RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 ZNF563Q8TA94 476 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 ZNF625Q96I27 306 aaPredicted RBP1.65□□□□□ -2.15
C11orf40-201ENST00000307616 LINC00208Q96KT6 92 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 FXYD6Q9H0Q3 95 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 R4GMQ9 66 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 V9GYV3 84 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 ARFGEF3Q5TH69 2177 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 MED12Q93074 2177 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 BDP1A6H8Y1 2624 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 TRIOO75962 3097 aa1.65□□□□□ -2.15
C11orf40-201ENST00000307616 TET1Q8NFU7 2136 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 PRUNE2Q8WUY3 3088 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 IGKV2-40A0A087WW87 121 aaPredicted RBP1.64□□□□□ -2.15
C11orf40-201ENST00000307616 CTXND1A0A1B0GTU2 59 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 M0R135 149 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 IGKV2D-40P01614 121 aaPredicted RBP1.64□□□□□ -2.15
C11orf40-201ENST00000307616 F5P12259 2224 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 PI4KAP42356 2102 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 DMDP11532 3685 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 ABCA4P78363 2273 aa1.64□□□□□ -2.15
C11orf40-201ENST00000307616 DNAH14Q0VDD8 3507 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 TNRC6BQ9UPQ9 1833 aaKnown RBP1.63□□□□□ -2.15
C11orf40-201ENST00000307616 USP34Q70CQ2 3546 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 C5orf42Q9H799 3197 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 D6R8Y8 96 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 INE1O15225 51 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 GCHFRP30047 84 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 DEFB121Q5J5C9 76 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 MUSTN1Q8IVN3 82 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 PRO3102Q9H379 93 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 CMC2Q9NRP2 79 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 FREM1Q5H8C1 2179 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 PDE4DIPQ5VU43 2346 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 CFAP54Q96N23 3096 aa1.63□□□□□ -2.15
C11orf40-201ENST00000307616 SPEGQ15772 3267 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 CEP295Q9C0D2 2601 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 TRGV2A0A075B6R0 118 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 SPTY2D1-AS1A0A0U1RR47 76 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 Q6JHZ5 121 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 MYO7BQ6PIF6 2116 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 Q86TA4 180 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 BAGE2Q86Y30 109 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 AMELXQ99217 191 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 SNURFQ9Y675 71 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 FRYLO94915 3013 aa1.62□□□□□ -2.15
C11orf40-201ENST00000307616 LOC110117498A0A087WWA1 95 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 TRGV1A0A0A0MS02 117 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 TRAV1-2A0A0B4J238 106 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 H0YGG7 62 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 H3BVH4 76 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 STATHP02808 62 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 C3orf79P0CE67 100 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 COX8AP10176 69 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 ZNF137PP52743 207 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 LINC01590Q5TEZ4 76 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 Q96NJ1 140 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 ALPK2Q86TB3 2170 aa1.61□□□□□ -2.15
C11orf40-201ENST00000307616 FN1P02751 2386 aaKnown RBP1.61□□□□□ -2.15
C11orf40-201ENST00000307616 MYO7AQ13402 2215 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 NCOA6Q14686 2063 aaPredicted RBP1.6□□□□□ -2.15
C11orf40-201ENST00000307616 FREM2Q5SZK8 3169 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 CPSF4LA6NMK7 179 aaKnown RBP1.6□□□□□ -2.15
C11orf40-201ENST00000307616 M0R2N4 97 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 UQCR11O14957 56 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 PIN1P1O15428 100 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 BAGE3Q86Y29 109 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 TOMM5Q8N4H5 51 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 SMIM4Q8WVI0 70 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 OBSCN-AS1Q96MR7 158 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 U3KQA8 63 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 CACNA1HO95180 2353 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 VPS13AQ96RL7 3174 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 LAMA1P25391 3075 aa1.6□□□□□ -2.15
C11orf40-201ENST00000307616 CAV3P56539 151 aa1.59□□□□□ -2.15
C11orf40-201ENST00000307616 FAM103A1Q9BTL3 118 aaKnown RBP1.59□□□□□ -2.15
C11orf40-201ENST00000307616 SPENQ96T58 3664 aaKnown RBP1.59□□□□□ -2.16
C11orf40-201ENST00000307616 ZDBF2Q9HCK1 2354 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 NCOR1O75376 2440 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 GVINP1Q7Z2Y8 2422 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 WDFY3Q8IZQ1 3526 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 MGPP08493 103 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 ACYP2P14621 99 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 IFI27P40305 119 aaPredicted RBP1.58□□□□□ -2.16
C11orf40-201ENST00000307616 DEFB110Q30KQ9 67 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 KRTAP21-3Q3LHN1 58 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 GDF5OSQ5U4N7 250 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 CCL19Q99731 98 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 GNG13Q9P2W3 67 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 COL6A3P12111 3177 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 TNRC18O15417 2968 aaPredicted RBP1.58□□□□□ -2.16
C11orf40-201ENST00000307616 RTTNQ86VV8 2226 aa1.58□□□□□ -2.16
C11orf40-201ENST00000307616 WDFY4Q6ZS81 3184 aa1.57□□□□□ -2.16
C11orf40-201ENST00000307616 ASPMQ8IZT6 3477 aa1.57□□□□□ -2.16
C11orf40-201ENST00000307616 ZNF292O60281 2723 aa1.57□□□□□ -2.16
C11orf40-201ENST00000307616 SPINK7P58062 85 aa1.57□□□□□ -2.16
C11orf40-201ENST00000307616 ABRACLQ9P1F3 81 aa1.57□□□□□ -2.16
C11orf40-201ENST00000307616 CELSR3Q9NYQ7 3312 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms