RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 Q8IZM0 81 aa7.12□□□□□ -1.27
UPF3B-201ENST00000276201 NCR3O14931 201 aa7.12□□□□□ -1.27
UPF3B-201ENST00000276201 TM2D3Q9BRN9 247 aa7.12□□□□□ -1.27
UPF3B-201ENST00000276201 PAX4O43316 350 aa7.11□□□□□ -1.27
UPF3B-201ENST00000276201 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
UPF3B-201ENST00000276201 TOMM7Q9P0U1 55 aa7.11□□□□□ -1.27
UPF3B-201ENST00000276201 COX17Q14061 63 aa7.11□□□□□ -1.27
UPF3B-201ENST00000276201 Q8N814 137 aa7.11□□□□□ -1.27
UPF3B-201ENST00000276201 LINC00959A0A1B0GUT2 108 aa7.1□□□□□ -1.27
UPF3B-201ENST00000276201 H3BQ85 93 aa7.1□□□□□ -1.27
UPF3B-201ENST00000276201 NOP10Q9NPE3 64 aaKnown RBP7.1□□□□□ -1.27
UPF3B-201ENST00000276201 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
UPF3B-201ENST00000276201 A0A1B0GUV1 79 aa7.1□□□□□ -1.27
UPF3B-201ENST00000276201 NANOS2P60321 138 aaKnown RBP7.1□□□□□ -1.27
UPF3B-201ENST00000276201 MUC7Q8TAX7 377 aa7.1□□□□□ -1.27
UPF3B-201ENST00000276201 NBEAL2Q6ZNJ1 2754 aa7.09□□□□□ -1.27
UPF3B-201ENST00000276201 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
UPF3B-201ENST00000276201 GIG44P09565 113 aaPredicted RBP7.09□□□□□ -1.27
UPF3B-201ENST00000276201 RETNQ9HD89 108 aa7.09□□□□□ -1.27
UPF3B-201ENST00000276201 A0A087WVE0 104 aa7.09□□□□□ -1.28
UPF3B-201ENST00000276201 FHL2Q14192 279 aa7.09□□□□□ -1.28
UPF3B-201ENST00000276201 LOC110117498A0A087WWA1 95 aa7.08□□□□□ -1.28
UPF3B-201ENST00000276201 RPL35AP18077 110 aaKnown RBP7.08□□□□□ -1.28
UPF3B-201ENST00000276201 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
UPF3B-201ENST00000276201 TRGV2A0A075B6R0 118 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 TRGV4A0A0C4DH28 118 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 IGHV4-28A0A0C4DH34 117 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 GHRHP01286 108 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 CSNK1G2-AS1Q8NCQ2 148 aa7.07□□□□□ -1.28
UPF3B-201ENST00000276201 HUWE1Q7Z6Z7 4374 aaKnown RBP7.07□□□□□ -1.28
UPF3B-201ENST00000276201 LOC100131303A0A0U1RQF7 123 aa7.06□□□□□ -1.28
UPF3B-201ENST00000276201 SLPIP03973 132 aa7.06□□□□□ -1.28
UPF3B-201ENST00000276201 PFN2P35080 140 aa7.06□□□□□ -1.28
UPF3B-201ENST00000276201 KIR2DL5BQ8NHK3 375 aa7.06□□□□□ -1.28
UPF3B-201ENST00000276201 UBL5Q9BZL1 73 aa7.06□□□□□ -1.28
UPF3B-201ENST00000276201 OXTP01178 125 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 PDE6GP18545 87 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 APOC4P55056 127 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 WWC2-AS2Q96NR7 200 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 TRAV7A0A075B6U4 112 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 C6orf223Q8N319 242 aa7.05□□□□□ -1.28
UPF3B-201ENST00000276201 Q5XG85 94 aa7.04□□□□□ -1.28
UPF3B-201ENST00000276201 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
UPF3B-201ENST00000276201 KIAA0087Q14695 138 aa7.04□□□□□ -1.28
UPF3B-201ENST00000276201 DEFB135Q30KP9 77 aa7.04□□□□□ -1.28
UPF3B-201ENST00000276201 Q6ZQT0 140 aa7.04□□□□□ -1.28
UPF3B-201ENST00000276201 LINC00575Q6W349 94 aa7.03□□□□□ -1.28
UPF3B-201ENST00000276201 DSCR8Q96T75 97 aa7.03□□□□□ -1.28
UPF3B-201ENST00000276201 SERP1Q9Y6X1 66 aa7.02□□□□□ -1.29
UPF3B-201ENST00000276201 XCL1P47992 114 aa7.02□□□□□ -1.29
UPF3B-201ENST00000276201 CXCL6P80162 114 aa7.02□□□□□ -1.29
UPF3B-201ENST00000276201 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
UPF3B-201ENST00000276201 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
UPF3B-201ENST00000276201 IGKV3OR2-268A0A0C4DH90 116 aa7.01□□□□□ -1.29
UPF3B-201ENST00000276201 FAM236DA0A1B0GTK5 79 aa7.01□□□□□ -1.29
UPF3B-201ENST00000276201 FAM236CP0DP71 79 aa7.01□□□□□ -1.29
UPF3B-201ENST00000276201 ENHOQ6UWT2 76 aa7.01□□□□□ -1.29
UPF3B-201ENST00000276201 FAM19A1Q7Z5A9 133 aa7.01□□□□□ -1.29
UPF3B-201ENST00000276201 RBM3P98179 157 aaKnown RBP7.01□□□□□ -1.29
UPF3B-201ENST00000276201 TRAV23DV6A0A075B6W5 121 aa7□□□□□ -1.29
UPF3B-201ENST00000276201 DNAH7Q8WXX0 4024 aa7□□□□□ -1.29
UPF3B-201ENST00000276201 H7BZZ5 65 aa6.98□□□□□ -1.29
UPF3B-201ENST00000276201 NDUFC1O43677 76 aa6.98□□□□□ -1.29
UPF3B-201ENST00000276201 ATP5EP56381 51 aaPredicted RBP6.98□□□□□ -1.29
UPF3B-201ENST00000276201 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
UPF3B-201ENST00000276201 IGLV6-57P01721 117 aa6.97□□□□□ -1.29
UPF3B-201ENST00000276201 LINC01547P58512 204 aaPredicted RBP6.97□□□□□ -1.29
UPF3B-201ENST00000276201 C6orf99Q4VX62 202 aa6.97□□□□□ -1.29
UPF3B-201ENST00000276201 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
UPF3B-201ENST00000276201 C3orf84H3BNL1 204 aa6.96□□□□□ -1.29
UPF3B-201ENST00000276201 GYPEP15421 78 aa6.96□□□□□ -1.29
UPF3B-201ENST00000276201 C4orf26Q17RF5 130 aa6.96□□□□□ -1.29
UPF3B-201ENST00000276201 Q6ZVQ6 151 aa6.96□□□□□ -1.29
UPF3B-201ENST00000276201 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
UPF3B-201ENST00000276201 ERC2-IT1O76042 136 aa6.96□□□□□ -1.3
UPF3B-201ENST00000276201 PRO0255Q9UI72 69 aa6.96□□□□□ -1.3
UPF3B-201ENST00000276201 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-201ENST00000276201 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
UPF3B-201ENST00000276201 C11orf68Q9H3H3 251 aaKnown RBP6.95□□□□□ -1.3
UPF3B-201ENST00000276201 X6R8D5 127 aa6.95□□□□□ -1.3
UPF3B-201ENST00000276201 Q8NAQ8 132 aa6.95□□□□□ -1.3
UPF3B-201ENST00000276201 CHCHD10Q8WYQ3 142 aaPredicted RBP6.95□□□□□ -1.3
UPF3B-201ENST00000276201 CASC10Q5T4H9 136 aa6.94□□□□□ -1.3
UPF3B-201ENST00000276201 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
UPF3B-201ENST00000276201 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
UPF3B-201ENST00000276201 DEFB4AO15263 64 aa6.94□□□□□ -1.3
UPF3B-201ENST00000276201 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 Q8NDZ9 215 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 SMIM26A0A096LP01 95 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 LYRM9A8MSI8 78 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 MIFP14174 115 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 HRCT1Q6UXD1 115 aa6.93□□□□□ -1.3
UPF3B-201ENST00000276201 LAMTOR3Q9UHA4 124 aa6.92□□□□□ -1.3
UPF3B-201ENST00000276201 REG3AQ06141 175 aa6.91□□□□□ -1.3
UPF3B-201ENST00000276201 LINC00269Q8N2A0 174 aa6.91□□□□□ -1.3
UPF3B-201ENST00000276201 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
UPF3B-201ENST00000276201 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
UPF3B-201ENST00000276201 TRAV10A0A0B4J240 114 aa6.9□□□□□ -1.31
UPF3B-201ENST00000276201 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms