RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 FP248Q71RG6 208 aaPredicted RBP13.13□□□□□ -0.31
COL4A3BP-201ENST00000261415 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
COL4A3BP-201ENST00000261415 CCKP06307 115 aa13.13□□□□□ -0.31
COL4A3BP-201ENST00000261415 TRAV7A0A075B6U4 112 aa13.12□□□□□ -0.31
COL4A3BP-201ENST00000261415 CRPP02741 224 aa13.12□□□□□ -0.31
COL4A3BP-201ENST00000261415 DAD1P61803 113 aa13.12□□□□□ -0.31
COL4A3BP-201ENST00000261415 KLKP1Q107X0 134 aa13.12□□□□□ -0.31
COL4A3BP-201ENST00000261415 C9orf129Q5T035 196 aaKnown RBP13.11□□□□□ -0.31
COL4A3BP-201ENST00000261415 MEGF8Q7Z7M0 2845 aa13.11□□□□□ -0.31
COL4A3BP-201ENST00000261415 LYPD5Q6UWN5 251 aa13.11□□□□□ -0.31
COL4A3BP-201ENST00000261415 TRGV4A0A0C4DH28 118 aa13.1□□□□□ -0.31
COL4A3BP-201ENST00000261415 B9D2Q9BPU9 175 aa13.1□□□□□ -0.31
COL4A3BP-201ENST00000261415 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
COL4A3BP-201ENST00000261415 Q9UF83 564 aa13.1□□□□□ -0.31
COL4A3BP-201ENST00000261415 A0A0U1RRA0 63 aa13.09□□□□□ -0.31
COL4A3BP-201ENST00000261415 K7EQD1 137 aa13.09□□□□□ -0.31
COL4A3BP-201ENST00000261415 BRK1Q8WUW1 75 aa13.09□□□□□ -0.31
COL4A3BP-201ENST00000261415 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
COL4A3BP-201ENST00000261415 ATP5EP56381 51 aaPredicted RBP13.08□□□□□ -0.32
COL4A3BP-201ENST00000261415 A0A087WYN8 130 aa13.08□□□□□ -0.32
COL4A3BP-201ENST00000261415 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
COL4A3BP-201ENST00000261415 TRBV6-4A0A1B0GX49 114 aa13.06□□□□□ -0.32
COL4A3BP-201ENST00000261415 NDUFC1O43677 76 aa13.06□□□□□ -0.32
COL4A3BP-201ENST00000261415 CHCHD7Q9BUK0 85 aa13.06□□□□□ -0.32
COL4A3BP-201ENST00000261415 NCR3O14931 201 aa13.06□□□□□ -0.32
COL4A3BP-201ENST00000261415 TRBV10-1A0A0K0K1A3 114 aa13.05□□□□□ -0.32
COL4A3BP-201ENST00000261415 JMJD7-PLA2G4BH0Y9G9 81 aa13.05□□□□□ -0.32
COL4A3BP-201ENST00000261415 ENHOQ6UWT2 76 aa13.05□□□□□ -0.32
COL4A3BP-201ENST00000261415 FAM19A1Q7Z5A9 133 aa13.04□□□□□ -0.32
COL4A3BP-201ENST00000261415 UBL5Q9BZL1 73 aa13.03□□□□□ -0.32
COL4A3BP-201ENST00000261415 ORMDL1Q9P0S3 153 aa13.03□□□□□ -0.32
COL4A3BP-201ENST00000261415 PRO0255Q9UI72 69 aa13.02□□□□□ -0.32
COL4A3BP-201ENST00000261415 LOC100131303A0A0U1RQF7 123 aa13.02□□□□□ -0.33
COL4A3BP-201ENST00000261415 RPL36AP83881 106 aaKnown RBP13.02□□□□□ -0.33
COL4A3BP-201ENST00000261415 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.33
COL4A3BP-201ENST00000261415 SMIM11BQ8TCY0 68 aa13.02□□□□□ -0.33
COL4A3BP-201ENST00000261415 RPL36ALQ969Q0 106 aaKnown RBP13.02□□□□□ -0.33
COL4A3BP-201ENST00000261415 TRBV7-6A0A0J9YX20 115 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 A0A0U1RQV1 116 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 LECT2O14960 151 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 HTN3P15516 51 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 IGKV2-29A2NJV5 120 aaPredicted RBP13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 RBM3P98179 157 aaKnown RBP13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 Q6ZTC4 211 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 LINC00337Q8N6G1 96 aa13.01□□□□□ -0.33
COL4A3BP-201ENST00000261415 SMIM1B2RUZ4 78 aa13□□□□□ -0.33
COL4A3BP-201ENST00000261415 DGAT2L7PQ6IED9 249 aa13□□□□□ -0.33
COL4A3BP-201ENST00000261415 MIR7-3HGQ8N6C7 128 aa13□□□□□ -0.33
COL4A3BP-201ENST00000261415 STAB2Q8WWQ8 2551 aa13□□□□□ -0.33
COL4A3BP-201ENST00000261415 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
COL4A3BP-201ENST00000261415 COX6A2Q02221 97 aa13□□□□□ -0.33
COL4A3BP-201ENST00000261415 F8WEM9 126 aa12.98□□□□□ -0.33
COL4A3BP-201ENST00000261415 PAX4O43316 350 aa12.98□□□□□ -0.33
COL4A3BP-201ENST00000261415 LINC00242Q5T6M2 205 aa12.98□□□□□ -0.33
COL4A3BP-201ENST00000261415 SND1-IT1Q9HBX3 110 aa12.98□□□□□ -0.33
COL4A3BP-201ENST00000261415 IGHV3-38A0A0C4DH36 116 aa12.97□□□□□ -0.33
COL4A3BP-201ENST00000261415 GYPEP15421 78 aa12.97□□□□□ -0.33
COL4A3BP-201ENST00000261415 IGKV2-28A0A075B6P5 120 aa12.97□□□□□ -0.33
COL4A3BP-201ENST00000261415 IGKV2D-28P01615 120 aa12.97□□□□□ -0.33
COL4A3BP-201ENST00000261415 LINC00474Q9P2X8 69 aa12.96□□□□□ -0.34
COL4A3BP-201ENST00000261415 SS18Q15532 418 aa12.95□□□□□ -0.34
COL4A3BP-201ENST00000261415 RMI2Q96E14 147 aa12.93□□□□□ -0.34
COL4A3BP-201ENST00000261415 DEFB131BA0A096LNP1 70 aa12.92□□□□□ -0.34
COL4A3BP-201ENST00000261415 SNURFQ9Y675 71 aa12.92□□□□□ -0.34
COL4A3BP-201ENST00000261415 TMEM256-PLSCR3K7ERE1 68 aa12.91□□□□□ -0.34
COL4A3BP-201ENST00000261415 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
COL4A3BP-201ENST00000261415 SLPIP03973 132 aa12.9□□□□□ -0.34
COL4A3BP-201ENST00000261415 LAMTOR3Q9UHA4 124 aa12.9□□□□□ -0.34
COL4A3BP-201ENST00000261415 NTM-AS1Q6ZSK4 140 aa12.9□□□□□ -0.35
COL4A3BP-201ENST00000261415 A0A096LPF7 62 aa12.89□□□□□ -0.35
COL4A3BP-201ENST00000261415 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
COL4A3BP-201ENST00000261415 H3BNG1 76 aa12.88□□□□□ -0.35
COL4A3BP-201ENST00000261415 FBN3Q75N90 2809 aa12.88□□□□□ -0.35
COL4A3BP-201ENST00000261415 C6orf226Q5I0X4 101 aa12.87□□□□□ -0.35
COL4A3BP-201ENST00000261415 PMAIP1Q13794 54 aa12.85□□□□□ -0.35
COL4A3BP-201ENST00000261415 TRBV6-8A0A0A6YYG3 113 aa12.85□□□□□ -0.35
COL4A3BP-201ENST00000261415 IBA57-AS1B1ANH7 110 aa12.83□□□□□ -0.35
COL4A3BP-201ENST00000261415 CCL18P55774 89 aa12.83□□□□□ -0.35
COL4A3BP-201ENST00000261415 LINC00158P58513 81 aa12.83□□□□□ -0.36
COL4A3BP-201ENST00000261415 PRR15Q8IV56 129 aa12.82□□□□□ -0.36
COL4A3BP-201ENST00000261415 LINC01547P58512 204 aaPredicted RBP12.81□□□□□ -0.36
COL4A3BP-201ENST00000261415 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
COL4A3BP-201ENST00000261415 CXCL6P80162 114 aa12.81□□□□□ -0.36
COL4A3BP-201ENST00000261415 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
COL4A3BP-201ENST00000261415 Q8N814 137 aa12.8□□□□□ -0.36
COL4A3BP-201ENST00000261415 ERC2-IT1O76042 136 aa12.79□□□□□ -0.36
COL4A3BP-201ENST00000261415 MPLKIPQ8TAP9 179 aa12.79□□□□□ -0.36
COL4A3BP-201ENST00000261415 UBE2L6O14933 153 aa12.79□□□□□ -0.36
COL4A3BP-201ENST00000261415 DNAH7Q8WXX0 4024 aa12.78□□□□□ -0.36
COL4A3BP-201ENST00000261415 CSMD3Q7Z407 3707 aa12.77□□□□□ -0.36
COL4A3BP-201ENST00000261415 Q6ZRU5 148 aa12.77□□□□□ -0.36
COL4A3BP-201ENST00000261415 TGP01266 2768 aa12.77□□□□□ -0.37
COL4A3BP-201ENST00000261415 ESRGQ1W209 222 aa12.77□□□□□ -0.37
COL4A3BP-201ENST00000261415 HAMPP81172 84 aa12.76□□□□□ -0.37
COL4A3BP-201ENST00000261415 CDC42SE2Q9NRR3 84 aa12.76□□□□□ -0.37
COL4A3BP-201ENST00000261415 LOC110117498A0A087WWA1 95 aa12.76□□□□□ -0.37
COL4A3BP-201ENST00000261415 LELP1Q5T871 98 aa12.76□□□□□ -0.37
COL4A3BP-201ENST00000261415 Q6ZQT0 140 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms