RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 USP17L23D6RBM5 183 aa11.67□□□□□ -0.54
SEC22C-202ENST00000273156 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
SEC22C-202ENST00000273156 SOSTDC1Q6X4U4 206 aa11.66□□□□□ -0.54
SEC22C-202ENST00000273156 LRP1BQ9NZR2 4599 aa11.65□□□□□ -0.54
SEC22C-202ENST00000273156 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
SEC22C-202ENST00000273156 EIF4EBP3O60516 100 aaPredicted RBP11.65□□□□□ -0.54
SEC22C-202ENST00000273156 C9orf116Q5BN46 136 aaPredicted RBP11.65□□□□□ -0.54
SEC22C-202ENST00000273156 C6orf48Q9UBA6 75 aa11.65□□□□□ -0.54
SEC22C-202ENST00000273156 PRO1854Q9UHT4 67 aa11.65□□□□□ -0.54
SEC22C-202ENST00000273156 RYR1P21817 5038 aa11.64□□□□□ -0.55
SEC22C-202ENST00000273156 SYCNQ0VAF6 134 aa11.64□□□□□ -0.55
SEC22C-202ENST00000273156 Q6ZRU5 148 aa11.64□□□□□ -0.55
SEC22C-202ENST00000273156 Q8N1X5 172 aa11.64□□□□□ -0.55
SEC22C-202ENST00000273156 HSPG2P98160 4391 aa11.63□□□□□ -0.55
SEC22C-202ENST00000273156 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
SEC22C-202ENST00000273156 LOC107984156A0A0G2JMH3 177 aa11.61□□□□□ -0.55
SEC22C-202ENST00000273156 H3BUT2 72 aa11.61□□□□□ -0.55
SEC22C-202ENST00000273156 ARL17AQ8IVW1 177 aa11.61□□□□□ -0.55
SEC22C-202ENST00000273156 LECT2O14960 151 aa11.6□□□□□ -0.55
SEC22C-202ENST00000273156 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
SEC22C-202ENST00000273156 LRCOL1A6NCL2 159 aa11.59□□□□□ -0.55
SEC22C-202ENST00000273156 RNF151Q2KHN1 245 aa11.59□□□□□ -0.55
SEC22C-202ENST00000273156 C14orf177Q52M58 125 aa11.59□□□□□ -0.55
SEC22C-202ENST00000273156 DNAH5Q8TE73 4624 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 IGLV5-52A0A0A0MRZ9 124 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 NAA38Q9BRA0 125 aaKnown RBP11.57□□□□□ -0.56
SEC22C-202ENST00000273156 KRTAP4-5Q9BYR2 181 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 NDUFC2-KCTD14E9PQ53 114 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 TSPAN13O95857 204 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 VAMP3Q15836 100 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 Q8N814 137 aa11.57□□□□□ -0.56
SEC22C-202ENST00000273156 TRAV13-2A0A0B4J235 113 aa11.56□□□□□ -0.56
SEC22C-202ENST00000273156 A0A1W2PPM0 123 aa11.56□□□□□ -0.56
SEC22C-202ENST00000273156 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
SEC22C-202ENST00000273156 H7C2G1 150 aa11.55□□□□□ -0.56
SEC22C-202ENST00000273156 NDUFC2O95298 119 aa11.55□□□□□ -0.56
SEC22C-202ENST00000273156 SLPIP03973 132 aa11.55□□□□□ -0.56
SEC22C-202ENST00000273156 FABP2P12104 132 aa11.55□□□□□ -0.56
SEC22C-202ENST00000273156 Q1RN00 199 aa11.55□□□□□ -0.56
SEC22C-202ENST00000273156 KRTAP10-1P60331 282 aa11.54□□□□□ -0.56
SEC22C-202ENST00000273156 WFDC2Q14508 124 aa11.54□□□□□ -0.56
SEC22C-202ENST00000273156 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
SEC22C-202ENST00000273156 TLX1NBP0CAT3 122 aa11.53□□□□□ -0.56
SEC22C-202ENST00000273156 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
SEC22C-202ENST00000273156 IGKV2-28A0A075B6P5 120 aa11.52□□□□□ -0.57
SEC22C-202ENST00000273156 EPM2AB3EWF7 344 aa11.52□□□□□ -0.57
SEC22C-202ENST00000273156 IGKV2D-28P01615 120 aa11.52□□□□□ -0.57
SEC22C-202ENST00000273156 PSMB2P49721 201 aa11.52□□□□□ -0.57
SEC22C-202ENST00000273156 XGP55808 180 aa11.51□□□□□ -0.57
SEC22C-202ENST00000273156 LYRM7Q5U5X0 104 aa11.51□□□□□ -0.57
SEC22C-202ENST00000273156 XAGE1AQ9HD64 81 aa11.51□□□□□ -0.57
SEC22C-202ENST00000273156 CNBPP62633 177 aaKnown RBP11.5□□□□□ -0.57
SEC22C-202ENST00000273156 GAGE2EQ4V326 116 aa11.5□□□□□ -0.57
SEC22C-202ENST00000273156 GAGE2DQ9UEU5 116 aa11.5□□□□□ -0.57
SEC22C-202ENST00000273156 GAGE10A6NGK3 116 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 Q6ZRP5 223 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 GTF2H5Q6ZYL4 71 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 LINC00337Q8N6G1 96 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 SCGB1C2P0DMR2 95 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 SPCS1Q9Y6A9 102 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 ABCA13Q86UQ4 5058 aa11.49□□□□□ -0.57
SEC22C-202ENST00000273156 RPL18AQ02543 176 aaKnown RBP11.48□□□□□ -0.57
SEC22C-202ENST00000273156 OR13C6PQ8NH95 151 aa11.48□□□□□ -0.57
SEC22C-202ENST00000273156 COX6CP09669 75 aa11.47□□□□□ -0.57
SEC22C-202ENST00000273156 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.57
SEC22C-202ENST00000273156 K7EP34 96 aa11.46□□□□□ -0.57
SEC22C-202ENST00000273156 UBE2V1Q13404 147 aa11.46□□□□□ -0.57
SEC22C-202ENST00000273156 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.46□□□□□ -0.58
SEC22C-202ENST00000273156 PRR3P79522 188 aaKnown RBP11.46□□□□□ -0.58
SEC22C-202ENST00000273156 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
SEC22C-202ENST00000273156 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
SEC22C-202ENST00000273156 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
SEC22C-202ENST00000273156 NCR3O14931 201 aa11.43□□□□□ -0.58
SEC22C-202ENST00000273156 TRIAP1O43715 76 aa11.43□□□□□ -0.58
SEC22C-202ENST00000273156 Q8NDZ9 215 aa11.43□□□□□ -0.58
SEC22C-202ENST00000273156 TRBV20-1A0A075B6N2 111 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 RPL28P46779 137 aaKnown RBP11.42□□□□□ -0.58
SEC22C-202ENST00000273156 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 S100A7L2Q5SY68 101 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 Q5VSD8 79 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 PKIGQ9Y2B9 76 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 VPREB1P12018 145 aa11.42□□□□□ -0.58
SEC22C-202ENST00000273156 C9orf129Q5T035 196 aaKnown RBP11.42□□□□□ -0.58
SEC22C-202ENST00000273156 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.58
SEC22C-202ENST00000273156 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.58
SEC22C-202ENST00000273156 C9orf163Q8N9P6 203 aa11.39□□□□□ -0.59
SEC22C-202ENST00000273156 M0R378 163 aa11.38□□□□□ -0.59
SEC22C-202ENST00000273156 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
SEC22C-202ENST00000273156 TCL1BO95988 128 aa11.38□□□□□ -0.59
SEC22C-202ENST00000273156 SMR3BP02814 79 aaPredicted RBP11.38□□□□□ -0.59
SEC22C-202ENST00000273156 Q6ZSA8 131 aa11.38□□□□□ -0.59
SEC22C-202ENST00000273156 NKAPP1Q8N9T2 125 aa11.37□□□□□ -0.59
SEC22C-202ENST00000273156 H3BMG7 143 aa11.36□□□□□ -0.59
SEC22C-202ENST00000273156 IGLV6-57P01721 117 aa11.36□□□□□ -0.59
SEC22C-202ENST00000273156 ATXN8Q156A1 80 aa11.36□□□□□ -0.59
SEC22C-202ENST00000273156 FAM30AQ9NZY2 134 aa11.36□□□□□ -0.59
SEC22C-202ENST00000273156 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
SEC22C-202ENST00000273156 SRRM2Q9UQ35 2752 aaKnown RBP11.35□□□□□ -0.59
SEC22C-202ENST00000273156 H0YGX0 51 aa11.34□□□□□ -0.59
SEC22C-202ENST00000273156 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms