RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 A8MTW9 85 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 LY6G6DO95868 133 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 ATP5EP2Q5VTU8 51 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 UBE2E2Q96LR5 201 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 COL6A5A8TX70 2615 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 OVOL2Q9BRP0 275 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 UBL5Q9BZL1 73 aa6.1□□□□□ -1.43
VAPB-201ENST00000265619 VWFP04275 2813 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 A8MU10 97 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 CCL24O00175 119 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 Q8N3U1 123 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 Q8N814 137 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 CDC42SE2Q9NRR3 84 aa6.09□□□□□ -1.43
VAPB-201ENST00000265619 IGLV1-40P01703 118 aa6.08□□□□□ -1.44
VAPB-201ENST00000265619 Q6ZVQ6 151 aa6.08□□□□□ -1.44
VAPB-201ENST00000265619 TRBV10-3A0A0K0K1G6 114 aa6.08□□□□□ -1.44
VAPB-201ENST00000265619 MIFP14174 115 aa6.08□□□□□ -1.44
VAPB-201ENST00000265619 Q6ZQT0 140 aa6.07□□□□□ -1.44
VAPB-201ENST00000265619 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
VAPB-201ENST00000265619 LINC00167Q96N53 147 aa6.07□□□□□ -1.44
VAPB-201ENST00000265619 NOTCH1P46531 2555 aa6.07□□□□□ -1.44
VAPB-201ENST00000265619 Q8N9L7 120 aa6.07□□□□□ -1.44
VAPB-201ENST00000265619 TRBV6-4A0A1B0GX49 114 aa6.06□□□□□ -1.44
VAPB-201ENST00000265619 DEFB131AP59861 70 aa6.06□□□□□ -1.44
VAPB-201ENST00000265619 Q8NDZ9 215 aa6.06□□□□□ -1.44
VAPB-201ENST00000265619 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 JMJD7-PLA2G4BH0Y9G9 81 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 KRTAP1-1Q07627 177 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 FSHBP01225 129 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 DAD1P61803 113 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 TMEM254Q8TBM7 123 aa6.05□□□□□ -1.44
VAPB-201ENST00000265619 IBA57-AS1B1ANH7 110 aa6.04□□□□□ -1.44
VAPB-201ENST00000265619 Q6ZTC4 211 aa6.04□□□□□ -1.44
VAPB-201ENST00000265619 LINC01006Q8NI28 216 aa6.04□□□□□ -1.44
VAPB-201ENST00000265619 NREPQ16612 68 aa6.04□□□□□ -1.44
VAPB-201ENST00000265619 IGLV4-60A0A075B6I1 120 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 TRGV1A0A0A0MS02 117 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 LOC100131303A0A0U1RQF7 123 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 PLAC8L1A1L4L8 177 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 H3BUA1 57 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 K7EMT4 169 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 UBE2L6O14933 153 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 K7EQD1 137 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 WFDC10AQ9H1F0 79 aa6.03□□□□□ -1.44
VAPB-201ENST00000265619 PRR26Q8N8Z3 221 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 RBM12B-AS1Q9P1G2 102 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 ESRGQ1W209 222 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 C1orf158Q8N1D5 194 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 C6orf223Q8N319 242 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.02□□□□□ -1.45
VAPB-201ENST00000265619 HIGD2AQ9BW72 106 aa6.02□□□□□ -1.45
VAPB-201ENST00000265619 C6orf99Q4VX62 202 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 Q6ZRP5 223 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 IGHV3OR16-9A0A0B4J2B5 98 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 PSPHP1O15172 72 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 BCE1O60756 84 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
VAPB-201ENST00000265619 C9orf116Q5BN46 136 aaPredicted RBP6□□□□□ -1.45
VAPB-201ENST00000265619 CLPSL2Q6UWE3 100 aa6□□□□□ -1.45
VAPB-201ENST00000265619 MGAM2Q2M2H8 2515 aa6□□□□□ -1.45
VAPB-201ENST00000265619 BPY2O14599 106 aa6□□□□□ -1.45
VAPB-201ENST00000265619 LYRM9A8MSI8 78 aa5.99□□□□□ -1.45
VAPB-201ENST00000265619 Q6ZRU5 148 aa5.99□□□□□ -1.45
VAPB-201ENST00000265619 PRYO14603 147 aa5.98□□□□□ -1.45
VAPB-201ENST00000265619 NDUFC1O43677 76 aa5.98□□□□□ -1.45
VAPB-201ENST00000265619 PRB2P02812 416 aaPredicted RBP5.98□□□□□ -1.45
VAPB-201ENST00000265619 C4orf3Q8WVX3 66 aa5.98□□□□□ -1.45
VAPB-201ENST00000265619 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
VAPB-201ENST00000265619 FUSP35637 526 aaKnown RBP eCLIP5.98□□□□□ -1.45
VAPB-201ENST00000265619 LOC110117498A0A087WWA1 95 aa5.98□□□□□ -1.45
VAPB-201ENST00000265619 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
VAPB-201ENST00000265619 TRRAPQ9Y4A5 3859 aa5.97□□□□□ -1.45
VAPB-201ENST00000265619 CXCL6P80162 114 aa5.97□□□□□ -1.45
VAPB-201ENST00000265619 LINC00612Q8N6U2 182 aa5.97□□□□□ -1.45
VAPB-201ENST00000265619 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.45
VAPB-201ENST00000265619 C10orf25Q5T742 122 aa5.96□□□□□ -1.45
VAPB-201ENST00000265619 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
VAPB-201ENST00000265619 Q6ZQY7 126 aa5.96□□□□□ -1.46
VAPB-201ENST00000265619 MUC7Q8TAX7 377 aa5.96□□□□□ -1.46
VAPB-201ENST00000265619 TRGV2A0A075B6R0 118 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 hDV103S1A0JD37 113 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 CYSRT1A8MQ03 144 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 DEFB114Q30KQ6 69 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 MAP6D1Q9H9H5 199 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 PRR4Q16378 134 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 CELA1Q9UNI1 258 aa5.95□□□□□ -1.46
VAPB-201ENST00000265619 IGKV4-1P06312 121 aa5.94□□□□□ -1.46
VAPB-201ENST00000265619 C1orf64Q8NEQ6 169 aa5.94□□□□□ -1.46
VAPB-201ENST00000265619 PKD1L1Q8TDX9 2849 aa5.94□□□□□ -1.46
VAPB-201ENST00000265619 ANK3Q12955 4377 aaKnown RBP5.93□□□□□ -1.46
VAPB-201ENST00000265619 A0A096LPF7 62 aa5.93□□□□□ -1.46
VAPB-201ENST00000265619 KRTAP10-3P60369 221 aa5.93□□□□□ -1.46
VAPB-201ENST00000265619 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
VAPB-201ENST00000265619 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
VAPB-201ENST00000265619 FAM30AQ9NZY2 134 aa5.92□□□□□ -1.46
VAPB-201ENST00000265619 TRAV22A0A0B4J277 110 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms