RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 LINC01556Q5JQF7 62 aa11.13□□□□□ -0.63
USP42-201ENST00000306177 CIRBP-AS1Q8TBR5 109 aa11.12□□□□□ -0.63
USP42-201ENST00000306177 COL27A1Q8IZC6 1860 aaPredicted RBP11.12□□□□□ -0.63
USP42-201ENST00000306177 CELSR3Q9NYQ7 3312 aa11.12□□□□□ -0.63
USP42-201ENST00000306177 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
USP42-201ENST00000306177 VPS13AQ96RL7 3174 aa11.12□□□□□ -0.63
USP42-201ENST00000306177 NHLRC4P0CG21 123 aaPredicted RBP11.11□□□□□ -0.63
USP42-201ENST00000306177 ESRGQ1W209 222 aa11.11□□□□□ -0.63
USP42-201ENST00000306177 A8MTW9 85 aa11.1□□□□□ -0.63
USP42-201ENST00000306177 Q8N3U1 123 aa11.09□□□□□ -0.63
USP42-201ENST00000306177 A0A087WSZ3 146 aa11.08□□□□□ -0.64
USP42-201ENST00000306177 LINC00208Q96KT6 92 aa11.07□□□□□ -0.64
USP42-201ENST00000306177 LAMA1P25391 3075 aa11.07□□□□□ -0.64
USP42-201ENST00000306177 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
USP42-201ENST00000306177 IGHV6-1A0A0B4J1U7 121 aa11.06□□□□□ -0.64
USP42-201ENST00000306177 IGLV5-45A0A087WSX0 123 aa11.06□□□□□ -0.64
USP42-201ENST00000306177 FSHBP01225 129 aa11.06□□□□□ -0.64
USP42-201ENST00000306177 C22orf24Q9Y442 160 aa11.06□□□□□ -0.64
USP42-201ENST00000306177 LINC01547P58512 204 aaPredicted RBP11.06□□□□□ -0.64
USP42-201ENST00000306177 PMAIP1Q13794 54 aa11.05□□□□□ -0.64
USP42-201ENST00000306177 X6R8D5 127 aa11.05□□□□□ -0.64
USP42-201ENST00000306177 Q6ZVQ6 151 aa11.05□□□□□ -0.64
USP42-201ENST00000306177 KLK9Q2XQG4 91 aa11.05□□□□□ -0.64
USP42-201ENST00000306177 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
USP42-201ENST00000306177 LINC00846Q9NV44 126 aa11.04□□□□□ -0.64
USP42-201ENST00000306177 PRLHP81277 87 aa11.04□□□□□ -0.64
USP42-201ENST00000306177 F8P00451 2351 aa11.04□□□□□ -0.64
USP42-201ENST00000306177 H3BNG1 76 aa11.03□□□□□ -0.64
USP42-201ENST00000306177 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
USP42-201ENST00000306177 CHD9Q3L8U1 2897 aa11□□□□□ -0.65
USP42-201ENST00000306177 Q9UF83 564 aa11□□□□□ -0.65
USP42-201ENST00000306177 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
USP42-201ENST00000306177 MUC4Q99102 2169 aa10.99□□□□□ -0.65
USP42-201ENST00000306177 KRTAP24-1Q3LI83 254 aa10.99□□□□□ -0.65
USP42-201ENST00000306177 MDFIQ99750 246 aa10.99□□□□□ -0.65
USP42-201ENST00000306177 CFAP54Q96N23 3096 aa10.98□□□□□ -0.65
USP42-201ENST00000306177 DEFB116Q30KQ4 102 aa10.98□□□□□ -0.65
USP42-201ENST00000306177 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
USP42-201ENST00000306177 CXCL6P80162 114 aa10.96□□□□□ -0.66
USP42-201ENST00000306177 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
USP42-201ENST00000306177 HCG22E2RYF7 251 aa10.96□□□□□ -0.66
USP42-201ENST00000306177 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
USP42-201ENST00000306177 LINC00167Q96N53 147 aa10.95□□□□□ -0.66
USP42-201ENST00000306177 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
USP42-201ENST00000306177 SOSTDC1Q6X4U4 206 aa10.94□□□□□ -0.66
USP42-201ENST00000306177 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
USP42-201ENST00000306177 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
USP42-201ENST00000306177 TRBV7-7A0A0K0K1E9 115 aa10.94□□□□□ -0.66
USP42-201ENST00000306177 H0Y9P7 68 aa10.93□□□□□ -0.66
USP42-201ENST00000306177 Q8NAQ8 132 aa10.93□□□□□ -0.66
USP42-201ENST00000306177 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
USP42-201ENST00000306177 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
USP42-201ENST00000306177 SPATA3Q8NHX4 192 aa10.92□□□□□ -0.66
USP42-201ENST00000306177 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
USP42-201ENST00000306177 PCOTHQ58A44 107 aa10.91□□□□□ -0.66
USP42-201ENST00000306177 SMCPP49901 116 aaPredicted RBP10.9□□□□□ -0.66
USP42-201ENST00000306177 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
USP42-201ENST00000306177 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
USP42-201ENST00000306177 RETNLBQ9BQ08 111 aa10.89□□□□□ -0.67
USP42-201ENST00000306177 FRYLO94915 3013 aa10.89□□□□□ -0.67
USP42-201ENST00000306177 A0A096LNT2 108 aa10.86□□□□□ -0.67
USP42-201ENST00000306177 PRO0461Q9UI25 63 aa10.86□□□□□ -0.67
USP42-201ENST00000306177 REV3LO60673 3130 aa10.85□□□□□ -0.67
USP42-201ENST00000306177 hDV103S1A0JD37 113 aa10.84□□□□□ -0.67
USP42-201ENST00000306177 COL6A3P12111 3177 aa10.84□□□□□ -0.67
USP42-201ENST00000306177 A0A1B0GW54 56 aa10.84□□□□□ -0.67
USP42-201ENST00000306177 LINC00588Q9Y4M8 146 aa10.84□□□□□ -0.67
USP42-201ENST00000306177 Q6ZRX8 168 aa10.83□□□□□ -0.68
USP42-201ENST00000306177 GVQW2A0A096LPI5 108 aaPredicted RBP10.82□□□□□ -0.68
USP42-201ENST00000306177 SMIM29Q86T20 159 aa10.82□□□□□ -0.68
USP42-201ENST00000306177 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
USP42-201ENST00000306177 PSPHP1O15172 72 aa10.81□□□□□ -0.68
USP42-201ENST00000306177 MOBPQ13875 183 aa10.81□□□□□ -0.68
USP42-201ENST00000306177 C1orf64Q8NEQ6 169 aa10.8□□□□□ -0.68
USP42-201ENST00000306177 C16orf90A8MZG2 172 aa10.8□□□□□ -0.68
USP42-201ENST00000306177 LITAFQ99732 161 aa10.8□□□□□ -0.68
USP42-201ENST00000306177 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
USP42-201ENST00000306177 Q6ZQT0 140 aa10.79□□□□□ -0.68
USP42-201ENST00000306177 LOC110117498A0A087WWA1 95 aa10.79□□□□□ -0.68
USP42-201ENST00000306177 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
USP42-201ENST00000306177 Q8NBF4 154 aa10.77□□□□□ -0.69
USP42-201ENST00000306177 RTL8CO15255 209 aa10.77□□□□□ -0.69
USP42-201ENST00000306177 BCE1O60756 84 aa10.77□□□□□ -0.69
USP42-201ENST00000306177 SPINK1P00995 79 aa10.76□□□□□ -0.69
USP42-201ENST00000306177 DNAH10OSP0CZ25 163 aa10.76□□□□□ -0.69
USP42-201ENST00000306177 USP24Q9UPU5 2620 aa10.76□□□□□ -0.69
USP42-201ENST00000306177 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
USP42-201ENST00000306177 TP53AIP1Q9HCN2 124 aa10.75□□□□□ -0.69
USP42-201ENST00000306177 EPM2AB3EWF7 344 aa10.75□□□□□ -0.69
USP42-201ENST00000306177 Q6ZRP5 223 aa10.74□□□□□ -0.69
USP42-201ENST00000306177 MGAM2Q2M2H8 2515 aa10.74□□□□□ -0.69
USP42-201ENST00000306177 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
USP42-201ENST00000306177 ST20-AS1Q8NBB2 130 aa10.72□□□□□ -0.69
USP42-201ENST00000306177 IGKV2D-30A0A075B6S6 120 aa10.72□□□□□ -0.69
USP42-201ENST00000306177 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
USP42-201ENST00000306177 FREM2Q5SZK8 3169 aa10.72□□□□□ -0.69
USP42-201ENST00000306177 VPREB1P12018 145 aa10.71□□□□□ -0.69
USP42-201ENST00000306177 WDFY3Q8IZQ1 3526 aa10.71□□□□□ -0.69
USP42-201ENST00000306177 IGLV6-57P01721 117 aa10.71□□□□□ -0.69
USP42-201ENST00000306177 CRYGAP11844 174 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms