RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 TTC28Q96AY4 2481 aa12.35□□□□□ -0.43
COL5A3-201ENST00000264828 TET2Q6N021 2002 aaPredicted RBP12.34□□□□□ -0.43
COL5A3-201ENST00000264828 SRCAPQ6ZRS2 3230 aa12.33□□□□□ -0.44
COL5A3-201ENST00000264828 IGLV5-45A0A087WSX0 123 aa12.32□□□□□ -0.44
COL5A3-201ENST00000264828 NAV2Q8IVL1 2488 aa12.31□□□□□ -0.44
COL5A3-201ENST00000264828 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
COL5A3-201ENST00000264828 ATP11AUNQ6ZP68 121 aa12.3□□□□□ -0.44
COL5A3-201ENST00000264828 CACNA1AO00555 2505 aa12.29□□□□□ -0.44
COL5A3-201ENST00000264828 LOC110117498A0A087WWA1 95 aa12.29□□□□□ -0.44
COL5A3-201ENST00000264828 Q6ZRX8 168 aa12.29□□□□□ -0.44
COL5A3-201ENST00000264828 EPM2AB3EWF7 344 aa12.28□□□□□ -0.44
COL5A3-201ENST00000264828 Q8NBF4 154 aa12.28□□□□□ -0.44
COL5A3-201ENST00000264828 BCE1O60756 84 aa12.27□□□□□ -0.44
COL5A3-201ENST00000264828 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.45
COL5A3-201ENST00000264828 LINC00313P59037 77 aa12.26□□□□□ -0.45
COL5A3-201ENST00000264828 TRAV22A0A0B4J277 110 aa12.25□□□□□ -0.45
COL5A3-201ENST00000264828 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
COL5A3-201ENST00000264828 RPS28P62857 69 aaKnown RBP12.24□□□□□ -0.45
COL5A3-201ENST00000264828 COL27A1Q8IZC6 1860 aaPredicted RBP12.24□□□□□ -0.45
COL5A3-201ENST00000264828 SPINT4Q6UDR6 99 aa12.23□□□□□ -0.45
COL5A3-201ENST00000264828 MUC4Q99102 2169 aa12.23□□□□□ -0.45
COL5A3-201ENST00000264828 CCDC168Q8NDH2 2452 aa12.22□□□□□ -0.45
COL5A3-201ENST00000264828 RTL8CO15255 209 aa12.2□□□□□ -0.46
COL5A3-201ENST00000264828 PIEZO2Q9H5I5 2752 aa12.2□□□□□ -0.46
COL5A3-201ENST00000264828 C8orf87E5RJ46 101 aa12.2□□□□□ -0.46
COL5A3-201ENST00000264828 H3BPC8 53 aa12.19□□□□□ -0.46
COL5A3-201ENST00000264828 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
COL5A3-201ENST00000264828 Q96NJ1 140 aa12.18□□□□□ -0.46
COL5A3-201ENST00000264828 A0A1B0GW54 56 aa12.18□□□□□ -0.46
COL5A3-201ENST00000264828 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
COL5A3-201ENST00000264828 PTPRBP23467 1997 aa12.17□□□□□ -0.46
COL5A3-201ENST00000264828 Q6ZRP5 223 aa12.16□□□□□ -0.46
COL5A3-201ENST00000264828 TRBV7-4A0A0J9YYF1 115 aa12.16□□□□□ -0.46
COL5A3-201ENST00000264828 C16orf90A8MZG2 172 aa12.16□□□□□ -0.46
COL5A3-201ENST00000264828 K7EQZ3 153 aa12.16□□□□□ -0.46
COL5A3-201ENST00000264828 LITAFQ99732 161 aa12.16□□□□□ -0.46
COL5A3-201ENST00000264828 PCSK5Q92824 1860 aa12.15□□□□□ -0.46
COL5A3-201ENST00000264828 LINC00588Q9Y4M8 146 aa12.14□□□□□ -0.47
COL5A3-201ENST00000264828 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
COL5A3-201ENST00000264828 H3BNG1 76 aa12.13□□□□□ -0.47
COL5A3-201ENST00000264828 KRTAP24-1Q3LI83 254 aa12.13□□□□□ -0.47
COL5A3-201ENST00000264828 A8MUN3 132 aa12.12□□□□□ -0.47
COL5A3-201ENST00000264828 COA5Q86WW8 74 aa12.11□□□□□ -0.47
COL5A3-201ENST00000264828 SSBP3-AS1Q7Z2R9 100 aa12.11□□□□□ -0.47
COL5A3-201ENST00000264828 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
COL5A3-201ENST00000264828 NBDYA0A0U1RRE5 68 aa12.09□□□□□ -0.47
COL5A3-201ENST00000264828 A8MWP4 228 aa12.09□□□□□ -0.47
COL5A3-201ENST00000264828 Q8NAQ8 132 aa12.09□□□□□ -0.47
COL5A3-201ENST00000264828 IGLV6-57P01721 117 aa12.08□□□□□ -0.48
COL5A3-201ENST00000264828 IGF2RP11717 2491 aa12.08□□□□□ -0.48
COL5A3-201ENST00000264828 VPREB1P12018 145 aa12.07□□□□□ -0.48
COL5A3-201ENST00000264828 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
COL5A3-201ENST00000264828 DOPEY1Q5JWR5 2465 aa12.07□□□□□ -0.48
COL5A3-201ENST00000264828 LOC101927531A0A1B0GV80 90 aa12.06□□□□□ -0.48
COL5A3-201ENST00000264828 MRPL34Q9BQ48 92 aaKnown RBP12.04□□□□□ -0.48
COL5A3-201ENST00000264828 FAM229AH3BQW9 127 aa12.03□□□□□ -0.48
COL5A3-201ENST00000264828 DSCR10P59022 87 aa12□□□□□ -0.49
COL5A3-201ENST00000264828 NCOR2Q9Y618 2525 aa11.99□□□□□ -0.49
COL5A3-201ENST00000264828 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
COL5A3-201ENST00000264828 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
COL5A3-201ENST00000264828 APLNQ9ULZ1 77 aa11.98□□□□□ -0.49
COL5A3-201ENST00000264828 A0A0G2JQZ4 141 aa11.97□□□□□ -0.49
COL5A3-201ENST00000264828 A0A1W2PNN7 141 aa11.97□□□□□ -0.49
COL5A3-201ENST00000264828 IGFL1Q6UW32 110 aa11.97□□□□□ -0.49
COL5A3-201ENST00000264828 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
COL5A3-201ENST00000264828 MYO9AB2RTY4 2548 aa11.94□□□□□ -0.5
COL5A3-201ENST00000264828 UQCR11O14957 56 aa11.94□□□□□ -0.5
COL5A3-201ENST00000264828 DNAH10OSP0CZ25 163 aa11.94□□□□□ -0.5
COL5A3-201ENST00000264828 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
COL5A3-201ENST00000264828 KCNQ1DNQ9H478 68 aa11.92□□□□□ -0.5
COL5A3-201ENST00000264828 MIR22HGQ0VDD5 57 aa11.91□□□□□ -0.5
COL5A3-201ENST00000264828 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
COL5A3-201ENST00000264828 C8orf17Q9NRJ1 99 aa11.91□□□□□ -0.5
COL5A3-201ENST00000264828 C9orf92A6NGG3 77 aa11.9□□□□□ -0.51
COL5A3-201ENST00000264828 WDR87Q6ZQQ6 2873 aa11.88□□□□□ -0.51
COL5A3-201ENST00000264828 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
COL5A3-201ENST00000264828 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
COL5A3-201ENST00000264828 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
COL5A3-201ENST00000264828 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
COL5A3-201ENST00000264828 Q8N377 158 aa11.85□□□□□ -0.51
COL5A3-201ENST00000264828 C9orf129Q5T035 196 aaKnown RBP11.85□□□□□ -0.51
COL5A3-201ENST00000264828 C15orf56Q8N910 161 aa11.85□□□□□ -0.51
COL5A3-201ENST00000264828 CSNK1G2-AS1Q8NCQ2 148 aa11.85□□□□□ -0.51
COL5A3-201ENST00000264828 LINC00336Q6ZUF6 198 aa11.84□□□□□ -0.51
COL5A3-201ENST00000264828 CRIPTQ9P021 101 aa11.84□□□□□ -0.51
COL5A3-201ENST00000264828 KRTAP10-11P60412 298 aa11.83□□□□□ -0.52
COL5A3-201ENST00000264828 A0A1B0GVX0 72 aa11.83□□□□□ -0.52
COL5A3-201ENST00000264828 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
COL5A3-201ENST00000264828 KLKP1Q107X0 134 aa11.82□□□□□ -0.52
COL5A3-201ENST00000264828 ANAPC11Q9NYG5 84 aa11.82□□□□□ -0.52
COL5A3-201ENST00000264828 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
COL5A3-201ENST00000264828 H7BZZ5 65 aa11.79□□□□□ -0.52
COL5A3-201ENST00000264828 ABCA12Q86UK0 2595 aa11.79□□□□□ -0.52
COL5A3-201ENST00000264828 COX6B2Q6YFQ2 88 aa11.79□□□□□ -0.52
COL5A3-201ENST00000264828 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
COL5A3-201ENST00000264828 TLN1Q9Y490 2541 aaKnown RBP11.77□□□□□ -0.53
COL5A3-201ENST00000264828 J3QL48 77 aa11.77□□□□□ -0.53
COL5A3-201ENST00000264828 LINC00304Q8N9R0 145 aa11.76□□□□□ -0.53
COL5A3-201ENST00000264828 WWC2-AS2Q96NR7 200 aa11.75□□□□□ -0.53
COL5A3-201ENST00000264828 A0A096LNT2 108 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms