444 H7C2G1 150 aa11.53□□□□□ -0.56
SYNE4-201ENST00000324444 NCR3O14931 201 aa11.53□□□□□ -0.56
SYNE4-201ENST00000324444 IGKV2-24A0A0C4DH68 120 aa11.52□□□□□ -0.57
SYNE4-201ENST00000324444 CDK2AP2O75956 126 aa11.52□□□□□ -0.57
SYNE4-201ENST00000324444 FABP2P12104 132 aa11.52□□□□□ -0.57
SYNE4-201ENST00000324444 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
SYNE4-201ENST00000324444 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
SYNE4-201ENST00000324444 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
SYNE4-201ENST00000324444 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
SYNE4-201ENST00000324444 PRR3P79522 188 aaKnown RBP11.5□□□□□ -0.57
SYNE4-201ENST00000324444 DPH3Q96FX2 82 aa11.5□□□□□ -0.57
SYNE4-201ENST00000324444 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
SYNE4-201ENST00000324444 Q8NDZ9 215 aa11.49□□□□□ -0.57
SYNE4-201ENST00000324444 APOBP04114 4563 aaKnown RBP11.49□□□□□ -0.57
SYNE4-201ENST00000324444 VAMP3Q15836 100 aa11.48□□□□□ -0.57
SYNE4-201ENST00000324444 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
SYNE4-201ENST00000324444 KRTAP4-5Q9BYR2 181 aa11.48□□□□□ -0.57
SYNE4-201ENST00000324444 TRBV20-1A0A075B6N2 111 aa11.47□□□□□ -0.57
SYNE4-201ENST00000324444 FAM19A5Q7Z5A7 132 aaPredicted RBP11.47□□□□□ -0.57
SYNE4-201ENST00000324444 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
SYNE4-201ENST00000324444 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
SYNE4-201ENST00000324444 H0YGX0 51 aa11.46□□□□□ -0.57
SYNE4-201ENST00000324444 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.57
SYNE4-201ENST00000324444 SMIM11BQ8TCY0 68 aa11.46□□□□□ -0.57
SYNE4-201ENST00000324444 SPACA4Q8TDM5 124 aa11.46□□□□□ -0.57
SYNE4-201ENST00000324444 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
SYNE4-201ENST00000324444 GTF2H5Q6ZYL4 71 aa11.45□□□□□ -0.58
SYNE4-201ENST00000324444 TRAV23DV6A0A075B6W5 121 aa11.44□□□□□ -0.58
SYNE4-201ENST00000324444 M0QXV9 152 aa11.44□□□□□ -0.58
SYNE4-201ENST00000324444 TRIAP1O43715 76 aa11.44□□□□□ -0.58
SYNE4-201ENST00000324444 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
SYNE4-201ENST00000324444 FAM168BA1KXE4 195 aa11.43□□□□□ -0.58
SYNE4-201ENST00000324444 SNCGO76070 127 aa11.43□□□□□ -0.58
SYNE4-201ENST00000324444 C7orf33Q8WU49 177 aa11.43□□□□□ -0.58
SYNE4-201ENST00000324444 NAA38Q9BRA0 125 aaKnown RBP11.43□□□□□ -0.58
SYNE4-201ENST00000324444 DNAH8Q96JB1 4490 aa11.43□□□□□ -0.58
SYNE4-201ENST00000324444 CHTF8P0CG12 524 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms