RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 IGKV2D-28P01615 120 aa11.4□□□□□ -0.58
KRT28-201ENST00000306658 RPL13AP40429 203 aaKnown RBP11.4□□□□□ -0.58
KRT28-201ENST00000306658 Q6ZRP5 223 aa11.4□□□□□ -0.58
KRT28-201ENST00000306658 XAGE1AQ9HD64 81 aa11.4□□□□□ -0.58
KRT28-201ENST00000306658 FABP2P12104 132 aa11.4□□□□□ -0.59
KRT28-201ENST00000306658 VAMP3Q15836 100 aa11.4□□□□□ -0.59
KRT28-201ENST00000306658 GAGE2EQ4V326 116 aa11.4□□□□□ -0.59
KRT28-201ENST00000306658 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.59
KRT28-201ENST00000306658 ALMS1Q8TCU4 4167 aa11.39□□□□□ -0.59
KRT28-201ENST00000306658 RPL18AQ02543 176 aaKnown RBP11.38□□□□□ -0.59
KRT28-201ENST00000306658 KMT2AQ03164 3969 aa11.38□□□□□ -0.59
KRT28-201ENST00000306658 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.37□□□□□ -0.59
KRT28-201ENST00000306658 LOC107984640A0A0U1RRK4 108 aa11.37□□□□□ -0.59
KRT28-201ENST00000306658 PSMB2P49721 201 aa11.37□□□□□ -0.59
KRT28-201ENST00000306658 LINC00337Q8N6G1 96 aa11.37□□□□□ -0.59
KRT28-201ENST00000306658 DNAH6Q9C0G6 4158 aa11.37□□□□□ -0.59
KRT28-201ENST00000306658 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
KRT28-201ENST00000306658 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
KRT28-201ENST00000306658 A0A087WTM6 91 aa11.35□□□□□ -0.59
KRT28-201ENST00000306658 Q8N814 137 aa11.35□□□□□ -0.59
KRT28-201ENST00000306658 PRR3P79522 188 aaKnown RBP11.34□□□□□ -0.59
KRT28-201ENST00000306658 SCGB1C2P0DMR2 95 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 Q8NDZ9 215 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 TRBV10-2A0A0K0K1G8 114 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 COX6CP09669 75 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 GAGE2BQ13066 116 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 TMEM126AQ9H061 195 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 SPCS1Q9Y6A9 102 aa11.33□□□□□ -0.6
KRT28-201ENST00000306658 NCR3O14931 201 aa11.32□□□□□ -0.6
KRT28-201ENST00000306658 C9orf129Q5T035 196 aaKnown RBP11.32□□□□□ -0.6
KRT28-201ENST00000306658 GTF2H5Q6ZYL4 71 aa11.32□□□□□ -0.6
KRT28-201ENST00000306658 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
KRT28-201ENST00000306658 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
KRT28-201ENST00000306658 TRIAP1O43715 76 aa11.3□□□□□ -0.6
KRT28-201ENST00000306658 VPREB1P12018 145 aa11.3□□□□□ -0.6
KRT28-201ENST00000306658 K7EP34 96 aa11.3□□□□□ -0.6
KRT28-201ENST00000306658 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
KRT28-201ENST00000306658 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
KRT28-201ENST00000306658 PLA2G2DQ9UNK4 145 aa11.29□□□□□ -0.6
KRT28-201ENST00000306658 C16orf90A8MZG2 172 aa11.28□□□□□ -0.6
KRT28-201ENST00000306658 TRBV20-1A0A075B6N2 111 aa11.27□□□□□ -0.6
KRT28-201ENST00000306658 M0R378 163 aa11.27□□□□□ -0.6
KRT28-201ENST00000306658 SMIM11BQ8TCY0 68 aa11.27□□□□□ -0.6
KRT28-201ENST00000306658 DNAH2Q9P225 4427 aa11.26□□□□□ -0.61
KRT28-201ENST00000306658 NKAPP1Q8N9T2 125 aa11.26□□□□□ -0.61
KRT28-201ENST00000306658 A0A096LNI7 61 aa11.25□□□□□ -0.61
KRT28-201ENST00000306658 IGLV6-57P01721 117 aa11.25□□□□□ -0.61
KRT28-201ENST00000306658 LCE6AA0A183 80 aa11.24□□□□□ -0.61
KRT28-201ENST00000306658 TCL1BO95988 128 aa11.24□□□□□ -0.61
KRT28-201ENST00000306658 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
KRT28-201ENST00000306658 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 IGKV2-24A0A0C4DH68 120 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 RTL8CO15255 209 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 TNP2Q05952 138 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 CBY1Q9Y3M2 126 aa11.23□□□□□ -0.61
KRT28-201ENST00000306658 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
KRT28-201ENST00000306658 LINC00474Q9P2X8 69 aa11.22□□□□□ -0.61
KRT28-201ENST00000306658 FAM168BA1KXE4 195 aa11.21□□□□□ -0.61
KRT28-201ENST00000306658 H3BMG7 143 aa11.21□□□□□ -0.61
KRT28-201ENST00000306658 H0YGX0 51 aa11.2□□□□□ -0.62
KRT28-201ENST00000306658 ATXN8Q156A1 80 aa11.2□□□□□ -0.62
KRT28-201ENST00000306658 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
KRT28-201ENST00000306658 IGLV5-52A0A0A0MRZ9 124 aa11.19□□□□□ -0.62
KRT28-201ENST00000306658 FAM19A5Q7Z5A7 132 aaPredicted RBP11.19□□□□□ -0.62
KRT28-201ENST00000306658 CLEC2BQ92478 149 aa11.19□□□□□ -0.62
KRT28-201ENST00000306658 DNAH17Q9UFH2 4485 aa11.18□□□□□ -0.62
KRT28-201ENST00000306658 TRAV23DV6A0A075B6W5 121 aa11.18□□□□□ -0.62
KRT28-201ENST00000306658 C7orf33Q8WU49 177 aa11.18□□□□□ -0.62
KRT28-201ENST00000306658 C22orf24Q9Y442 160 aa11.18□□□□□ -0.62
KRT28-201ENST00000306658 HYDINQ4G0P3 5121 aa11.18□□□□□ -0.62
KRT28-201ENST00000306658 LST1O00453 97 aa11.17□□□□□ -0.62
KRT28-201ENST00000306658 C6orf99Q4VX62 202 aa11.17□□□□□ -0.62
KRT28-201ENST00000306658 KRTAP7-1Q8IUC3 87 aa11.17□□□□□ -0.62
KRT28-201ENST00000306658 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
KRT28-201ENST00000306658 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
KRT28-201ENST00000306658 A0A1W2PNN7 141 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
KRT28-201ENST00000306658 FUSP35637 526 aaKnown RBP eCLIP11.14□□□□□ -0.63
KRT28-201ENST00000306658 DIRC1Q969H9 104 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 DPH3Q96FX2 82 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 LINC00167Q96N53 147 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 FRAS1Q86XX4 4008 aa11.14□□□□□ -0.63
KRT28-201ENST00000306658 F8W1H4 67 aa11.13□□□□□ -0.63
KRT28-201ENST00000306658 M0QXV9 152 aa11.13□□□□□ -0.63
KRT28-201ENST00000306658 HECTD4Q9Y4D8 3996 aa11.12□□□□□ -0.63
KRT28-201ENST00000306658 SACSQ9NZJ4 4579 aa11.12□□□□□ -0.63
KRT28-201ENST00000306658 IGLV1-50A0A075B6I6 118 aa11.12□□□□□ -0.63
KRT28-201ENST00000306658 RPL37AP8A6NKH3 93 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 TRACP01848 142 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 TRBV7-6A0A0J9YX20 115 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 SNCGO76070 127 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
KRT28-201ENST00000306658 C9JAW5 83 aa11.1□□□□□ -0.63
KRT28-201ENST00000306658 PRYO14603 147 aa11.09□□□□□ -0.63
KRT28-201ENST00000306658 A0A087WYN8 130 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms