RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 NOTCH1P46531 2555 aa11.78□□□□□ -0.52
COL9A1-201ENST00000320755 IMUPQ9GZP8 106 aa11.78□□□□□ -0.52
COL9A1-201ENST00000320755 TENM3Q9P273 2699 aa11.78□□□□□ -0.52
COL9A1-201ENST00000320755 NDUFC2O95298 119 aa11.78□□□□□ -0.52
COL9A1-201ENST00000320755 LYPD5Q6UWN5 251 aa11.77□□□□□ -0.53
COL9A1-201ENST00000320755 OBSCN-AS1Q96MR7 158 aa11.76□□□□□ -0.53
COL9A1-201ENST00000320755 MAST4O15021 2626 aa11.76□□□□□ -0.53
COL9A1-201ENST00000320755 HIGD2BQ4VC39 106 aa11.75□□□□□ -0.53
COL9A1-201ENST00000320755 WFDC10BQ8IUB3 73 aa11.75□□□□□ -0.53
COL9A1-201ENST00000320755 SVIPQ8NHG7 77 aa11.74□□□□□ -0.53
COL9A1-201ENST00000320755 WFDC9Q8NEX5 89 aa11.73□□□□□ -0.53
COL9A1-201ENST00000320755 PRR34Q9NV39 138 aa11.73□□□□□ -0.53
COL9A1-201ENST00000320755 A0A087WVE0 104 aa11.72□□□□□ -0.53
COL9A1-201ENST00000320755 TMEM256-PLSCR3K7ERE1 68 aa11.72□□□□□ -0.53
COL9A1-201ENST00000320755 KPRPQ5T749 579 aaPredicted RBP11.72□□□□□ -0.53
COL9A1-201ENST00000320755 Q6ZTC4 211 aa11.71□□□□□ -0.53
COL9A1-201ENST00000320755 C6orf48Q9UBA6 75 aa11.71□□□□□ -0.53
COL9A1-201ENST00000320755 CCKP06307 115 aa11.7□□□□□ -0.54
COL9A1-201ENST00000320755 A0A0J9YWU9 116 aa11.69□□□□□ -0.54
COL9A1-201ENST00000320755 LINC00575Q6W349 94 aa11.69□□□□□ -0.54
COL9A1-201ENST00000320755 ZNF561-AS1K7EIQ3 104 aa11.69□□□□□ -0.54
COL9A1-201ENST00000320755 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 hADV29S1A0JD25 119 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 KRTAP10-11P60412 298 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 LINC00167Q96N53 147 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 HIST1H4AP62805 103 aaKnown RBP11.68□□□□□ -0.54
COL9A1-201ENST00000320755 JMJD7-PLA2G4BH0Y9G9 81 aa11.68□□□□□ -0.54
COL9A1-201ENST00000320755 A0A1B0GX51 115 aa11.67□□□□□ -0.54
COL9A1-201ENST00000320755 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
COL9A1-201ENST00000320755 FBN1P35555 2871 aaKnown RBP11.67□□□□□ -0.54
COL9A1-201ENST00000320755 C9orf153Q5TBE3 101 aa11.66□□□□□ -0.54
COL9A1-201ENST00000320755 Q6ZQY7 126 aa11.65□□□□□ -0.54
COL9A1-201ENST00000320755 Q6JHZ5 121 aa11.64□□□□□ -0.55
COL9A1-201ENST00000320755 IGLV6-57P01721 117 aa11.64□□□□□ -0.55
COL9A1-201ENST00000320755 ESRGQ1W209 222 aa11.63□□□□□ -0.55
COL9A1-201ENST00000320755 C3orf22Q8N5N4 141 aa11.63□□□□□ -0.55
COL9A1-201ENST00000320755 RBM3P98179 157 aaKnown RBP11.62□□□□□ -0.55
COL9A1-201ENST00000320755 TRAV23DV6A0A075B6W5 121 aa11.61□□□□□ -0.55
COL9A1-201ENST00000320755 Q6ZRU5 148 aa11.61□□□□□ -0.55
COL9A1-201ENST00000320755 WIPF1O43516 503 aa11.61□□□□□ -0.55
COL9A1-201ENST00000320755 SMIM20Q8N5G0 67 aa11.61□□□□□ -0.55
COL9A1-201ENST00000320755 IGKV2D-24A0A075B6R9 120 aa11.6□□□□□ -0.55
COL9A1-201ENST00000320755 UQCRQO14949 82 aa11.6□□□□□ -0.55
COL9A1-201ENST00000320755 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
COL9A1-201ENST00000320755 COL6A5A8TX70 2615 aa11.6□□□□□ -0.55
COL9A1-201ENST00000320755 M0R2N4 97 aa11.59□□□□□ -0.55
COL9A1-201ENST00000320755 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.55
COL9A1-201ENST00000320755 ANK2Q01484 3957 aa11.58□□□□□ -0.56
COL9A1-201ENST00000320755 ATOX1O00244 68 aa11.58□□□□□ -0.56
COL9A1-201ENST00000320755 ZNF73O43830 326 aaPredicted RBP11.58□□□□□ -0.56
COL9A1-201ENST00000320755 FAM19A1Q7Z5A9 133 aa11.58□□□□□ -0.56
COL9A1-201ENST00000320755 C1orf43Q9BWL3 253 aa11.58□□□□□ -0.56
COL9A1-201ENST00000320755 DEFB131BA0A096LNP1 70 aa11.57□□□□□ -0.56
COL9A1-201ENST00000320755 MUC7Q8TAX7 377 aa11.57□□□□□ -0.56
COL9A1-201ENST00000320755 COX7CP15954 63 aa11.56□□□□□ -0.56
COL9A1-201ENST00000320755 UBL5Q9BZL1 73 aa11.56□□□□□ -0.56
COL9A1-201ENST00000320755 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
COL9A1-201ENST00000320755 C15orf56Q8N910 161 aa11.56□□□□□ -0.56
COL9A1-201ENST00000320755 KRTAP26-1Q6PEX3 210 aa11.56□□□□□ -0.56
COL9A1-201ENST00000320755 NBEAL1Q6ZS30 2694 aa11.55□□□□□ -0.56
COL9A1-201ENST00000320755 PRB2P02812 416 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-201ENST00000320755 COX7BP24311 80 aa11.55□□□□□ -0.56
COL9A1-201ENST00000320755 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
COL9A1-201ENST00000320755 DSCR8Q96T75 97 aa11.55□□□□□ -0.56
COL9A1-201ENST00000320755 Q6ZQT0 140 aa11.54□□□□□ -0.56
COL9A1-201ENST00000320755 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
COL9A1-201ENST00000320755 VPREB1P12018 145 aa11.54□□□□□ -0.56
COL9A1-201ENST00000320755 KRTAP24-1Q3LI83 254 aa11.54□□□□□ -0.56
COL9A1-201ENST00000320755 HAMPP81172 84 aa11.53□□□□□ -0.56
COL9A1-201ENST00000320755 EGFEM1PQ0D2K5 195 aa11.53□□□□□ -0.56
COL9A1-201ENST00000320755 H3BNG1 76 aa11.51□□□□□ -0.57
COL9A1-201ENST00000320755 Q6ZRP5 223 aa11.51□□□□□ -0.57
COL9A1-201ENST00000320755 NDUFC2-KCTD14E9PQ53 114 aa11.51□□□□□ -0.57
COL9A1-201ENST00000320755 BAHCC1Q9P281 2608 aa11.5□□□□□ -0.57
COL9A1-201ENST00000320755 CYSTM1Q9H1C7 97 aa11.5□□□□□ -0.57
COL9A1-201ENST00000320755 M0R378 163 aa11.49□□□□□ -0.57
COL9A1-201ENST00000320755 UPK3BQ9BT76 320 aa11.48□□□□□ -0.57
COL9A1-201ENST00000320755 ELOF1P60002 83 aaKnown RBP11.48□□□□□ -0.57
COL9A1-201ENST00000320755 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
COL9A1-201ENST00000320755 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
COL9A1-201ENST00000320755 MRAPQ8TCY5 172 aa11.46□□□□□ -0.57
COL9A1-201ENST00000320755 LOC110117498A0A087WWA1 95 aa11.46□□□□□ -0.57
COL9A1-201ENST00000320755 GHRHP01286 108 aa11.46□□□□□ -0.58
COL9A1-201ENST00000320755 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.58
COL9A1-201ENST00000320755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.45□□□□□ -0.58
COL9A1-201ENST00000320755 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
COL9A1-201ENST00000320755 MGAM2Q2M2H8 2515 aa11.45□□□□□ -0.58
COL9A1-201ENST00000320755 ATP5EP2Q5VTU8 51 aa11.44□□□□□ -0.58
COL9A1-201ENST00000320755 Q6ZVQ6 151 aa11.44□□□□□ -0.58
COL9A1-201ENST00000320755 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
COL9A1-201ENST00000320755 CRYGAP11844 174 aa11.43□□□□□ -0.58
COL9A1-201ENST00000320755 LINC01547P58512 204 aaPredicted RBP11.43□□□□□ -0.58
COL9A1-201ENST00000320755 NKAPP1Q8N9T2 125 aa11.43□□□□□ -0.58
COL9A1-201ENST00000320755 SERTAD4-AS1Q5TG53 156 aa11.42□□□□□ -0.58
COL9A1-201ENST00000320755 CASC10Q5T4H9 136 aa11.41□□□□□ -0.58
COL9A1-201ENST00000320755 RPL37AP8A6NKH3 93 aa11.41□□□□□ -0.58
COL9A1-201ENST00000320755 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
COL9A1-201ENST00000320755 PDE6GP18545 87 aa11.38□□□□□ -0.59
COL9A1-201ENST00000320755 FAM168BA1KXE4 195 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms