RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
SHROOM4-201ENST00000289292 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.73
SHROOM4-201ENST00000289292 BCE1O60756 84 aa10.46□□□□□ -0.73
SHROOM4-201ENST00000289292 NUPR2A6NF83 97 aa10.45□□□□□ -0.74
SHROOM4-201ENST00000289292 NAV2Q8IVL1 2488 aa10.44□□□□□ -0.74
SHROOM4-201ENST00000289292 PCNTO95613 3336 aa10.43□□□□□ -0.74
SHROOM4-201ENST00000289292 A0A1B0GU69 56 aa10.43□□□□□ -0.74
SHROOM4-201ENST00000289292 LINC00476Q8WZB0 136 aa10.43□□□□□ -0.74
SHROOM4-201ENST00000289292 BPTFQ12830 3046 aa10.42□□□□□ -0.74
SHROOM4-201ENST00000289292 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
SHROOM4-201ENST00000289292 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
SHROOM4-201ENST00000289292 SERTAD4-AS1Q5TG53 156 aa10.42□□□□□ -0.74
SHROOM4-201ENST00000289292 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
SHROOM4-201ENST00000289292 NOTCH2Q04721 2471 aa10.41□□□□□ -0.74
SHROOM4-201ENST00000289292 MOBPQ13875 183 aa10.4□□□□□ -0.74
SHROOM4-201ENST00000289292 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
SHROOM4-201ENST00000289292 FAM168BA1KXE4 195 aa10.39□□□□□ -0.75
SHROOM4-201ENST00000289292 CHTF8P0CG12 524 aa10.38□□□□□ -0.75
SHROOM4-201ENST00000289292 Q6ZRX8 168 aa10.38□□□□□ -0.75
SHROOM4-201ENST00000289292 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
SHROOM4-201ENST00000289292 CCDC168Q8NDH2 2452 aa10.37□□□□□ -0.75
SHROOM4-201ENST00000289292 A8MUN3 132 aa10.37□□□□□ -0.75
SHROOM4-201ENST00000289292 CEP350Q5VT06 3117 aa10.37□□□□□ -0.75
SHROOM4-201ENST00000289292 Q6ZRP5 223 aa10.36□□□□□ -0.75
SHROOM4-201ENST00000289292 Q8NBF4 154 aa10.35□□□□□ -0.75
SHROOM4-201ENST00000289292 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
SHROOM4-201ENST00000289292 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
SHROOM4-201ENST00000289292 K7EQZ3 153 aa10.33□□□□□ -0.76
SHROOM4-201ENST00000289292 C1orf134Q5TEV5 83 aa10.33□□□□□ -0.76
SHROOM4-201ENST00000289292 ACYP2P14621 99 aa10.32□□□□□ -0.76
SHROOM4-201ENST00000289292 C9orf129Q5T035 196 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-201ENST00000289292 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
SHROOM4-201ENST00000289292 C5orf42Q9H799 3197 aa10.32□□□□□ -0.76
SHROOM4-201ENST00000289292 EPM2AB3EWF7 344 aa10.32□□□□□ -0.76
SHROOM4-201ENST00000289292 SPACA4Q8TDM5 124 aa10.31□□□□□ -0.76
SHROOM4-201ENST00000289292 Q8NAQ8 132 aa10.3□□□□□ -0.76
SHROOM4-201ENST00000289292 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 VPREB1P12018 145 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 MDFIQ99750 246 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 CACNA1AO00555 2505 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
SHROOM4-201ENST00000289292 ATP11AUNQ6ZP68 121 aa10.28□□□□□ -0.76
SHROOM4-201ENST00000289292 TRAV22A0A0B4J277 110 aa10.28□□□□□ -0.76
SHROOM4-201ENST00000289292 TLN1Q9Y490 2541 aaKnown RBP10.27□□□□□ -0.76
SHROOM4-201ENST00000289292 A0A0G2JQZ4 141 aa10.27□□□□□ -0.77
SHROOM4-201ENST00000289292 A0A1W2PNN7 141 aa10.27□□□□□ -0.77
SHROOM4-201ENST00000289292 MUC4Q99102 2169 aa10.26□□□□□ -0.77
SHROOM4-201ENST00000289292 LINC00588Q9Y4M8 146 aa10.25□□□□□ -0.77
SHROOM4-201ENST00000289292 COA5Q86WW8 74 aa10.25□□□□□ -0.77
SHROOM4-201ENST00000289292 C8orf87E5RJ46 101 aa10.24□□□□□ -0.77
SHROOM4-201ENST00000289292 H7BZZ5 65 aa10.24□□□□□ -0.77
SHROOM4-201ENST00000289292 GVQW2A0A096LPI5 108 aaPredicted RBP10.23□□□□□ -0.77
SHROOM4-201ENST00000289292 H3BPC8 53 aa10.23□□□□□ -0.77
SHROOM4-201ENST00000289292 FN1P02751 2386 aaKnown RBP10.23□□□□□ -0.77
SHROOM4-201ENST00000289292 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
SHROOM4-201ENST00000289292 A0A1B0GW54 56 aa10.22□□□□□ -0.77
SHROOM4-201ENST00000289292 ERC2-IT1O76042 136 aa10.21□□□□□ -0.78
SHROOM4-201ENST00000289292 C16orf90A8MZG2 172 aa10.2□□□□□ -0.78
SHROOM4-201ENST00000289292 KLKP1Q107X0 134 aa10.2□□□□□ -0.78
SHROOM4-201ENST00000289292 MYO9AB2RTY4 2548 aa10.2□□□□□ -0.78
SHROOM4-201ENST00000289292 H3BNG1 76 aa10.2□□□□□ -0.78
SHROOM4-201ENST00000289292 LINC00313P59037 77 aa10.17□□□□□ -0.78
SHROOM4-201ENST00000289292 IGLV1-50A0A075B6I6 118 aa10.17□□□□□ -0.78
SHROOM4-201ENST00000289292 A8MWP4 228 aa10.16□□□□□ -0.78
SHROOM4-201ENST00000289292 LINC00528Q8N1L1 170 aa10.16□□□□□ -0.78
SHROOM4-201ENST00000289292 RTL8CO15255 209 aa10.16□□□□□ -0.78
SHROOM4-201ENST00000289292 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
SHROOM4-201ENST00000289292 GIG44P09565 113 aaPredicted RBP10.14□□□□□ -0.79
SHROOM4-201ENST00000289292 C15orf56Q8N910 161 aa10.14□□□□□ -0.79
SHROOM4-201ENST00000289292 SPINT4Q6UDR6 99 aa10.13□□□□□ -0.79
SHROOM4-201ENST00000289292 Q8N377 158 aa10.13□□□□□ -0.79
SHROOM4-201ENST00000289292 ZNF575Q86XF7 245 aa10.13□□□□□ -0.79
SHROOM4-201ENST00000289292 KCNQ1DNQ9H478 68 aa10.12□□□□□ -0.79
SHROOM4-201ENST00000289292 KRTAP24-1Q3LI83 254 aa10.11□□□□□ -0.79
SHROOM4-201ENST00000289292 MYO18BQ8IUG5 2567 aa10.11□□□□□ -0.79
SHROOM4-201ENST00000289292 CYP4F30PQ9H0H9 118 aa10.11□□□□□ -0.79
SHROOM4-201ENST00000289292 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
SHROOM4-201ENST00000289292 Q96NJ1 140 aa10.08□□□□□ -0.8
SHROOM4-201ENST00000289292 NBDYA0A0U1RRE5 68 aa10.08□□□□□ -0.8
SHROOM4-201ENST00000289292 LOC101927531A0A1B0GV80 90 aa10.08□□□□□ -0.8
SHROOM4-201ENST00000289292 ABCA12Q86UK0 2595 aa10.08□□□□□ -0.8
SHROOM4-201ENST00000289292 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
SHROOM4-201ENST00000289292 TLN2Q9Y4G6 2542 aa10.07□□□□□ -0.8
SHROOM4-201ENST00000289292 KRTAP10-3P60369 221 aa10.07□□□□□ -0.8
SHROOM4-201ENST00000289292 MRPL34Q9BQ48 92 aaKnown RBP10.07□□□□□ -0.8
SHROOM4-201ENST00000289292 CD164Q04900 197 aa10.07□□□□□ -0.8
SHROOM4-201ENST00000289292 SSBP3-AS1Q7Z2R9 100 aa10.06□□□□□ -0.8
SHROOM4-201ENST00000289292 DSCR10P59022 87 aa10.05□□□□□ -0.8
SHROOM4-201ENST00000289292 KRTAP10-11P60412 298 aa10.05□□□□□ -0.8
SHROOM4-201ENST00000289292 LRRK2Q5S007 2527 aa10.05□□□□□ -0.8
SHROOM4-201ENST00000289292 KTN1-AS1Q86SY8 53 aa10.04□□□□□ -0.8
SHROOM4-201ENST00000289292 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
SHROOM4-201ENST00000289292 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
SHROOM4-201ENST00000289292 USP9XQ93008 2570 aaPredicted RBP10.03□□□□□ -0.8
SHROOM4-201ENST00000289292 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
SHROOM4-201ENST00000289292 PRR15Q8IV56 129 aa10.02□□□□□ -0.81
SHROOM4-201ENST00000289292 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
SHROOM4-201ENST00000289292 OBSCN-AS1Q96MR7 158 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms