RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 TRAV13-2A0A0B4J235 113 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 NDUFC2O95298 119 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 CFC1BP0CG36 223 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 CFC1P0CG37 223 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 LYRM7Q5U5X0 104 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 DNAH17Q9UFH2 4485 aa10.05□□□□□ -0.8
HNF4A-202ENST00000316673 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
HNF4A-202ENST00000316673 C9orf116Q5BN46 136 aaPredicted RBP10.04□□□□□ -0.8
HNF4A-202ENST00000316673 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
HNF4A-202ENST00000316673 TAX1BP3O14907 124 aa10.04□□□□□ -0.8
HNF4A-202ENST00000316673 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
HNF4A-202ENST00000316673 IGLV5-52A0A0A0MRZ9 124 aa10.03□□□□□ -0.8
HNF4A-202ENST00000316673 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.02□□□□□ -0.81
HNF4A-202ENST00000316673 LOC107984640A0A0U1RRK4 108 aa10.02□□□□□ -0.81
HNF4A-202ENST00000316673 K7ERJ3 54 aa10.02□□□□□ -0.81
HNF4A-202ENST00000316673 Q1RN00 199 aa10.02□□□□□ -0.81
HNF4A-202ENST00000316673 SOSTDC1Q6X4U4 206 aa10.02□□□□□ -0.81
HNF4A-202ENST00000316673 KRTAP10-2P60368 255 aa10.01□□□□□ -0.81
HNF4A-202ENST00000316673 FAT2Q9NYQ8 4349 aa10.01□□□□□ -0.81
HNF4A-202ENST00000316673 HERC2O95714 4834 aa10□□□□□ -0.81
HNF4A-202ENST00000316673 CBY1Q9Y3M2 126 aa10□□□□□ -0.81
HNF4A-202ENST00000316673 FABP2P12104 132 aa9.99□□□□□ -0.81
HNF4A-202ENST00000316673 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
HNF4A-202ENST00000316673 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
HNF4A-202ENST00000316673 COX6CP09669 75 aa9.98□□□□□ -0.81
HNF4A-202ENST00000316673 H3BUT2 72 aa9.98□□□□□ -0.81
HNF4A-202ENST00000316673 RPL13AP40429 203 aaKnown RBP9.98□□□□□ -0.81
HNF4A-202ENST00000316673 PSMB2P49721 201 aa9.98□□□□□ -0.81
HNF4A-202ENST00000316673 HECTD4Q9Y4D8 3996 aa9.97□□□□□ -0.81
HNF4A-202ENST00000316673 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
HNF4A-202ENST00000316673 GAGE2EQ4V326 116 aa9.97□□□□□ -0.81
HNF4A-202ENST00000316673 C9orf163Q8N9P6 203 aa9.97□□□□□ -0.81
HNF4A-202ENST00000316673 GAGE2DQ9UEU5 116 aa9.97□□□□□ -0.81
HNF4A-202ENST00000316673 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.81
HNF4A-202ENST00000316673 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
HNF4A-202ENST00000316673 TSPAN13O95857 204 aa9.96□□□□□ -0.82
HNF4A-202ENST00000316673 SLPIP03973 132 aa9.96□□□□□ -0.82
HNF4A-202ENST00000316673 VAMP3Q15836 100 aa9.96□□□□□ -0.82
HNF4A-202ENST00000316673 OR13C6PQ8NH95 151 aa9.96□□□□□ -0.82
HNF4A-202ENST00000316673 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
HNF4A-202ENST00000316673 A0A1W2PPM0 123 aa9.95□□□□□ -0.82
HNF4A-202ENST00000316673 S100A7L2Q5SY68 101 aa9.95□□□□□ -0.82
HNF4A-202ENST00000316673 Q6ZRP5 223 aa9.95□□□□□ -0.82
HNF4A-202ENST00000316673 GTF2H5Q6ZYL4 71 aa9.95□□□□□ -0.82
HNF4A-202ENST00000316673 XAGE1AQ9HD64 81 aa9.95□□□□□ -0.82
HNF4A-202ENST00000316673 H7C2G1 150 aa9.94□□□□□ -0.82
HNF4A-202ENST00000316673 SCGB1C2P0DMR2 95 aa9.94□□□□□ -0.82
HNF4A-202ENST00000316673 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
HNF4A-202ENST00000316673 PKD1P98161 4303 aa9.94□□□□□ -0.82
HNF4A-202ENST00000316673 A0A1B0GV90 55 aa9.93□□□□□ -0.82
HNF4A-202ENST00000316673 PLA2G2DQ9UNK4 145 aa9.93□□□□□ -0.82
HNF4A-202ENST00000316673 IGKV2-28A0A075B6P5 120 aa9.92□□□□□ -0.82
HNF4A-202ENST00000316673 IGKV2D-28P01615 120 aa9.92□□□□□ -0.82
HNF4A-202ENST00000316673 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
HNF4A-202ENST00000316673 NKAPP1Q8N9T2 125 aa9.92□□□□□ -0.82
HNF4A-202ENST00000316673 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
HNF4A-202ENST00000316673 FUSP35637 526 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■■■□□ 14.7
HNF4A-202ENST00000316673 LINC00337Q8N6G1 96 aa9.91□□□□□ -0.82
HNF4A-202ENST00000316673 M0R378 163 aa9.91□□□□□ -0.82
HNF4A-202ENST00000316673 GAGE10A6NGK3 116 aa9.9□□□□□ -0.83
HNF4A-202ENST00000316673 NCR3O14931 201 aa9.9□□□□□ -0.83
HNF4A-202ENST00000316673 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
HNF4A-202ENST00000316673 SPCS1Q9Y6A9 102 aa9.89□□□□□ -0.83
HNF4A-202ENST00000316673 VPREB1P12018 145 aa9.88□□□□□ -0.83
HNF4A-202ENST00000316673 RPL28P46779 137 aaKnown RBP9.88□□□□□ -0.83
HNF4A-202ENST00000316673 NAA38Q9BRA0 125 aaKnown RBP9.88□□□□□ -0.83
HNF4A-202ENST00000316673 DNAH11Q96DT5 4516 aa9.88□□□□□ -0.83
HNF4A-202ENST00000316673 PKHD1P08F94 4074 aa9.87□□□□□ -0.83
HNF4A-202ENST00000316673 SNCGO76070 127 aa9.87□□□□□ -0.83
HNF4A-202ENST00000316673 KRTAP10-1P60331 282 aa9.87□□□□□ -0.83
HNF4A-202ENST00000316673 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
HNF4A-202ENST00000316673 C9orf129Q5T035 196 aaKnown RBP9.87□□□□□ -0.83
HNF4A-202ENST00000316673 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
HNF4A-202ENST00000316673 H0YGX0 51 aa9.86□□□□□ -0.83
HNF4A-202ENST00000316673 K7EP34 96 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 TRIAP1O43715 76 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
HNF4A-202ENST00000316673 ATXN8Q156A1 80 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 Q6ZSA8 131 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 SMIM11BQ8TCY0 68 aa9.85□□□□□ -0.83
HNF4A-202ENST00000316673 IGKV2-24A0A0C4DH68 120 aa9.84□□□□□ -0.83
HNF4A-202ENST00000316673 UBE2V1Q13404 147 aa9.84□□□□□ -0.83
HNF4A-202ENST00000316673 A0A096LNI7 61 aa9.83□□□□□ -0.84
HNF4A-202ENST00000316673 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
HNF4A-202ENST00000316673 KIAA1109Q2LD37 5005 aa9.83□□□□□ -0.84
HNF4A-202ENST00000316673 TRAV23DV6A0A075B6W5 121 aa9.82□□□□□ -0.84
HNF4A-202ENST00000316673 TRBV10-3A0A0K0K1G6 114 aa9.81□□□□□ -0.84
HNF4A-202ENST00000316673 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
HNF4A-202ENST00000316673 FAM19A5Q7Z5A7 132 aaPredicted RBP9.8□□□□□ -0.84
HNF4A-202ENST00000316673 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
HNF4A-202ENST00000316673 Q8NDZ9 215 aa9.8□□□□□ -0.84
HNF4A-202ENST00000316673 DIRC1Q969H9 104 aa9.8□□□□□ -0.84
HNF4A-202ENST00000316673 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 RYR1P21817 5038 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 TRBV7-6A0A0J9YX20 115 aa9.79□□□□□ -0.84
HNF4A-202ENST00000316673 FAM30AQ9NZY2 134 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms