RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 COX8CQ7Z4L0 72 aa11.59□□□□□ -0.55
TSPAN3-201ENST00000267970 FAM19A4Q96LR4 140 aa11.58□□□□□ -0.56
TSPAN3-201ENST00000267970 IGLV5-39A0A0G2JS06 123 aa11.57□□□□□ -0.56
TSPAN3-201ENST00000267970 FHL3Q13643 280 aa11.57□□□□□ -0.56
TSPAN3-201ENST00000267970 NAV2Q8IVL1 2488 aa11.56□□□□□ -0.56
TSPAN3-201ENST00000267970 LINC00476Q8WZB0 136 aa11.56□□□□□ -0.56
TSPAN3-201ENST00000267970 IGHV3OR16-9A0A0B4J2B5 98 aa11.56□□□□□ -0.56
TSPAN3-201ENST00000267970 PRO0461Q9UI25 63 aa11.55□□□□□ -0.56
TSPAN3-201ENST00000267970 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
TSPAN3-201ENST00000267970 Q6ZQT0 140 aa11.54□□□□□ -0.56
TSPAN3-201ENST00000267970 LINC00315P59091 139 aa11.53□□□□□ -0.56
TSPAN3-201ENST00000267970 C16orf95Q9H693 158 aa11.53□□□□□ -0.56
TSPAN3-201ENST00000267970 GOLGB1Q14789 3259 aaKnown RBP11.53□□□□□ -0.56
TSPAN3-201ENST00000267970 FAM168BA1KXE4 195 aa11.52□□□□□ -0.56
TSPAN3-201ENST00000267970 NHLRC4P0CG21 123 aaPredicted RBP11.52□□□□□ -0.57
TSPAN3-201ENST00000267970 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
TSPAN3-201ENST00000267970 LINC01600Q96MT4 127 aa11.49□□□□□ -0.57
TSPAN3-201ENST00000267970 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
TSPAN3-201ENST00000267970 ELOF1P60002 83 aaKnown RBP11.49□□□□□ -0.57
TSPAN3-201ENST00000267970 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
TSPAN3-201ENST00000267970 CENPFP49454 3210 aa11.49□□□□□ -0.57
TSPAN3-201ENST00000267970 LINC00313P59037 77 aa11.48□□□□□ -0.57
TSPAN3-201ENST00000267970 Q96NJ1 140 aa11.48□□□□□ -0.57
TSPAN3-201ENST00000267970 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
TSPAN3-201ENST00000267970 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
TSPAN3-201ENST00000267970 LINC01546A6NGU7 62 aa11.47□□□□□ -0.57
TSPAN3-201ENST00000267970 TRAV22A0A0B4J277 110 aa11.46□□□□□ -0.57
TSPAN3-201ENST00000267970 A0A0G2JQZ4 141 aa11.46□□□□□ -0.58
TSPAN3-201ENST00000267970 A0A1W2PNN7 141 aa11.46□□□□□ -0.58
TSPAN3-201ENST00000267970 IGF2RP11717 2491 aa11.46□□□□□ -0.58
TSPAN3-201ENST00000267970 COA5Q86WW8 74 aa11.45□□□□□ -0.58
TSPAN3-201ENST00000267970 FN1P02751 2386 aaKnown RBP11.44□□□□□ -0.58
TSPAN3-201ENST00000267970 F8WDY8 70 aa11.43□□□□□ -0.58
TSPAN3-201ENST00000267970 K7EQZ3 153 aa11.43□□□□□ -0.58
TSPAN3-201ENST00000267970 Q6ZRX8 168 aa11.41□□□□□ -0.58
TSPAN3-201ENST00000267970 TRBV7-4A0A0J9YYF1 115 aa11.41□□□□□ -0.58
TSPAN3-201ENST00000267970 COL27A1Q8IZC6 1860 aaPredicted RBP11.4□□□□□ -0.58
TSPAN3-201ENST00000267970 TYMSOSQ8TAI1 123 aa11.4□□□□□ -0.58
TSPAN3-201ENST00000267970 RTL8CO15255 209 aa11.4□□□□□ -0.59
TSPAN3-201ENST00000267970 Q8NBF4 154 aa11.39□□□□□ -0.59
TSPAN3-201ENST00000267970 Q6ZRP5 223 aa11.39□□□□□ -0.59
TSPAN3-201ENST00000267970 LINC00336Q6ZUF6 198 aa11.37□□□□□ -0.59
TSPAN3-201ENST00000267970 MYO9AB2RTY4 2548 aa11.36□□□□□ -0.59
TSPAN3-201ENST00000267970 NCOR2Q9Y618 2525 aa11.34□□□□□ -0.59
TSPAN3-201ENST00000267970 LOC110117498A0A087WWA1 95 aa11.34□□□□□ -0.59
TSPAN3-201ENST00000267970 IGLV5-45A0A087WSX0 123 aa11.34□□□□□ -0.59
TSPAN3-201ENST00000267970 CRIPTQ9P021 101 aa11.34□□□□□ -0.59
TSPAN3-201ENST00000267970 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
TSPAN3-201ENST00000267970 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
TSPAN3-201ENST00000267970 IGLV6-57P01721 117 aa11.33□□□□□ -0.6
TSPAN3-201ENST00000267970 DSCR10P59022 87 aa11.33□□□□□ -0.6
TSPAN3-201ENST00000267970 LINC00588Q9Y4M8 146 aa11.33□□□□□ -0.6
TSPAN3-201ENST00000267970 MIR22HGQ0VDD5 57 aa11.32□□□□□ -0.6
TSPAN3-201ENST00000267970 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
TSPAN3-201ENST00000267970 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
TSPAN3-201ENST00000267970 EP400Q96L91 3159 aa11.31□□□□□ -0.6
TSPAN3-201ENST00000267970 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
TSPAN3-201ENST00000267970 LITAFQ99732 161 aa11.3□□□□□ -0.6
TSPAN3-201ENST00000267970 UQCR11O14957 56 aa11.3□□□□□ -0.6
TSPAN3-201ENST00000267970 BCE1O60756 84 aa11.3□□□□□ -0.6
TSPAN3-201ENST00000267970 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
TSPAN3-201ENST00000267970 A0A0D9SG42 100 aa11.28□□□□□ -0.6
TSPAN3-201ENST00000267970 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.6
TSPAN3-201ENST00000267970 H3BPC8 53 aa11.27□□□□□ -0.61
TSPAN3-201ENST00000267970 C16orf90A8MZG2 172 aa11.27□□□□□ -0.61
TSPAN3-201ENST00000267970 DNAH10OSP0CZ25 163 aa11.25□□□□□ -0.61
TSPAN3-201ENST00000267970 TLN2Q9Y4G6 2542 aa11.25□□□□□ -0.61
TSPAN3-201ENST00000267970 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
TSPAN3-201ENST00000267970 LINC01554Q52M75 96 aa11.24□□□□□ -0.61
TSPAN3-201ENST00000267970 A8MWP4 228 aa11.23□□□□□ -0.61
TSPAN3-201ENST00000267970 LOC101927531A0A1B0GV80 90 aa11.23□□□□□ -0.61
TSPAN3-201ENST00000267970 C10orf142B7Z368 130 aa11.23□□□□□ -0.61
TSPAN3-201ENST00000267970 CD164Q04900 197 aa11.23□□□□□ -0.61
TSPAN3-201ENST00000267970 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
TSPAN3-201ENST00000267970 NBDYA0A0U1RRE5 68 aa11.22□□□□□ -0.61
TSPAN3-201ENST00000267970 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
TSPAN3-201ENST00000267970 Q8NAQ8 132 aa11.21□□□□□ -0.61
TSPAN3-201ENST00000267970 OBSCN-AS1Q96MR7 158 aa11.21□□□□□ -0.62
TSPAN3-201ENST00000267970 ZFYVE26Q68DK2 2539 aa11.2□□□□□ -0.62
TSPAN3-201ENST00000267970 KTN1-AS1Q86SY8 53 aa11.2□□□□□ -0.62
TSPAN3-201ENST00000267970 CYP4F30PQ9H0H9 118 aa11.2□□□□□ -0.62
TSPAN3-201ENST00000267970 FAM229AH3BQW9 127 aa11.19□□□□□ -0.62
TSPAN3-201ENST00000267970 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
TSPAN3-201ENST00000267970 IGFL1Q6UW32 110 aa11.19□□□□□ -0.62
TSPAN3-201ENST00000267970 GVQW2A0A096LPI5 108 aaPredicted RBP11.16□□□□□ -0.62
TSPAN3-201ENST00000267970 LCA10Q71F78 164 aa11.16□□□□□ -0.62
TSPAN3-201ENST00000267970 ZNF462Q96JM2 2506 aa11.15□□□□□ -0.62
TSPAN3-201ENST00000267970 IGLV1-50A0A075B6I6 118 aa11.14□□□□□ -0.63
TSPAN3-201ENST00000267970 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
TSPAN3-201ENST00000267970 WIPF1O43516 503 aa11.12□□□□□ -0.63
TSPAN3-201ENST00000267970 COX6B2Q6YFQ2 88 aa11.12□□□□□ -0.63
TSPAN3-201ENST00000267970 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
TSPAN3-201ENST00000267970 C8orf17Q9NRJ1 99 aa11.1□□□□□ -0.63
TSPAN3-201ENST00000267970 A0A1B0GW54 56 aa11.08□□□□□ -0.64
TSPAN3-201ENST00000267970 H7BZZ5 65 aa11.08□□□□□ -0.64
TSPAN3-201ENST00000267970 Q8N377 158 aa11.08□□□□□ -0.64
TSPAN3-201ENST00000267970 PRR15Q8IV56 129 aa11.08□□□□□ -0.64
TSPAN3-201ENST00000267970 Q8N1X5 172 aa11.08□□□□□ -0.64
TSPAN3-201ENST00000267970 H3BNG1 76 aa11.06□□□□□ -0.64
TSPAN3-201ENST00000267970 USP9XQ93008 2570 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms